Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28e05
(406 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 81 6e-17
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 5e-05
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 40 2e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.010
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 32 0.029
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.090
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.27
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 29 0.36
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.36
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 28 0.63
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 27 0.84
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 27 1.5
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 3.4
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 25 3.4
SPBC19C2.07 |fba1||fructose-bisphosphate aldolase Fba1|Schizosac... 24 7.8
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 24 7.8
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 81.0 bits (191), Expect = 6e-17
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +2
Query: 170 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 319
RYKGI + F R E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 70 RYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 50.0 bits (114), Expect = 1e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +1
Query: 46 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 141
F DF+ GG+SAAVSKTA APIERVKLL+Q Q
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQ 58
Score = 29.1 bits (62), Expect = 0.27
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 167 QRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 328
+++ G+VD + + + GL +RG +V+ + L F D K V L G
Sbjct: 173 RQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG 226
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 5e-05
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +1
Query: 61 LAGGISAAVSKTAVAPIERVKLLLQVQH 144
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 39.5 bits (88), Expect = 2e-04
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 167 QRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 313
+ Y + V+I +GL+ F+RGN N +R FP A+ FA + KQ
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
Score = 30.3 bits (65), Expect = 0.12
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 173 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 289
YK I A I K +G+ F+RG +N+++ P ++ +
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.5 bits (88), Expect = 2e-04
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 52 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAAPALQGYRRCLR 198
K +AGG + V+K+ VAP++RVK+L Q H S + A + G + ++
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRHGLYKAIK 67
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.010
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 34 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 132
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 33.1 bits (72), Expect = 0.017
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +2
Query: 164 PQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 313
P Y G +D F + K +G ++G N+++ P+ A+++ + K+
Sbjct: 372 PATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKK 421
Score = 27.1 bits (57), Expect = 1.1
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +1
Query: 58 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 153
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 32.3 bits (70), Expect = 0.029
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 173 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 319
Y G D +I K +G +RG ++ P +AL FA D Y +++
Sbjct: 45 YNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Score = 28.3 bits (60), Expect = 0.48
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 170 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 310
+Y G VD F +I K++ +L+ + G A + R+ A F K +
Sbjct: 140 KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIR 186
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.090
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 37 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 141
PV + +++G IS + V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 27.5 bits (58), Expect = 0.84
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 43 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQ 141
+F KDFLA G+S V++ V P + VK+ LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.27
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 61 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 150
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
Score = 26.6 bits (56), Expect = 1.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 164 PQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 271
P YK D F+ I + G+ +RG ++++ P
Sbjct: 224 PSNYKSFKDCFLSIYRNSGIKGLYRGLSVSMLKVAP 259
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 28.7 bits (61), Expect = 0.36
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +2
Query: 170 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 289
+Y G++ F + EQG++ + G A+++R P + F
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
Score = 27.9 bits (59), Expect = 0.63
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 1 ITXSNKMSXLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 135
+T +N S P + F+AGG++ + A AP++ VK LQ
Sbjct: 34 LTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.7 bits (61), Expect = 0.36
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 173 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQF 349
Y DAF +I K +GL +F+RG F ++ + F + +K KK+ F
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGKKSNF 287
Score = 27.9 bits (59), Expect = 0.63
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 52 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 141
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
Score = 26.6 bits (56), Expect = 1.5
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +2
Query: 179 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 340
G + + I +G+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 53 GTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 27.9 bits (59), Expect = 0.63
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +1
Query: 61 LAGGISAAVSKTAVAPIERVKLLLQVQ 141
++GG+S A++ + P++ VK LLQ +
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTR 235
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 27.5 bits (58), Expect = 0.84
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 3/59 (5%)
Frame = +2
Query: 176 KGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP---TQALNFAFKDKYKQVFLGGVDKKT 343
K + D + G + FW G F + + F AL VF G+D+KT
Sbjct: 212 KSLRDGTIVSADSSGAVKFWNGKFFTLSQSFKLHLADALCLGVSANGDMVFSSGIDRKT 270
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 26.6 bits (56), Expect = 1.5
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +2
Query: 167 QRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 316
+ YK + +I + GLL FW G + R + + F +K ++
Sbjct: 238 KEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 3.4
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 182 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 274
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 58 FLAGGISAAVSKTAVAPIERVKLLLQVQ 141
FL+GG++A + T P E +K Q+Q
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQ 54
>SPBC19C2.07 |fba1||fructose-bisphosphate aldolase
Fba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 358
Score = 24.2 bits (50), Expect = 7.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 52 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAAPALQGYRRCLRPYPQGAGSP 225
K +AG I+AA ++AP V +++ H +K++ P + G Y + G P
Sbjct: 79 KASIAGSIAAAHYIRSIAPFFGVPVVMHSDHCAKKL-LPWMDGMFEADEAYFKIHGEP 135
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 24.2 bits (50), Expect = 7.8
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +2
Query: 164 PQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD--KYKQVFLGGVDK 337
P Y G + F I ++GL + G +I Y + F + K+K L G K
Sbjct: 55 PNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQK 114
Query: 338 KTQF 349
++
Sbjct: 115 AHEY 118
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,245,215
Number of Sequences: 5004
Number of extensions: 20657
Number of successful extensions: 94
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 138190552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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