Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28e02
         (522 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    25   0.54 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    24   0.94 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   5.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   8.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.7  

>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 298 IRTDPLPSRNTSCAKIFALSW 236
           IRT  LP + T C K F+  W
Sbjct: 1   IRTHTLPCKCTICPKAFSRPW 21


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 394 IREEIRTNQNRTSDNFMNINIRHKPV 317
           I E IRT  N+ S  ++ I I H+PV
Sbjct: 51  IFERIRTIYNQFSTPYVGIYIFHQPV 76


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 111 HLQWRWQITLNKDILS 158
           H QW+WQ+ +    LS
Sbjct: 177 HPQWKWQVYMTLVSLS 192


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 446 YDIFIDNRFVVFMKVKIYKRRNPDKPE 366
           YDI   N+ V F+ +  Y     D+P+
Sbjct: 185 YDIPEINKVVDFINIMSYDYHTADQPQ 211


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -3

Query: 76  IPFLIYYVFFYLSCNNTVS 20
           +PF IY++F ++     +S
Sbjct: 54  LPFAIYHIFMHIVPTKLIS 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,949
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)