Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28e02
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p pro...    31   0.95 
AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA...    31   0.95 
AY118589-1|AAM49958.1|  941|Drosophila melanogaster LD45221p pro...    28   6.7  
AE013599-3618|AAF47019.2|  941|Drosophila melanogaster CG5360-PA...    28   6.7  

>AY071510-1|AAL49132.1|  916|Drosophila melanogaster RE56564p
           protein.
          Length = 916

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 189 MLFLSNLSPNRMHGKYHDRAKIFAQLVFLLGRGSVRMFLFRTY 317
           +LF++++S  R+H   HDR+K   Q+V  L   +V MF   T+
Sbjct: 819 LLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTF 861


>AE014298-760|AAF46050.1|  916|Drosophila melanogaster CG11473-PA
           protein.
          Length = 916

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +3

Query: 189 MLFLSNLSPNRMHGKYHDRAKIFAQLVFLLGRGSVRMFLFRTY 317
           +LF++++S  R+H   HDR+K   Q+V  L   +V MF   T+
Sbjct: 819 LLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTF 861


>AY118589-1|AAM49958.1|  941|Drosophila melanogaster LD45221p
           protein.
          Length = 941

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 327 INRYKF*TRTFGLTLFRAETPAVRRSSPYRGIFHAFY 217
           +N+  + ++   L L   E PAVRR SP + +F  FY
Sbjct: 83  VNKRLYGSQLQNLKLPEVEPPAVRRPSPGKIVFPRFY 119


>AE013599-3618|AAF47019.2|  941|Drosophila melanogaster CG5360-PA
           protein.
          Length = 941

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 327 INRYKF*TRTFGLTLFRAETPAVRRSSPYRGIFHAFY 217
           +N+  + ++   L L   E PAVRR SP + +F  FY
Sbjct: 83  VNKRLYGSQLQNLKLPEVEPPAVRRPSPGKIVFPRFY 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,746,818
Number of Sequences: 53049
Number of extensions: 432408
Number of successful extensions: 762
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)