Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28d15
(376 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4QBM6 Cluster: Putative uncharacterized protein; n=3; ... 34 0.98
UniRef50_Q1IBR9 Cluster: Putative uncharacterized protein; n=4; ... 33 2.3
UniRef50_Q8S756 Cluster: Putative uncharacterized protein OSJNBb... 33 2.3
UniRef50_Q9HA91 Cluster: CDNA FLJ12056 fis, clone HEMBB1002050; ... 33 2.3
UniRef50_Q8YP45 Cluster: All4355 protein; n=6; Cyanobacteria|Rep... 32 3.0
UniRef50_Q54342 Cluster: Beta-galactosidase precursor; n=2; Stre... 32 3.0
UniRef50_Q1LVK4 Cluster: Novel fork head domain containing prote... 32 3.9
UniRef50_Q39DV3 Cluster: Putative uncharacterized protein; n=13;... 32 3.9
UniRef50_A3ZXM7 Cluster: Polyprenyl synthase; n=1; Blastopirellu... 31 6.9
UniRef50_Q9ZQE2 Cluster: Putative non-LTR retroelement reverse t... 31 6.9
UniRef50_A5UNZ4 Cluster: Predicted transporter; n=1; Methanobrev... 31 6.9
UniRef50_Q3TAA5 Cluster: Activated spleen cDNA, RIKEN full-lengt... 31 9.1
UniRef50_Q73SH2 Cluster: EchA3; n=1; Mycobacterium avium subsp. ... 31 9.1
UniRef50_Q2IPF4 Cluster: Putative uncharacterized protein precur... 31 9.1
UniRef50_Q3W3J5 Cluster: Putative uncharacterized protein; n=1; ... 31 9.1
UniRef50_Q0LBZ4 Cluster: TPR repeat; n=1; Herpetosiphon aurantia... 31 9.1
UniRef50_Q7QSH5 Cluster: GLP_64_19321_19980; n=1; Giardia lambli... 31 9.1
UniRef50_Q6ZUQ1 Cluster: CDNA FLJ43465 fis, clone OCBBF2036476; ... 31 9.1
>UniRef50_Q4QBM6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1683
Score = 33.9 bits (74), Expect = 0.98
Identities = 18/43 (41%), Positives = 21/43 (48%)
Frame = +3
Query: 84 AYSCARAALPASDGPATPSSGRATVRGVFTHDRHSSTASCSTS 212
A S RA LPAS GP+ SG G H +S+ CS S
Sbjct: 534 ASSPTRARLPASPGPSRSGSGSHAADGCLPHSSCNSSCVCSKS 576
>UniRef50_Q1IBR9 Cluster: Putative uncharacterized protein; n=4;
Pseudomonas|Rep: Putative uncharacterized protein -
Pseudomonas entomophila (strain L48)
Length = 101
Score = 32.7 bits (71), Expect = 2.3
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 86 LFLCTGCAARIGRARDPQQWEGYGT 160
L CTGC + GR D +QW YGT
Sbjct: 52 LACCTGCQSPDGRQADLEQWHRYGT 76
>UniRef50_Q8S756 Cluster: Putative uncharacterized protein
OSJNBb0081F12.12; n=1; Oryza sativa|Rep: Putative
uncharacterized protein OSJNBb0081F12.12 - Oryza sativa
(Rice)
Length = 198
Score = 32.7 bits (71), Expect = 2.3
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 38 YCRYKTFLYNT-TFLSSLFLCTGCAARIGRARDPQQWEGYGTWRLHTRPPL 187
Y + TFL + + LSSL L +G A D + W G GT+ PPL
Sbjct: 86 YLNFDTFLKSRPSSLSSLCLTRTVVVAVGVAVDDEAWRGAGTFPSLAAPPL 136
>UniRef50_Q9HA91 Cluster: CDNA FLJ12056 fis, clone HEMBB1002050;
n=1; Homo sapiens|Rep: CDNA FLJ12056 fis, clone
HEMBB1002050 - Homo sapiens (Human)
Length = 220
Score = 32.7 bits (71), Expect = 2.3
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 90 SCARAALPASDGPA-TPSSGRATVRGVFTHDRHSSTASCS 206
S RAALP S PA TP+ R+ R T R +T SCS
Sbjct: 168 SPGRAALPRSPRPALTPAPARSPTRRQSTRRRSGATTSCS 207
>UniRef50_Q8YP45 Cluster: All4355 protein; n=6; Cyanobacteria|Rep:
All4355 protein - Anabaena sp. (strain PCC 7120)
Length = 207
Score = 32.3 bits (70), Expect = 3.0
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +2
Query: 2 ILTLNSEWNLSDYCRYKTFLYNTTFLSSLFLCTGCAARIGRARDPQQWEGYGTWRLHTRP 181
I+ + Y + + FL F ++ L AAR+ + + +QW+ +++ R
Sbjct: 107 IIEIEQRLKWKTYEQLQRFLRERRFPQAIALAEALAARLPKDPEVRQWQAI-AYQIWGRA 165
Query: 182 PLQHRQLLYKRSALSAATSTSPY 250
+ QLL R L A T P+
Sbjct: 166 LINENQLLKARVYLKKALKTDPH 188
>UniRef50_Q54342 Cluster: Beta-galactosidase precursor; n=2;
Streptomyces|Rep: Beta-galactosidase precursor -
Streptomyces lividans
Length = 143
Score = 32.3 bits (70), Expect = 3.0
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 77 LSSLFLCTGCAARIGRARDPQQWEGYGTWRLHTRPPLQHRQLL-YK--RSALSAATSTSP 247
LS+ L A R A +P +W +G +RL T+PP H L Y AL+ + SP
Sbjct: 41 LSASPLTAQAAVRRAAADEPPEWNDFGVFRLGTQPP--HATLTPYADVEQALAGDRARSP 98
Query: 248 Y 250
Y
Sbjct: 99 Y 99
>UniRef50_Q1LVK4 Cluster: Novel fork head domain containing protein;
n=3; Clupeocephala|Rep: Novel fork head domain
containing protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 379
Score = 31.9 bits (69), Expect = 3.9
Identities = 24/62 (38%), Positives = 33/62 (53%)
Frame = +3
Query: 111 PASDGPATPSSGRATVRGVFTHDRHSSTASCSTSEAPCPLPLLLRLIYAIHCSLNNFSLY 290
PA++ PSS AT G+ SS++S STS A PLPL + + L+N S Y
Sbjct: 259 PAAERLLIPSSQEATYYGMGCEQMTSSSSSFSTS-ASVPLPLSAPCSFNL---LSNQSSY 314
Query: 291 FH 296
F+
Sbjct: 315 FY 316
>UniRef50_Q39DV3 Cluster: Putative uncharacterized protein; n=13;
Bacteria|Rep: Putative uncharacterized protein -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 1360
Score = 31.9 bits (69), Expect = 3.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +3
Query: 117 SDGPATPSSGRATVRGVFTHDRHSSTASCSTSEAPCPLPL 236
+D T GR + GVF HD HSS + +T A PL L
Sbjct: 456 TDARVTAGKGRVDLTGVFRHDAHSSYDAKATLTAFDPLLL 495
>UniRef50_A3ZXM7 Cluster: Polyprenyl synthase; n=1; Blastopirellula
marina DSM 3645|Rep: Polyprenyl synthase -
Blastopirellula marina DSM 3645
Length = 309
Score = 31.1 bits (67), Expect = 6.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 ILTLNSEWNLSDYCRYKTFLYNTTFLSSLFLCTGCAAR-IGRA 127
+ T+NS WN FL++ F + L T CAAR IGR+
Sbjct: 83 LATVNSRWNNETSVLLGDFLFSHAFYLATMLPTTCAARMIGRS 125
>UniRef50_Q9ZQE2 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 444
Score = 31.1 bits (67), Expect = 6.9
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = +3
Query: 93 CARAALPASDGPATPSSGRATVRGVFTHDRHSSTASC 203
CARAA S G SSG A+V GVF + S SC
Sbjct: 24 CARAASSVSSGVRDGSSGVASVFGVFGNLDFSDHVSC 60
>UniRef50_A5UNZ4 Cluster: Predicted transporter; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Predicted
transporter - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 236
Score = 31.1 bits (67), Expect = 6.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 141 SGRATVRGVFTHDRHSSTASCSTSEAPCP 227
+G T+R HD++++TA+C APCP
Sbjct: 84 AGLFTIREWKVHDKNTTTATCLAVVAPCP 112
>UniRef50_Q3TAA5 Cluster: Activated spleen cDNA, RIKEN full-length
enriched library, clone:F830028C06 product:weakly
similar to VPS10 domain receptor protein SORCS; n=1; Mus
musculus|Rep: Activated spleen cDNA, RIKEN full-length
enriched library, clone:F830028C06 product:weakly
similar to VPS10 domain receptor protein SORCS - Mus
musculus (Mouse)
Length = 91
Score = 30.7 bits (66), Expect = 9.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 155 RSPPTAGGRGPVRCGQRSPCTGIG 84
R+ P A GRGP +R CTG+G
Sbjct: 38 RTEPGARGRGPAALEERGSCTGLG 61
>UniRef50_Q73SH2 Cluster: EchA3; n=1; Mycobacterium avium subsp.
paratuberculosis|Rep: EchA3 - Mycobacterium
paratuberculosis
Length = 430
Score = 30.7 bits (66), Expect = 9.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 95 CTGCAARIGRARDPQQWEG 151
C+GCAAR GRA +W G
Sbjct: 352 CSGCAARCGRATGTPRWSG 370
>UniRef50_Q2IPF4 Cluster: Putative uncharacterized protein
precursor; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
Putative uncharacterized protein precursor -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 130
Score = 30.7 bits (66), Expect = 9.1
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 15 TPSGI*VIIVDIKHSCTTQRF*VAYSCARAALPASDGPATPSSGRATVRGVFT-HDRHSS 191
+P G ++ + H T + F A + AR A + A+P++ RA RG F+ H+ H+
Sbjct: 61 SPHGTALVKCVVCHGSTGKDFTRAVAGARCAGCHAAEAASPAAARAGPRGCFSCHEPHAL 120
Query: 192 TASCST 209
TA+ T
Sbjct: 121 TATGET 126
>UniRef50_Q3W3J5 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 274
Score = 30.7 bits (66), Expect = 9.1
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 111 PASDGPATPSSGRATVRG-VFTHDRHSSTASCSTSEAPCP 227
P +D P P GRA+ G + TH RH S +PCP
Sbjct: 206 PLADAPFWP--GRASCSGTIHTHRRHGHARPSPRSASPCP 243
>UniRef50_Q0LBZ4 Cluster: TPR repeat; n=1; Herpetosiphon aurantiacus
ATCC 23779|Rep: TPR repeat - Herpetosiphon aurantiacus
ATCC 23779
Length = 776
Score = 30.7 bits (66), Expect = 9.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 98 TGCAARIGRARDPQQWEGYGTWRLHTRPPLQHRQLLYKRSA 220
+GC + R QW+G L T PPL+ RQLL + +A
Sbjct: 173 SGCQLLVTSRRS--QWQGTNLITLDTLPPLESRQLLQQLAA 211
>UniRef50_Q7QSH5 Cluster: GLP_64_19321_19980; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_19321_19980 - Giardia lamblia
ATCC 50803
Length = 219
Score = 30.7 bits (66), Expect = 9.1
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +3
Query: 87 YSCARAALPASDGPATPSSGRATVRGVFTHDRHSSTASCSTSEAPCPLPLLLRLIYAIHC 266
Y R A P S TP+ R+ GVF +D SS+ SC + +P Y +HC
Sbjct: 93 YLRRRYARPVS---CTPTEIRSHYAGVFGND--SSSESCISRFNELGVPKEFPAFYGVHC 147
Query: 267 SLNNFSLY---FHL 299
N +L FHL
Sbjct: 148 EQPNLALNARDFHL 161
>UniRef50_Q6ZUQ1 Cluster: CDNA FLJ43465 fis, clone OCBBF2036476;
n=1; Homo sapiens|Rep: CDNA FLJ43465 fis, clone
OCBBF2036476 - Homo sapiens (Human)
Length = 256
Score = 30.7 bits (66), Expect = 9.1
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +3
Query: 111 PASDGPATPSSGRATVRGVFTHD--RHSSTASCSTSEAPCPLPLL 239
P D A P+S R + R RH+S +SC T +PC LL
Sbjct: 63 PHQDPGAAPASARLSPRSQVRPQPLRHASGSSCCTCSSPCASTLL 107
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,530,563
Number of Sequences: 1657284
Number of extensions: 6492496
Number of successful extensions: 22401
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22383
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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