Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28d15
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   2.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.4  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    20   7.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   9.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    20   9.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    20   9.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    20   9.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.5  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 149  PPTAGGRGPVRCGQRSP 99
            PP +G  GP   G +SP
Sbjct: 1112 PPPSGSSGPGSTGSKSP 1128


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
          beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 71 LCCTRMFYIYNNHLDSTRS 15
          +CC  + + Y +++ STR+
Sbjct: 7  VCCLLLMFSYTDNVSSTRT 25


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +2

Query: 98  TGCAARIGRARDPQQWEGYGTWRLHTR 178
           +G  A +      Q  +G G W  HT+
Sbjct: 134 SGDIAGLRNKTHSQPMQGVGNWERHTK 160


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 201 CSTSEAPC 224
           C+T EAPC
Sbjct: 51  CATGEAPC 58


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 73  RCVVQECFISTIIT*IP 23
           +CV+ +CF S   T IP
Sbjct: 159 QCVLPDCFCSADGTRIP 175


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 73  RCVVQECFISTIIT*IP 23
           +CV+ +CF S   T IP
Sbjct: 166 QCVLPDCFCSADGTRIP 182


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 195 ASCSTSEAPCP 227
           A+C  S+ PCP
Sbjct: 44  AACLLSKGPCP 54


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -2

Query: 321 IEFIFLQASENIMKNYLVNNELHK*GEVEVAADRAL 214
           +++ FLQ  E +   YL +    K GE++ + ++ +
Sbjct: 271 LQWAFLQILEILALAYLCDKVQLKIGEIKYSVNKLI 306


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 136 GVAGPSDAGSAARA 95
           GVAGP   G A  A
Sbjct: 113 GVAGPEKGGGAGAA 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,016
Number of Sequences: 336
Number of extensions: 1635
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)