Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28d15
         (376 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding pr...    25   1.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   2.1  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   5.0  

>AY146739-1|AAO12099.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP29 protein.
          Length = 176

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 85  PIPVHGLRCPHRTGPRPPA 141
           P PV GLRC  RTG  P A
Sbjct: 33  PAPVEGLRC--RTGEGPSA 49


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 146 EGYGTWRLHTRPPLQHRQL 202
           EG   W   +RPP QH  L
Sbjct: 540 EGSQEWNSRSRPPQQHSML 558


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
 Frame = -1

Query: 163 PRTVALPLLG---VAGPSDAGSAA 101
           P   A P+ G   VAGP DAGS A
Sbjct: 81  PTPTASPVPGNMVVAGPIDAGSCA 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 367,074
Number of Sequences: 2352
Number of extensions: 6748
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 28804305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)