Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28d15
         (376 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-P...    28   3.4  
AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-P...    28   3.4  
U78177-1|AAB36950.1|  528|Drosophila melanogaster Klingon protein.     27   5.9  
AY060363-1|AAL25402.1|  545|Drosophila melanogaster LD10776p pro...    27   5.9  
AE014297-3243|AAF56071.1|  545|Drosophila melanogaster CG6669-PA...    27   5.9  

>AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-PH,
           isoform H protein.
          Length = 1704

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 81  VAYSCARAALPASDGPATPSSGRATVRGVFTHDRHSSTASCSTSEAPCPLP 233
           +AY+ A   + ++ G A PS   AT+          S+ S  +S  P P+P
Sbjct: 617 LAYNAATGTISSASGAALPSRLMATIASSPASSISLSSCSSPSSSPPPPVP 667


>AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-PD,
           isoform D protein.
          Length = 2063

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +3

Query: 81  VAYSCARAALPASDGPATPSSGRATVRGVFTHDRHSSTASCSTSEAPCPLP 233
           +AY+ A   + ++ G A PS   AT+          S+ S  +S  P P+P
Sbjct: 635 LAYNAATGTISSASGAALPSRLMATIASSPASSISLSSCSSPSSSPPPPVP 685


>U78177-1|AAB36950.1|  528|Drosophila melanogaster Klingon protein.
          Length = 528

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 158 TWRLHTRPPLQHRQLLYKR 214
           TW++ + PPL+  +LLY+R
Sbjct: 396 TWKIDSYPPLEEVRLLYRR 414


>AY060363-1|AAL25402.1|  545|Drosophila melanogaster LD10776p
           protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 158 TWRLHTRPPLQHRQLLYKR 214
           TW++ + PPL+  +LLY+R
Sbjct: 399 TWKIDSYPPLEEVRLLYRR 417


>AE014297-3243|AAF56071.1|  545|Drosophila melanogaster CG6669-PA
           protein.
          Length = 545

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 158 TWRLHTRPPLQHRQLLYKR 214
           TW++ + PPL+  +LLY+R
Sbjct: 399 TWKIDSYPPLEEVRLLYRR 417


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,707,779
Number of Sequences: 53049
Number of extensions: 311849
Number of successful extensions: 1014
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)