Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28d11
         (242 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   2.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   2.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   4.4  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   4.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    19   7.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   7.7  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    19   7.7  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 4/9 (44%), Positives = 9/9 (100%)
 Frame = -2

Query: 139 DIYWDCFSG 113
           D++W+C++G
Sbjct: 109 DVFWNCWNG 117


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 2.5
 Identities = 4/9 (44%), Positives = 9/9 (100%)
 Frame = -2

Query: 139 DIYWDCFSG 113
           D++W+C++G
Sbjct: 109 DVFWNCWNG 117


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 156 LYFIQPLIVLIYFH 197
           L+FI PLI+L+  +
Sbjct: 244 LFFIIPLIILLILY 257


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 42  ARRENETQNETKRLDAASQVFLKSP 116
           ARR+N T+  T  L A      K+P
Sbjct: 86  ARRKNATRESTATLKAWLNEHKKNP 110


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 19.0 bits (37), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 69  ETKRLDAASQVFLKSPL 119
           E +  DAAS V   +PL
Sbjct: 145 ENEEADAASNVISSTPL 161


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.0 bits (37), Expect = 7.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 171 PLIVLIYFHLN*LKSNVDLILKKK 242
           P+  LI+F       NVD I+ +K
Sbjct: 221 PIAFLIFFATLDFLDNVDTIMYEK 244


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 19.0 bits (37), Expect = 7.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 45  RRENETQNETKRLDAASQV 101
           RR  E +   KR++  SQ+
Sbjct: 208 RRAKERKQNKKRIEEKSQI 226


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,193
Number of Sequences: 336
Number of extensions: 953
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3642386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)