Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28d11
         (242 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   1.5  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   1.5  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   2.0  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/32 (25%), Positives = 16/32 (50%)
 Frame = -1

Query: 125 LFQWTF*KNLRSCVQALCFILCFIFSPRVATK 30
           +F+W F      CV   C ++ ++    ++TK
Sbjct: 262 IFRWVFLGQFIQCVMIWCSLVLYVAVTGLSTK 293


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
          protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 98 LRSCVQALCFILCFI 54
          L S V +LCF+LC I
Sbjct: 7  LLSAVLSLCFVLCVI 21


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 104 KNLRSCVQALCFILCF 57
           +N+ SCV  + F +CF
Sbjct: 528 ENVHSCVMPVIFAICF 543


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,198
Number of Sequences: 2352
Number of extensions: 3362
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11861721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)