Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28d11
         (242 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p pro...    31   0.21 
AY060725-1|AAL28273.1|  515|Drosophila melanogaster GH17414p pro...    31   0.21 
AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-P...    31   0.21 
AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p pro...    26   6.1  
AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,...    26   6.1  
AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,...    26   6.1  
BT001282-1|AAN71038.1|  491|Drosophila melanogaster AT07931p pro...    26   8.0  

>BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p protein.
          Length = 1040

 Score = 31.1 bits (67), Expect = 0.21
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +3

Query: 27   LLGGNARRENETQNETKRLDAASQVFL---KSPLKQSQ*ISTIIQRLYFIQPLIVLI 188
            L+  NA RE E + E  R    + V +   K+P    + + T+IQ L F  P +VLI
Sbjct: 896  LMRKNAAREREEERERARSALQADVVIGNPKTPETAPKLLQTVIQALPFESPAVVLI 952


>AY060725-1|AAL28273.1|  515|Drosophila melanogaster GH17414p
           protein.
          Length = 515

 Score = 31.1 bits (67), Expect = 0.21
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +3

Query: 27  LLGGNARRENETQNETKRLDAASQVFL---KSPLKQSQ*ISTIIQRLYFIQPLIVLI 188
           L+  NA RE E + E  R    + V +   K+P    + + T+IQ L F  P +VLI
Sbjct: 371 LMRKNAAREREEERERARSALQADVVIGNPKTPETAPKLLQTVIQALPFESPAVVLI 427


>AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-PA
            protein.
          Length = 1040

 Score = 31.1 bits (67), Expect = 0.21
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +3

Query: 27   LLGGNARRENETQNETKRLDAASQVFL---KSPLKQSQ*ISTIIQRLYFIQPLIVLI 188
            L+  NA RE E + E  R    + V +   K+P    + + T+IQ L F  P +VLI
Sbjct: 896  LMRKNAAREREEERERARSALQADVVIGNPKTPETAPKLLQTVIQALPFESPAVVLI 952


>AY128479-1|AAM75072.1| 1058|Drosophila melanogaster RE53774p
           protein.
          Length = 1058

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +3

Query: 9   ITQFTGLLGGNARRENETQNETKRLDAASQVFLKSPLK 122
           I+QF  L   N  REN  Q+  + L   SQ  LK PLK
Sbjct: 707 ISQFIVL---NVTRENLVQDSLRELQHYSQSDLKKPLK 741


>AE014296-225|AAF47475.2| 1058|Drosophila melanogaster CG9153-PB,
           isoform B protein.
          Length = 1058

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +3

Query: 9   ITQFTGLLGGNARRENETQNETKRLDAASQVFLKSPLK 122
           I+QF  L   N  REN  Q+  + L   SQ  LK PLK
Sbjct: 707 ISQFIVL---NVTRENLVQDSLRELQHYSQSDLKKPLK 741


>AE014296-224|AAF47474.2| 1058|Drosophila melanogaster CG9153-PA,
           isoform A protein.
          Length = 1058

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +3

Query: 9   ITQFTGLLGGNARRENETQNETKRLDAASQVFLKSPLK 122
           I+QF  L   N  REN  Q+  + L   SQ  LK PLK
Sbjct: 707 ISQFIVL---NVTRENLVQDSLRELQHYSQSDLKKPLK 741


>BT001282-1|AAN71038.1|  491|Drosophila melanogaster AT07931p
           protein.
          Length = 491

 Score = 25.8 bits (54), Expect = 8.0
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 24  GLLGGNARRENETQNETKRLDAASQVFLKSPLKQSQ 131
           G  GG+ RR+  ++++ +R D+ SQ    SP ++ Q
Sbjct: 142 GSPGGDRRRQQRSRSQNRRQDSPSQRRQLSPGRKRQ 177


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,106,013
Number of Sequences: 53049
Number of extensions: 133583
Number of successful extensions: 267
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)