Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28d09
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    24   3.9  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.9  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   8.9  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -1

Query: 626 PTPESMMCSSRLSGSALMRMLSSGFASSTPRSVSDIRRILSNA 498
           P+   +   +  +G       ++  A+STP S  ++RR+L++A
Sbjct: 36  PSSAGVPARTMATGGVKSAGTATKLATSTPVSTGEVRRMLADA 78


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 545 STPRSVSDIRRILSNASEPFEINSR 471
           S   S SD+ + +S A +P +IN++
Sbjct: 873 SQASSTSDLSKTISVAPDPIDINAK 897


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 496 DALDKIRLMSLTDRGVLEANPELSIRIKAEPDKRLL 603
           DAL K+R++ L+   + E +P L   ++  P+ RLL
Sbjct: 203 DALPKLRVLELSFNSLEELDPRL---LRHLPNLRLL 235


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,198
Number of Sequences: 2352
Number of extensions: 8757
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)