Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28d07
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein. 101 3e-21
BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase (ubi... 101 3e-21
AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase ubiq... 101 3e-21
AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase prot... 101 3e-21
AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone oxidore... 101 3e-21
AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein. 101 3e-21
AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase (ubi... 101 3e-21
Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic pro... 30 9.2
DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein. 30 9.2
BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 9.2
BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 9.2
BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli) p... 30 9.2
AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein in... 30 9.2
AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein in... 30 9.2
AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein ... 30 9.2
AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein. 30 9.2
AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein. 30 9.2
AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL... 30 9.2
AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein. 30 9.2
>BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein.
Length = 201
Score = 101 bits (241), Expect = 3e-21
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 276 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 446
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 447 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 626
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 627 QGIVLERSPYSDFVFLEAMYSQKFL 701
QG+VLERS +SDFVFLEAMY+Q F+
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFI 179
>BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa protein.
Length = 355
Score = 101 bits (241), Expect = 3e-21
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 276 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 446
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 447 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 626
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 627 QGIVLERSPYSDFVFLEAMYSQKFL 701
QG+VLERS +SDFVFLEAMY+Q F+
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFI 179
>AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase
ubiquinone 1 alpha subcomplex protein.
Length = 429
Score = 101 bits (241), Expect = 3e-21
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 276 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 446
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 447 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 626
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 627 QGIVLERSPYSDFVFLEAMYSQKFL 701
QG+VLERS +SDFVFLEAMY+Q F+
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFI 179
>AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase
protein.
Length = 354
Score = 101 bits (241), Expect = 3e-21
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 276 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 446
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 40 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 97
Query: 447 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 626
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 98 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 153
Query: 627 QGIVLERSPYSDFVFLEAMYSQKFL 701
QG+VLERS +SDFVFLEAMY+Q F+
Sbjct: 154 QGVVLERSIFSDFVFLEAMYNQGFI 178
>AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone
oxidoreductase 42 kDa subunit protein.
Length = 355
Score = 101 bits (241), Expect = 3e-21
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 276 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 446
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 447 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 626
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 627 QGIVLERSPYSDFVFLEAMYSQKFL 701
QG+VLERS +SDFVFLEAMY+Q F+
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFI 179
>AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 101 bits (241), Expect = 3e-21
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 276 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 446
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 41 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 98
Query: 447 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 626
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 99 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 154
Query: 627 QGIVLERSPYSDFVFLEAMYSQKFL 701
QG+VLERS +SDFVFLEAMY+Q F+
Sbjct: 155 QGVVLERSIFSDFVFLEAMYNQGFI 179
>AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor
variant protein.
Length = 241
Score = 101 bits (241), Expect = 3e-21
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Frame = +3
Query: 276 WLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHY---IR 446
W L D+ + R + S+VI V+G + GK A +A+ LG KHFPEA +HY
Sbjct: 46 WHFLLGDKASKRLTERSRVITVDGNICTGKGKLAKEIAEKLGFKHFPEAG--IHYPDSTT 103
Query: 447 PNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTG 626
+G L + + + +D N ++RL Q +Y +R QY DAL HL TG
Sbjct: 104 GDGKPLATDYNGNCSLEKFYDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTG 159
Query: 627 QGIVLERSPYSDFVFLEAMYSQKFL 701
QG+VLERS +SDFVFLEAMY+Q F+
Sbjct: 160 QGVVLERSIFSDFVFLEAMYNQGFI 184
>Y18418-1|CAB46271.1| 456|Homo sapiens erythrocyte cytosolic
protein of 54 kDa, ECP-54 protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>DQ469310-1|ABF13334.1| 386|Homo sapiens RUVBL1-FK protein.
Length = 386
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>BT007057-1|AAP35706.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>BC012886-1|AAH12886.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>BC002993-1|AAH02993.1| 456|Homo sapiens RuvB-like 1 (E. coli)
protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>AK222575-1|BAD96295.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>AK222563-1|BAD96283.1| 456|Homo sapiens TATA binding protein
interacting protein 49 kDa variant protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>AJ010058-1|CAA08986.1| 456|Homo sapiens Nuclear matrix protein
NMP238 protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>AF380344-1|AAM45570.1| 456|Homo sapiens pontin 52 protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>AF099084-1|AAD04427.1| 456|Homo sapiens Pontin52 protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>AF070735-1|AAC77819.1| 456|Homo sapiens RuvB-like protein RUVBL1
protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
>AB012122-1|BAA28169.1| 456|Homo sapiens TIP49 protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 327 KVIIVEGPVAAGKTAFAASLADDLGMK 407
+ +++ GP GKTA A ++A +LG K
Sbjct: 64 RAVLLAGPPGTGKTALALAIAQELGSK 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,007,578
Number of Sequences: 237096
Number of extensions: 2191690
Number of successful extensions: 4345
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4328
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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