Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28d01
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 264 5e-71
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 164 6e-41
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 164 6e-41
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 130 1e-30
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 124 6e-29
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 122 3e-28
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 120 7e-28
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 119 2e-27
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 118 5e-27
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 118 5e-27
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 116 1e-26
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 115 3e-26
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 114 6e-26
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 112 2e-25
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 112 2e-25
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 112 2e-25
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 111 3e-25
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 110 1e-24
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 103 1e-22
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 103 1e-22
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 103 1e-22
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 101 4e-22
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 99 2e-21
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 99 2e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 95 3e-20
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 95 5e-20
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 93 2e-19
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 93 2e-19
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 92 4e-19
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 87 1e-17
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 85 3e-17
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 85 6e-17
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 85 6e-17
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 83 2e-16
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 83 2e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 80 1e-15
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 80 1e-15
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 80 1e-15
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 79 2e-15
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 75 4e-14
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 75 4e-14
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 75 6e-14
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 75 6e-14
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 75 6e-14
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 69 3e-12
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 68 7e-12
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 50 1e-06
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 40 0.002
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 40 0.002
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 38 0.005
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 38 0.008
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 36 0.033
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 36 0.033
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 36 0.033
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 36 0.033
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 31 0.54
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z47357-11|CAA87428.3| 303|Caenorhabditis elegans Hypothetical p... 30 1.3
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z30662-12|CAA83142.3| 303|Caenorhabditis elegans Hypothetical p... 30 1.3
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 30 1.3
U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical pr... 29 2.2
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 29 3.8
AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical ... 29 3.8
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 28 5.1
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 5.1
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ... 28 5.1
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 5.1
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 5.1
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 5.1
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 5.1
AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical ... 28 5.1
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 28 5.1
AC024882-6|AAF60925.2| 340|Caenorhabditis elegans Seven tm rece... 28 5.1
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 5.1
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 28 6.7
Z49886-4|CAA90053.1| 137|Caenorhabditis elegans Hypothetical pr... 28 6.7
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 28 6.7
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 28 6.7
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 28 6.7
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 28 6.7
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 28 6.7
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.9
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 27 8.9
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 264 bits (646), Expect = 5e-71
Identities = 122/195 (62%), Positives = 158/195 (81%), Gaps = 2/195 (1%)
Frame = +2
Query: 80 DKESYGDETNQDSEVEQTPTENVNEDTEDD--KITFKDLGVVDVLCEACEELKWKKPSKI 253
D + + ++ ++ TE + +D E+D + +F +LGV LC+AC+ L W KPSKI
Sbjct: 11 DNQKFLGNRKKNLTKKKVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKI 70
Query: 254 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISE 433
Q+ A+P AL GKD+IGLAETGSGKTGAFA+P+LQ+LL++PQ +F L+LTPTRELAFQI +
Sbjct: 71 QQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQ 130
Query: 434 QFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKY 613
QFEALG+ IG+ AVIVGG+DM AQA+ L+++PHII+ATPGRLVDHLENTKGFNL+ LK+
Sbjct: 131 QFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKF 190
Query: 614 LVMDEADRILNMDFE 658
L+MDEADRILNMDFE
Sbjct: 191 LIMDEADRILNMDFE 205
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 164 bits (398), Expect = 6e-41
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Frame = +2
Query: 80 DKESYGDETNQDSEVEQTPTE-NVNEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQ 256
++ES G+E ++ + TP ++ED K F LGV + + + ++ K + +Q
Sbjct: 58 EEESEGEEGDEFKSSDDTPKPIQISEDNMTTK-KFSQLGVCSWITQQLQTMQIKTATPVQ 116
Query: 257 KEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQ 436
IP L G DI+G A TG+GKT AFA+PILQ L +P +ALILTPTRELAFQI+EQ
Sbjct: 117 AACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQ 176
Query: 437 FEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLE---NTKGFNLRPL 607
F ALG I +KC+VIVGG ++ QA LS++PH+++ATPGRL D +E +T + +
Sbjct: 177 FTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKI 236
Query: 608 KYLVMDEADRIL 643
++ V+DEADR+L
Sbjct: 237 QFFVLDEADRML 248
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 164 bits (398), Expect = 6e-41
Identities = 87/192 (45%), Positives = 125/192 (65%), Gaps = 4/192 (2%)
Frame = +2
Query: 80 DKESYGDETNQDSEVEQTPTE-NVNEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQ 256
++ES G+E ++ + TP ++ED K F LGV + + + ++ K + +Q
Sbjct: 58 EEESEGEEGDEFKSSDDTPKPIQISEDNMTTK-KFSQLGVCSWITQQLQTMQIKTATPVQ 116
Query: 257 KEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQ 436
IP L G DI+G A TG+GKT AFA+PILQ L +P +ALILTPTRELAFQI+EQ
Sbjct: 117 AACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQ 176
Query: 437 FEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLE---NTKGFNLRPL 607
F ALG I +KC+VIVGG ++ QA LS++PH+++ATPGRL D +E +T + +
Sbjct: 177 FTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKI 236
Query: 608 KYLVMDEADRIL 643
++ V+DEADR+L
Sbjct: 237 QFFVLDEADRML 248
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 130 bits (313), Expect = 1e-30
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 9/169 (5%)
Frame = +2
Query: 179 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 358
+++ G D + +A +E+ + +P+ IQ++AIP+ L +D+IG+AETGSGKT AF LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 359 LLENPQRY---------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 511
+ P+ +A+I+ PTRELA QI E+ G +G+K ++GG Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQG 422
Query: 512 LMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
+ L ++IATPGRL+D LEN + L Y+++DEADR+L+M FE
Sbjct: 423 MKLRMGVEVVIATPGRLLDVLEN-RYLLLNQCTYVILDEADRMLDMGFE 470
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 124 bits (299), Expect = 6e-29
Identities = 60/145 (41%), Positives = 88/145 (60%), Gaps = 3/145 (2%)
Frame = +2
Query: 173 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 352
++F+ + + + +AC + P+ IQ+ IPVAL GKDI A TG+GKT AF LPIL
Sbjct: 148 VSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
Query: 353 QALLENPQRYFA---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 523
+ ++ P+ L+L PTRELA Q+ + F L I ++ + GG+D+ AQ L
Sbjct: 208 ERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 524 KKPHIIIATPGRLVDHLENTKGFNL 598
P +++ATPGRL+DHL N+ FNL
Sbjct: 268 SGPDVVVATPGRLIDHLHNSPSFNL 292
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 122 bits (293), Expect = 3e-28
Identities = 70/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%)
Frame = +2
Query: 95 GDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPV 274
G E EVEQ E + + + + F+D + E ++ + KP++IQ++ I
Sbjct: 51 GQEETMLDEVEQKYQEMLKKSSRTF-LRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAY 109
Query: 275 ALLGKDIIGLAETGSGKTGAFALPILQALLE---NPQRYF-ALILTPTRELAFQISEQFE 442
+L G D++G A+TGSGKT A +P+L+AL +P ALI++PTRELA Q
Sbjct: 110 SLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTIN 169
Query: 443 ALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVM 622
A+GA G C +++GG D+ + +S +II+ TPGRL+ H++ + L+ LV+
Sbjct: 170 AVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTPGRLLQHMDENAQMSCDSLQVLVL 228
Query: 623 DEADRILNMDF 655
DEADR+L+M F
Sbjct: 229 DEADRMLDMGF 239
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 120 bits (290), Expect = 7e-28
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 7/168 (4%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 355
T+ GV + ++ ++ KP+ IQ +AIP + G+D+IG+A+TGSGKT AF LP+ +
Sbjct: 305 TWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFR 364
Query: 356 ALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 520
+L+ P+ A+IL PTRELA Q ++ +G+K A GG+ + Q L
Sbjct: 365 HILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADL 424
Query: 521 SKKPHIIIATPGRLVDHLENTKG--FNLRPLKYLVMDEADRILNMDFE 658
+ I++ TPGR++D L G NLR + YLV+DEADR+ + FE
Sbjct: 425 KRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFE 472
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 119 bits (287), Expect = 2e-27
Identities = 66/170 (38%), Positives = 102/170 (60%), Gaps = 2/170 (1%)
Frame = +2
Query: 155 DTEDDK-ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTG 331
D D K + F+D + L E W+KPS IQ+ +I VAL G+DI+ A+ G+GKTG
Sbjct: 36 DVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTG 95
Query: 332 AFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 511
A+ +P+++ + + A+++ PTRELA Q S+ L I +K V GG D+
Sbjct: 96 AYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDI 155
Query: 512 LMLSKKPHIIIATPGRLVDHLENTKGF-NLRPLKYLVMDEADRILNMDFE 658
+ L+ H++IATPGR++D +E KG + K LV+DEAD++L+ DF+
Sbjct: 156 MRLNGTVHLVIATPGRILDLME--KGVAKMEHCKTLVLDEADKLLSQDFQ 203
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 118 bits (283), Expect = 5e-27
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
Frame = +2
Query: 113 DSEVEQTPTENVNEDTEDDKIT-FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 289
D E + T + +N++ + K ++ +G+ + +A E+ + +P+ IQ++ IP + GK
Sbjct: 4 DDEEDFTQLQ-INQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
Query: 290 DIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTRELAFQISEQFEALGASIGV 466
D++ ++ TGSGKT AF +P+LQ L AL+++PTRELA Q + + LG G+
Sbjct: 63 DVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGL 122
Query: 467 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILN 646
+CA +VGG + Q + + P I++ATPGRL+ H+ L ++Y+V DEADR+
Sbjct: 123 RCACLVGGDQIEEQFSTIHENPDILLATPGRLL-HVIVEMDLRLSYVQYVVFDEADRLFE 181
Query: 647 MDFE 658
M F+
Sbjct: 182 MGFQ 185
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 118 bits (283), Expect = 5e-27
Identities = 65/184 (35%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
Frame = +2
Query: 113 DSEVEQTPTENVNEDTEDDKIT-FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGK 289
D E + T + +N++ + K ++ +G+ + +A E+ + +P+ IQ++ IP + GK
Sbjct: 4 DDEEDFTQLQ-INQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
Query: 290 DIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTRELAFQISEQFEALGASIGV 466
D++ ++ TGSGKT AF +P+LQ L AL+++PTRELA Q + + LG G+
Sbjct: 63 DVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGL 122
Query: 467 KCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILN 646
+CA +VGG + Q + + P I++ATPGRL+ H+ L ++Y+V DEADR+
Sbjct: 123 RCACLVGGDQIEEQFSTIHENPDILLATPGRLL-HVIVEMDLRLSYVQYVVFDEADRLFE 181
Query: 647 MDFE 658
M F+
Sbjct: 182 MGFQ 185
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 116 bits (279), Expect = 1e-26
Identities = 64/171 (37%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Frame = +2
Query: 152 EDTEDDKI--TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 325
E +E+ I TF +G+ + L ++KPS IQ+ AIP L +D+I A++G+GK
Sbjct: 17 ESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGK 76
Query: 326 TGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA 505
T F++ +LQ+L + ALIL+PTRELA QI + ALG + V+C +GG ++
Sbjct: 77 TATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGE 136
Query: 506 QALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
L H++ TPGR+ D + + R +K LV+DEAD +LN F+
Sbjct: 137 DIRKLDYGQHVVSGTPGRVFDMIRR-RNLRTRAIKLLVLDEADEMLNKGFK 186
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 115 bits (277), Expect = 3e-26
Identities = 60/161 (37%), Positives = 93/161 (57%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 355
TF +G+ + L ++KPS IQ+ A+P L +D+I A++G+GKT F++ +LQ
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 356 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 535
+L + ALIL+PTRELA QI + ALG + V+C +GG ++ L H
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Query: 536 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
++ TPGR+ D + + R +K LV+DEAD +LN F+
Sbjct: 147 VVSGTPGRVFDMIRR-RNLRTRAIKLLVLDEADEMLNKGFK 186
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 114 bits (274), Expect = 6e-26
Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 5/148 (3%)
Frame = +2
Query: 230 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY-----FALI 394
K++KP+ IQ + P+A+ G+DII +A+TGSGKT AF LP L + + R L+
Sbjct: 148 KFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLV 207
Query: 395 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHL 574
L PTRELA Q+ E S+G+K + GG QA L + I++ATPGRL+D L
Sbjct: 208 LLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRLLDFL 267
Query: 575 ENTKGFNLRPLKYLVMDEADRILNMDFE 658
+N N++ YLV+DEADR+L+M FE
Sbjct: 268 DNGT-TNMKKCSYLVLDEADRMLDMGFE 294
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 112 bits (270), Expect = 2e-25
Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Frame = +2
Query: 113 DSEVEQTPTENVNEDTEDDKIT-----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 277
DS + EN+ + D + F + G + E + KP+ +QK +IP
Sbjct: 114 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTL 173
Query: 278 LLGKDIIGLAETGSGKTGAFALPILQALL------------ENPQRYF---ALILTPTRE 412
L +D++ A+TGSGKT AF LPI+Q +L N +R + AL+L+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
Query: 413 LAFQISEQFEALGASIGVKCAVIVGGMDMVA-QALMLSKKPHIIIATPGRLVDHLENTKG 589
LA QI ++ ++ A++ GG + Q L HI+IATPGRL+D +E +G
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIE--QG 291
Query: 590 F-NLRPLKYLVMDEADRILNMDFE 658
F L +YLV+DEADR+L+M FE
Sbjct: 292 FIGLAGCRYLVLDEADRMLDMGFE 315
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 112 bits (270), Expect = 2e-25
Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Frame = +2
Query: 113 DSEVEQTPTENVNEDTEDDKIT-----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 277
DS + EN+ + D + F + G + E + KP+ +QK +IP
Sbjct: 98 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTL 157
Query: 278 LLGKDIIGLAETGSGKTGAFALPILQALL------------ENPQRYF---ALILTPTRE 412
L +D++ A+TGSGKT AF LPI+Q +L N +R + AL+L+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
Query: 413 LAFQISEQFEALGASIGVKCAVIVGGMDMVA-QALMLSKKPHIIIATPGRLVDHLENTKG 589
LA QI ++ ++ A++ GG + Q L HI+IATPGRL+D +E +G
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIE--QG 275
Query: 590 F-NLRPLKYLVMDEADRILNMDFE 658
F L +YLV+DEADR+L+M FE
Sbjct: 276 FIGLAGCRYLVLDEADRMLDMGFE 299
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 112 bits (270), Expect = 2e-25
Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Frame = +2
Query: 113 DSEVEQTPTENVNEDTEDDKIT-----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 277
DS + EN+ + D + F + G + E + KP+ +QK +IP
Sbjct: 95 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTL 154
Query: 278 LLGKDIIGLAETGSGKTGAFALPILQALL------------ENPQRYF---ALILTPTRE 412
L +D++ A+TGSGKT AF LPI+Q +L N +R + AL+L+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
Query: 413 LAFQISEQFEALGASIGVKCAVIVGGMDMVA-QALMLSKKPHIIIATPGRLVDHLENTKG 589
LA QI ++ ++ A++ GG + Q L HI+IATPGRL+D +E +G
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIE--QG 272
Query: 590 F-NLRPLKYLVMDEADRILNMDFE 658
F L +YLV+DEADR+L+M FE
Sbjct: 273 FIGLAGCRYLVLDEADRMLDMGFE 296
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 111 bits (268), Expect = 3e-25
Identities = 78/220 (35%), Positives = 122/220 (55%), Gaps = 14/220 (6%)
Frame = +2
Query: 41 IPQNNDNLEKMTADKESYGD--ETNQDSEVEQTPTENVNEDTEDD------KITFKDL-G 193
+ Q D EK A + + E + EVE+ E +E K TF L G
Sbjct: 14 LKQMKDGHEKKKAKEVVVEEPMEEEDEEEVEEEQKHQTEESSETKVSEFLTKTTFASLEG 73
Query: 194 VVDV-LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE- 367
V+ L +A + L + ++IQ ++I L GKD++ A+TGSGKT AF LP ++ L +
Sbjct: 74 KVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKL 133
Query: 368 NPQRYFA---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHI 538
N +++ +I++PTREL+ Q L + +++GG + A+ L+K I
Sbjct: 134 NWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSI 193
Query: 539 IIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
++ATPGRL+DHL+NT F +R +K L++DEADRIL++ FE
Sbjct: 194 LVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFE 233
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 110 bits (264), Expect = 1e-24
Identities = 68/153 (44%), Positives = 93/153 (60%), Gaps = 14/153 (9%)
Frame = +2
Query: 242 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY--------FALIL 397
P+ IQ + IPVAL G+D+IG+A TGSGKT F LP++ LE + F LI+
Sbjct: 213 PTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272
Query: 398 TPTRELAFQ----ISEQFEALGAS--IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR 559
P+RELA Q I E F+ALG + ++ + +GG+ + QA + HI++ATPGR
Sbjct: 273 VPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGR 332
Query: 560 LVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
L D L K NL +YLV+DEADR+L+M FE
Sbjct: 333 LSDML-TKKIINLEVCRYLVLDEADRMLDMGFE 364
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 103 bits (247), Expect = 1e-22
Identities = 64/195 (32%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Frame = +2
Query: 125 EQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGL 304
E+ P E +D F DL + + + E + + +P+ +QK +IP G+D++
Sbjct: 150 EEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSC 209
Query: 305 AETGSGKTGAFALPILQALLEN----------------PQRYFALILTPTRELAFQISEQ 436
A+TGSGKT AF +P++ A+L++ Q AL+L+PTREL+ QI +
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNE 269
Query: 437 FEALGASIGVKCAVIVGGMDMVAQAL-MLSKKPHIIIATPGRLVDHLENTKGFNLRPLKY 613
+ A++ GG + + L HI+IATPGRL+D ++ + +Y
Sbjct: 270 SRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGL-IGMEGCRY 328
Query: 614 LVMDEADRILNMDFE 658
LV+DEADR+L+M FE
Sbjct: 329 LVLDEADRMLDMGFE 343
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 103 bits (246), Expect = 1e-22
Identities = 56/161 (34%), Positives = 86/161 (53%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 355
+F D+ + + L ++KPS IQK AI GKD+I A++G+GKT F++ ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 356 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 535
+ AL++ PTRELA QI + ALG + V +GG + L H
Sbjct: 90 RIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIH 149
Query: 536 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
+++ TPGR+ D + N + +K V+DEAD +L+ F+
Sbjct: 150 VVVGTPGRVGDMI-NRNALDTSRIKMFVLDEADEMLSRGFK 189
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 103 bits (246), Expect = 1e-22
Identities = 56/161 (34%), Positives = 86/161 (53%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 355
+F D+ + + L ++KPS IQK AI GKD+I A++G+GKT F++ ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 356 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 535
+ AL++ PTRELA QI + ALG + V +GG + L H
Sbjct: 90 RIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIH 149
Query: 536 IIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
+++ TPGR+ D + N + +K V+DEAD +L+ F+
Sbjct: 150 VVVGTPGRVGDMI-NRNALDTSRIKMFVLDEADEMLSRGFK 189
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 101 bits (242), Expect = 4e-22
Identities = 57/174 (32%), Positives = 101/174 (58%), Gaps = 6/174 (3%)
Frame = +2
Query: 155 DTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGA 334
D E + TF D G+ + + ++ EL W+K +++Q+ I +AL K+I+G A TGSGKTGA
Sbjct: 83 DFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGA 142
Query: 335 FALPILQALLENPQRY------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 496
F +P++Q L+ + A+I+ PT+EL QI + F L ++ A+ + ++
Sbjct: 143 FLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDIN 202
Query: 497 MVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
++ L + H+++ TPG+L+ + + + + YLVMDEAD +L+ +E
Sbjct: 203 EEENSVWLEDRSHVVVTTPGKLL-RMCSLRPEYCTLVSYLVMDEADLLLSFGYE 255
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 99.1 bits (236), Expect = 2e-21
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Frame = +2
Query: 179 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 358
F+D + + A + ++ PS++Q E IP A+LG D++ A++G GKT F + LQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 359 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK-P 532
L + + TRELAFQIS+++E + GVK AV GGM + L+ P
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 533 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 643
HI++ TPGR++ L + L +KY V+DE D+++
Sbjct: 163 HIVVGTPGRML-ALARSGKLKLDKVKYFVLDECDKMI 198
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 99.1 bits (236), Expect = 2e-21
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Frame = +2
Query: 179 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 358
F+D + + A + ++ PS++Q E IP A+LG D++ A++G GKT F + LQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 359 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK-P 532
L + + TRELAFQIS+++E + GVK AV GGM + L+ P
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 533 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 643
HI++ TPGR++ L + L +KY V+DE D+++
Sbjct: 163 HIVVGTPGRML-ALARSGKLKLDKVKYFVLDECDKMI 198
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 99.1 bits (236), Expect = 2e-21
Identities = 56/157 (35%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Frame = +2
Query: 179 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 358
F+D + + A + ++ PS++Q E IP A+LG D++ A++G GKT F + LQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 359 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK-P 532
L + + TRELAFQIS+++E + GVK AV GGM + L+ P
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 533 HIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRIL 643
HI++ TPGR++ L + L +KY V+DE D+++
Sbjct: 162 HIVVGTPGRML-ALARSGKLKLDKVKYFVLDECDKMI 197
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 95.5 bits (227), Expect = 3e-20
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 11/153 (7%)
Frame = +2
Query: 233 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---------- 382
++KPS IQ + P+ L G+D IG+++TGSGKT AF LP L + +Y
Sbjct: 104 FEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPS 163
Query: 383 -FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR 559
F L+L+PTRELA QI + + + G K + GG Q I+IATPGR
Sbjct: 164 PFVLVLSPTRELAQQIEGEVKKYSYN-GYKSVCLYGGGSRPEQVEACRGGVEIVIATPGR 222
Query: 560 LVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
L D L N +L + Y+V+DEADR+L+M FE
Sbjct: 223 LTD-LSNDGVISLASVTYVVLDEADRMLDMGFE 254
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 94.7 bits (225), Expect = 5e-20
Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
Frame = +2
Query: 203 VLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENP--- 373
+L EA + ++++P+ IQ AIP AL G+D++G+A+TGSGKT A+ P + +++ P
Sbjct: 275 LLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLK 334
Query: 374 --QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK-PHIII 544
+ A+I+ PTRELA Q+ ++ + + GG Q+ L + +++
Sbjct: 335 AGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVV 394
Query: 545 ATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
TPGR++D L N +LV DEADR+ +M FE
Sbjct: 395 CTPGRIID-LVKMGATNFLRTTFLVFDEADRMFDMGFE 431
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 92.7 bits (220), Expect = 2e-19
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Frame = +2
Query: 116 SEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 295
SEV + + D + + TF+ L + E + ++ +PS +Q AIPV LLG+D+
Sbjct: 4 SEVIEVLDRGSSIDVQSN-CTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDM 62
Query: 296 IGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCA 475
+ A++G+GKT F++ ++ L +I+TPTRE++ QI E + A G + +
Sbjct: 63 LVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKV-APTGARTS 121
Query: 476 VIVGGMDMVAQALMLSK-KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD 652
V VGG + L + +P I+I TPGR+ L N+ + + V+DEAD++++
Sbjct: 122 VYVGGSAHKLNLIDLKQTRPQIVIGTPGRIA-QLVKLGAMNMSHVDFFVLDEADKLMDEV 180
Query: 653 F 655
F
Sbjct: 181 F 181
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 92.7 bits (220), Expect = 2e-19
Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Frame = +2
Query: 116 SEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 295
SEV + + D + + TF+ L + E + ++ +PS +Q AIPV LLG+D+
Sbjct: 4 SEVIEVLDRGSSIDVQSN-CTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDM 62
Query: 296 IGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCA 475
+ A++G+GKT F++ ++ L +I+TPTRE++ QI E + A G + +
Sbjct: 63 LVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKV-APTGARTS 121
Query: 476 VIVGGMDMVAQALMLSK-KPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNMD 652
V VGG + L + +P I+I TPGR+ L N+ + + V+DEAD++++
Sbjct: 122 VYVGGSAHKLNLIDLKQTRPQIVIGTPGRIA-QLVKLGAMNMSHVDFFVLDEADKLMDEV 180
Query: 653 F 655
F
Sbjct: 181 F 181
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 91.9 bits (218), Expect = 4e-19
Identities = 61/161 (37%), Positives = 95/161 (59%), Gaps = 17/161 (10%)
Frame = +2
Query: 212 EACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPILQALLENP----- 373
EA E++ + +P++IQ +P A+ + D++G AETGSGKT AF +P++ LLE+
Sbjct: 168 EAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQE 227
Query: 374 ------QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS-KKP 532
+ ALI+ PTREL QI + AL ++ + IVGG+ V Q ++S ++P
Sbjct: 228 TESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRP 287
Query: 533 HIIIATPGRLVDHLE--NTKGF--NLRPLKYLVMDEADRIL 643
I++ATPGRL ++ T F + LK LV+DE DR++
Sbjct: 288 DIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMV 328
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 86.6 bits (205), Expect = 1e-17
Identities = 58/155 (37%), Positives = 91/155 (58%), Gaps = 17/155 (10%)
Frame = +2
Query: 230 KWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPILQALLENP----------- 373
++ +P++IQ +P A+ + D++G AETGSGKT AF +P++ LLE+
Sbjct: 7 RFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEV 66
Query: 374 QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS-KKPHIIIAT 550
+ ALI+ PTREL QI + AL ++ + IVGG+ V Q ++S ++P I++AT
Sbjct: 67 RGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVAT 126
Query: 551 PGRLVDHLE--NTKGF--NLRPLKYLVMDEADRIL 643
PGRL ++ T F + LK LV+DE DR++
Sbjct: 127 PGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMV 161
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 85.4 bits (202), Expect = 3e-17
Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Frame = +2
Query: 41 IPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEAC 220
+ ++ D L + TAD+ + D QD VE N +D ++ + G+ + E
Sbjct: 343 VTRDIDELVRETADRLADCD-VGQDRAVE---IRNAEKDVR--LTSWTNSGLHPTILETL 396
Query: 221 EELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALL------ENPQRY 382
+ +K+ IQ IP L G D++G AET +GKT AF LPI+ +L N R
Sbjct: 397 KRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQ 456
Query: 383 ----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIAT 550
ALIL PTRELA QI E + + + G D + I+I T
Sbjct: 457 DDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGT 516
Query: 551 PGRLVDHLENTKGFNLRPLKYLVMDEADRIL 643
GR++D + +L L++LV DEADR+L
Sbjct: 517 CGRIMDFTVKSH-ISLLHLRFLVFDEADRLL 546
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 84.6 bits (200), Expect = 6e-17
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 355
+F D + + E + + + IQ+ +P+ GKDI+ A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 356 AL-LENPQRYFA--------LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 508
L LE Y A +ILTPTRELA QI + ++ + GG+++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 509 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILN 646
+ K II+ T GR V H L +YLV+DEADR+++
Sbjct: 419 KSQIMKGCTIIVGTIGR-VKHFCEDGAIKLDKCRYLVLDEADRMID 463
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 84.6 bits (200), Expect = 6e-17
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 9/166 (5%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 355
+F D + + E + + + IQ+ +P+ GKDI+ A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 356 AL-LENPQRYFA--------LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 508
L LE Y A +ILTPTRELA QI + ++ + GG+++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 509 ALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILN 646
+ K II+ T GR V H L +YLV+DEADR+++
Sbjct: 419 KSQIMKGCTIIVGTIGR-VKHFCEDGAIKLDKCRYLVLDEADRMID 463
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 82.6 bits (195), Expect = 2e-16
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Frame = +2
Query: 74 TADKESYGDETNQDSEVE--QTPTENVNEDTEDDKITFKDLGVVDV-LCEACEELKWKKP 244
T D + + D N D +++ Q + + D +F ++ L + + +K +P
Sbjct: 700 TPDDKMFEDAVNNDDKIDFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRP 759
Query: 245 SKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR----------YFALI 394
+ IQ+ + + G D++ A TGSGKT AF +P + L+E ++ LI
Sbjct: 760 TPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLI 819
Query: 395 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA--QALMLSKKPHIIIATPGRLVD 568
+ PTREL Q L G+KC + GG A Q L + +I++AT GRL D
Sbjct: 820 VAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQD 879
Query: 569 HLENTKGFNLRPLKYLVMDEADRILN 646
+ N +L +KY+V+DEADR+++
Sbjct: 880 FV-NAGEVSLSKMKYIVLDEADRMVD 904
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 82.6 bits (195), Expect = 2e-16
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Frame = +2
Query: 74 TADKESYGDETNQDSEVE--QTPTENVNEDTEDDKITFKDLGVVDV-LCEACEELKWKKP 244
T D + + D N D +++ Q + + D +F ++ L + + +K +P
Sbjct: 700 TPDDKMFEDAVNNDDKIDFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRP 759
Query: 245 SKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR----------YFALI 394
+ IQ+ + + G D++ A TGSGKT AF +P + L+E ++ LI
Sbjct: 760 TPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLI 819
Query: 395 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA--QALMLSKKPHIIIATPGRLVD 568
+ PTREL Q L G+KC + GG A Q L + +I++AT GRL D
Sbjct: 820 VAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRLQD 879
Query: 569 HLENTKGFNLRPLKYLVMDEADRILN 646
+ N +L +KY+V+DEADR+++
Sbjct: 880 FV-NAGEVSLSKMKYIVLDEADRMVD 904
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 80.2 bits (189), Expect = 1e-15
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Frame = +2
Query: 56 DNLEKM-TADKESYGDETNQ--DSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEE 226
DN+E + K S G N+ D+EV+ T +E + K TF + + + + +
Sbjct: 301 DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKT-VGIKPCK-TFAEANLTETMQKNVAH 358
Query: 227 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA------ 388
+ K + IQ+ A+P+ G DI+ A+TGSGKT AF LPI+ L+++ A
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Query: 389 ---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR 559
+ILTPTRELA QI + ++ + GG+ + + K II+ T GR
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGR 478
Query: 560 LVDHLENTKGFNLRPLKYLVMDEADRILN 646
+ H L ++ V+DEADR+++
Sbjct: 479 -IKHFCEEGTIKLDKCRFFVLDEADRMID 506
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 80.2 bits (189), Expect = 1e-15
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Frame = +2
Query: 56 DNLEKM-TADKESYGDETNQ--DSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEE 226
DN+E + K S G N+ D+EV+ T +E + K TF + + + + +
Sbjct: 301 DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKT-VGIKPCK-TFAEANLTETMQKNVAH 358
Query: 227 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA------ 388
+ K + IQ+ A+P+ G DI+ A+TGSGKT AF LPI+ L+++ A
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Query: 389 ---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR 559
+ILTPTRELA QI + ++ + GG+ + + K II+ T GR
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGR 478
Query: 560 LVDHLENTKGFNLRPLKYLVMDEADRILN 646
+ H L ++ V+DEADR+++
Sbjct: 479 -IKHFCEEGTIKLDKCRFFVLDEADRMID 506
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 80.2 bits (189), Expect = 1e-15
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Frame = +2
Query: 56 DNLEKM-TADKESYGDETNQ--DSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEE 226
DN+E + K S G N+ D+EV+ T +E + K TF + + + + +
Sbjct: 301 DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKT-VGIKPCK-TFAEANLTETMQKNVAH 358
Query: 227 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA------ 388
+ K + IQ+ A+P+ G DI+ A+TGSGKT AF LPI+ L+++ A
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Query: 389 ---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR 559
+ILTPTRELA QI + ++ + GG+ + + K II+ T GR
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGR 478
Query: 560 LVDHLENTKGFNLRPLKYLVMDEADRILN 646
+ H L ++ V+DEADR+++
Sbjct: 479 -IKHFCEEGTIKLDKCRFFVLDEADRMID 506
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 79.4 bits (187), Expect = 2e-15
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Frame = +2
Query: 242 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTRELA 418
PS + P L +D+ A TGSGKT + LP+L A+ P + A+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 419 FQISEQFEALGASIGV-KCAVIVGGMDMVAQALML-SKKPHIIIATPGRLVDHLEN--TK 586
QI ++F+ GV K + G D +A L S P++I+ATP RLV HL +
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARLVQHLTSKIPP 261
Query: 587 GFNLRPLKYLVMDEADRI 640
+L L++L++DEADR+
Sbjct: 262 PIDLSKLRFLIVDEADRM 279
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 77.8 bits (183), Expect = 6e-15
Identities = 53/169 (31%), Positives = 85/169 (50%), Gaps = 10/169 (5%)
Frame = +2
Query: 173 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 352
+ F D + L E ++PS IQ ++IP ++++ A TGSGKT AFALP++
Sbjct: 126 LRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVI 185
Query: 353 QALLE----------NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMV 502
+LE N + A++L PTRELA Q +F A+ + A G +
Sbjct: 186 DEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISAANFSGEETDI 245
Query: 503 AQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEADRILNM 649
A I+++TP R+V HL+ + L++LV+DE+DR+ +
Sbjct: 246 QHA-------DILVSTPNRIVFHLDK---IDTSSLRWLVVDESDRLFEV 284
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 74.9 bits (176), Expect = 4e-14
Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG--KDIIGLAETGSGKTGAFALPI 349
+F++L + + +A + + ++ P++IQ+ A+P+ L+ ++I A++G+GKT AF L +
Sbjct: 210 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 269
Query: 350 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 526
L + N + L PT ELA QI E E +G I +K + G +M A M +
Sbjct: 270 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA---MRGR 326
Query: 527 K--PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEAD 634
K I+I TPG D+L+ K + ++ LV+DEAD
Sbjct: 327 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEAD 364
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 74.9 bits (176), Expect = 4e-14
Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG--KDIIGLAETGSGKTGAFALPI 349
+F++L + + +A + + ++ P++IQ+ A+P+ L+ ++I A++G+GKT AF L +
Sbjct: 235 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 294
Query: 350 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 526
L + N + L PT ELA QI E E +G I +K + G +M A M +
Sbjct: 295 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA---MRGR 351
Query: 527 K--PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEAD 634
K I+I TPG D+L+ K + ++ LV+DEAD
Sbjct: 352 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEAD 389
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 74.9 bits (176), Expect = 4e-14
Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Frame = +2
Query: 176 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG--KDIIGLAETGSGKTGAFALPI 349
+F++L + + +A + + ++ P++IQ+ A+P+ L+ ++I A++G+GKT AF L +
Sbjct: 619 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 678
Query: 350 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 526
L + N + L PT ELA QI E E +G I +K + G +M A M +
Sbjct: 679 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA---MRGR 735
Query: 527 K--PHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEAD 634
K I+I TPG D+L+ K + ++ LV+DEAD
Sbjct: 736 KLTEQIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEAD 773
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 74.5 bits (175), Expect = 6e-14
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Frame = +2
Query: 56 DNLEKM-TADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELK 232
DN+E++ K S G N+ + E T + TF + + + + +
Sbjct: 512 DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAG 571
Query: 233 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA-------- 388
+ K + IQ+ +P+ G DI+ A+TGSGKT AF LPI+ L++ A
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPR 631
Query: 389 -LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 565
+ILTPTREL QI + ++ + GG+ + + K II+ T GR +
Sbjct: 632 CIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGR-I 690
Query: 566 DHLENTKGFNLRPLKYLVMDEADRILN 646
H L ++ V+DEADR+++
Sbjct: 691 KHFCEEGTIKLDKCRFFVLDEADRMID 717
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 74.5 bits (175), Expect = 6e-14
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Frame = +2
Query: 56 DNLEKM-TADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELK 232
DN+E++ K S G N+ + E T + TF + + + + +
Sbjct: 512 DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAG 571
Query: 233 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA-------- 388
+ K + IQ+ +P+ G DI+ A+TGSGKT AF LPI+ L++ A
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPR 631
Query: 389 -LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 565
+ILTPTREL QI + ++ + GG+ + + K II+ T GR +
Sbjct: 632 CIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGR-I 690
Query: 566 DHLENTKGFNLRPLKYLVMDEADRILN 646
H L ++ V+DEADR+++
Sbjct: 691 KHFCEEGTIKLDKCRFFVLDEADRMID 717
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 74.5 bits (175), Expect = 6e-14
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 10/207 (4%)
Frame = +2
Query: 56 DNLEKM-TADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELK 232
DN+E++ K S G N+ + E T + TF + + + + +
Sbjct: 512 DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAG 571
Query: 233 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA-------- 388
+ K + IQ+ +P+ G DI+ A+TGSGKT AF LPI+ L++ A
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPR 631
Query: 389 -LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 565
+ILTPTREL QI + ++ + GG+ + + K II+ T GR +
Sbjct: 632 CIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGR-I 690
Query: 566 DHLENTKGFNLRPLKYLVMDEADRILN 646
H L ++ V+DEADR+++
Sbjct: 691 KHFCEEGTIKLDKCRFFVLDEADRMID 717
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 73.7 bits (173), Expect = 1e-13
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Frame = +2
Query: 290 DIIGLAETGSGKTGAFALPILQALLE---NPQRYFALILTPTRELAFQISEQFEALGASI 460
D++ + TGSGKT AF LP+++ + P ALIL+P+REL QI + +
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 461 GVKCAVIVGGMDMVAQALML-SKKPHIIIATPGRLVDHLENTKGF---NLRPLKYLVMDE 628
+ + GG + M +K +I++ATPGRL +++ K +R L+ LV+DE
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDE 167
Query: 629 ADRILNMDFE 658
ADR + FE
Sbjct: 168 ADRFNEIQFE 177
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 68.9 bits (161), Expect = 3e-12
Identities = 46/142 (32%), Positives = 72/142 (50%)
Frame = +2
Query: 233 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRE 412
++KPS IQK A+ GKD+ ++ GSGKT + ILQ + ++L P R
Sbjct: 16 FEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRG 75
Query: 413 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGF 592
+A + EQ ++LG ++ V + G D A+ K H+++ TP D L N
Sbjct: 76 MAQRAHEQLKSLGRNLNVNATCL--GFDTTAEN---DKISHVLMGTP---KDFLSNIPSD 127
Query: 593 NLRPLKYLVMDEADRILNMDFE 658
R +K V+DEAD +L+ F+
Sbjct: 128 TSR-IKMFVLDEADEMLSKGFK 148
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 67.7 bits (158), Expect = 7e-12
Identities = 31/63 (49%), Positives = 41/63 (65%)
Frame = +2
Query: 179 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 358
F++ G++ L +A L W P+ +Q EAIP L G D + AETGSGKTGAF+LPI Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 359 LLE 367
+ E
Sbjct: 64 VWE 66
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Frame = +2
Query: 389 LILTPTRELA---FQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR 559
+IL PTREL FQ + F ++ S ++C + G +M L I++ TP R
Sbjct: 285 VILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSR 344
Query: 560 LVDHLENTKGFNLRPLKYLVMDEADRIL 643
+ D L +T + L+++V+DE D+ L
Sbjct: 345 VFD-LIHTGKLATKNLQFVVIDEIDQFL 371
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/91 (29%), Positives = 52/91 (57%)
Frame = +2
Query: 386 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLV 565
A+I+ PT+EL QI + F L ++ A+ + ++ ++ L + H+++ TPG+L+
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKLL 158
Query: 566 DHLENTKGFNLRPLKYLVMDEADRILNMDFE 658
+ + + + YLVMDEAD +L+ +E
Sbjct: 159 -RMCSLRPEYCTLVSYLVMDEADLLLSFGYE 188
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 40.3 bits (90), Expect = 0.001
Identities = 40/148 (27%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Frame = +2
Query: 248 KIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF---------ALILT 400
++Q+ +I V G+ ++ A TG GKT AF +P ++A LEN Q LI+
Sbjct: 18 RVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMA 77
Query: 401 PTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH------IIIATPGRL 562
T L Q+ + E + +G++C V + + +++ P I T G+L
Sbjct: 78 STSALVDQLFNRCELI---LGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKL 134
Query: 563 VDHLENTKGFNLRPLKYLVMDEADRILN 646
+E L LK +++DEAD++++
Sbjct: 135 KATIE-CGDVCLDNLKTIILDEADKMID 161
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Frame = +2
Query: 254 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN----PQRYFALILTPTRELAF 421
Q+E VAL GK+ I A TGSGKT A I++ E+ +R+ AL +TP +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFESRSSEGKRFKALFMTPNSMI-- 353
Query: 422 QISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVD 568
+++Q ++ + + V I+ G D V ++ K +I+ATP +V+
Sbjct: 354 -LNQQAASISSYLDHVYHTQIIQGSDNVPTRNVIQSK-DLIVATPQMIVN 401
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Frame = +2
Query: 254 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN----PQRYFALILTPTRELAF 421
Q+E VAL GK+ I A TGSGKT A I++ E+ +R+ AL +TP +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFESRSSEGKRFKALFMTPNSMI-- 353
Query: 422 QISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKPHIIIATPGRLVD 568
+++Q ++ + + V I+ G D V ++ K +I+ATP +V+
Sbjct: 354 -LNQQAASISSYLDHVYHTQIIQGSDNVPTRNVIQSK-DLIVATPQMIVN 401
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 38.3 bits (85), Expect = 0.005
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Frame = +2
Query: 251 IQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQ----RYFA-----LILTP 403
+Q+ +I V G+ ++ A TG GKT AF +P ++A L+N Q Y LI+
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKNRQSNCFEYTKPSPSILIMAS 178
Query: 404 TRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH------IIIATPGRLV 565
T L Q+ + E + +G++C V + + +++ P I T G+L
Sbjct: 179 TSALVDQLFNRCELI---LGLQCMDNVEPIRDIKIDKLVANHPFTKGQCDIAFCTIGKLK 235
Query: 566 DHLENTKGFNLRPLKYLVMDEADRILN 646
+E L LK +++DEAD++++
Sbjct: 236 ATIE-CGDVCLDNLKTIILDEADKMID 261
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 37.5 bits (83), Expect = 0.008
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Frame = +2
Query: 251 IQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ-ALLENP--------QRYFALILTP 403
+Q+++I + ++ A TG GKT AF +P ++ AL E P LIL
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILAN 177
Query: 404 TRELAFQISEQFEALGASIGVKCAVIVGGM---DMVAQALMLSKKPHIIIATPGRLVDHL 574
T L Q+ + E L I ++ + + + +VA + I T G+L +
Sbjct: 178 TNSLVEQLFNRCEVLLGLIDMEDIIPIRDIKIEKLVASYQFTKDQCDIAFCTMGKLKASI 237
Query: 575 ENTKGFNLRPLKYLVMDEADRILNM 649
E+ K L LK +++DE+D+++++
Sbjct: 238 ED-KTILLDNLKMMILDESDKMIDI 261
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 44 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACE 223
P++N++ E T + S +ET+ EVE ENVN+ E+D + +D G D E E
Sbjct: 390 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 442
Query: 224 ELKWKK 241
KWK+
Sbjct: 443 SKKWKR 448
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 44 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACE 223
P++N++ E T + S +ET+ EVE ENVN+ E+D + +D G D E E
Sbjct: 363 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 415
Query: 224 ELKWKK 241
KWK+
Sbjct: 416 SKKWKR 421
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 44 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACE 223
P++N++ E T + S +ET+ EVE ENVN+ E+D + +D G D E E
Sbjct: 363 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 415
Query: 224 ELKWKK 241
KWK+
Sbjct: 416 SKKWKR 421
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 44 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACE 223
P++N++ E T + S +ET+ EVE ENVN+ E+D + +D G D E E
Sbjct: 363 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 415
Query: 224 ELKWKK 241
KWK+
Sbjct: 416 SKKWKR 421
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 32.7 bits (71), Expect = 0.24
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Frame = +2
Query: 308 ETGSGKTGAFALPILQALLENPQ--RYFALILTPTRELAFQISEQF-EALGASIGVKCAV 478
ETG GK+ A +L++ LEN + A++ P R A ++E+ G +G C
Sbjct: 405 ETGCGKSTQVAQFLLESFLENSNGASFNAVVSQPRRISAISLAERVANERGEEVGETC-- 462
Query: 479 IVGGMDMVAQALMLSKKPHIIIATPGRLVDHLENTKGFNLRPLKYLVMDEA-DRILNMDF 655
G ++ + I+ T G L+ +EN LR + ++++DE +R ++ DF
Sbjct: 463 ---GYNVRFDSATPRPYGSIMFCTVGVLLRMMEN----GLRGISHVIIDEIHERDVDTDF 515
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.5 bits (68), Expect = 0.54
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Frame = +2
Query: 233 WKKPSKIQKEAIPVALLGKDIIGL-AETGSGKTGAFALPILQA----LLENP----QRYF 385
+K ++IQ AL K+ + L A TG+GKT L +LQ L E+ +
Sbjct: 472 YKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFK 531
Query: 386 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR-- 559
+ + P + L ++ F A G+ + G M + M ++ +I+ TP +
Sbjct: 532 IVYIAPMKSLVQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQ---VIVCTPEKYD 588
Query: 560 LVDHLENTKGFNLRPLKYLVMDE 628
+V + +N + ++ L++DE
Sbjct: 589 VVTRKGGERAYN-QMVRLLIIDE 610
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 50 NNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACE-E 226
N DN+ ++ ++ +ET ++ E Q E E TE+ KI K + + C + E E
Sbjct: 2182 NLDNMVALSKERRKENNETQEEEEQIQKRVEEFKESTEEQKIQ-KSIELTKEECTSDEKE 2240
Query: 227 LK 232
LK
Sbjct: 2241 LK 2242
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 50 NNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACE-E 226
N DN+ ++ ++ +ET ++ E Q E E TE+ KI K + + C + E E
Sbjct: 2182 NLDNMVALSKERRKENNETQEEEEQIQKRVEEFKESTEEQKIQ-KSIELTKEECTSDEKE 2240
Query: 227 LK 232
LK
Sbjct: 2241 LK 2242
>Z47357-11|CAA87428.3| 303|Caenorhabditis elegans Hypothetical
protein T16H12.9 protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +2
Query: 38 CIPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEA 217
CI + L + D + D D + P ++N+D + K + D+G V C+
Sbjct: 29 CIQPDPSMLNCLGYDSKLQADTI--DEAIASFPDLSLNDDVANQKFSTADVGCVTKECQD 86
Query: 218 CEELKWKKPSKIQKEAIPVALLGKDI 295
C + ++K+ V LL KDI
Sbjct: 87 CRK-------DMRKQLQKVGLLAKDI 105
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical protein
C08B11.3 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +2
Query: 29 RLFCIPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVN--EDTEDDKITFKDLGVVD 202
R+ + ND +++ + E +ETN++ E TE V+ +++E K D
Sbjct: 885 RMNVVSNGNDIEKEIEKETEKVEEETNEEKNKEVVETEVVDDAQESEKRKCVPPSSNPTD 944
Query: 203 VLCE-ACEELKWKKPSKIQK 259
+C+ C + + PS + K
Sbjct: 945 YMCDWDCCSIYYASPSHVLK 964
>Z30662-12|CAA83142.3| 303|Caenorhabditis elegans Hypothetical
protein T16H12.9 protein.
Length = 303
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +2
Query: 38 CIPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEA 217
CI + L + D + D D + P ++N+D + K + D+G V C+
Sbjct: 29 CIQPDPSMLNCLGYDSKLQADTI--DEAIASFPDLSLNDDVANQKFSTADVGCVTKECQD 86
Query: 218 CEELKWKKPSKIQKEAIPVALLGKDI 295
C + ++K+ V LL KDI
Sbjct: 87 CRK-------DMRKQLQKVGLLAKDI 105
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 30.3 bits (65), Expect = 1.3
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Frame = +2
Query: 233 WKKPSKIQKEAIPVALLGKDIIGL-AETGSGKTGAFALPILQA----LLENP----QRYF 385
+K ++IQ AL K+ + L A TG+GKT L +LQ L E+ + +
Sbjct: 274 YKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEEFK 333
Query: 386 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGR-- 559
+ + PT+ L ++ F A G+ + G M+ + M ++ +I+ TP +
Sbjct: 334 IVYIAPTKSLVQEMVGSFSKRLAPFGITVGEMTGQMN--KEQFMATQ---VIVCTPEKYD 388
Query: 560 LVDHLENTKGFNLRPLKYLVMDE 628
+V + +N + ++ L++DE
Sbjct: 389 VVTRKGGERAYN-QMVRLLIIDE 410
>U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical
protein R11B5.1 protein.
Length = 614
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = -2
Query: 477 TAHFTPMLAPSASNCSDI*NASSLVGVSISAKYLCGFSSS 358
TA+ TP LAPSA+ C D L +S++ + C SSS
Sbjct: 95 TANGTPALAPSAAKCLD----EPLCSLSLNTRADCSSSSS 130
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +2
Query: 44 PQNNDNLEKMTADKESYGDETN--QDSEVEQTPTENVN-EDTEDDKI 175
P ++++EK +KE GDE + D E EQ E+++ ED +++K+
Sbjct: 209 PDRDESIEKQP-EKEDDGDELDYGDDEEKEQKDDESMDAEDAKEEKV 254
>AF039040-4|AAB94182.1| 368|Caenorhabditis elegans Hypothetical
protein T22B11.2 protein.
Length = 368
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/38 (26%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +3
Query: 348 YFKHYWRTRRDILHLYSH--QQGNWHFRYQNNLKHLVQ 455
Y+K +W+TR +L++Y + + +W+F+ ++ +V+
Sbjct: 154 YYKLFWKTRLALLYIYKYVSKDFDWYFKGDDDTYLIVE 191
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 254 QKEAIPVALLGKDIIGLAETGSGKT 328
Q+E + AL GK+ + +A TGSGKT
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKT 399
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 378 DILHLYSHQQGNWHFRYQNN 437
DILHL H G + FR NN
Sbjct: 2736 DILHLLKHDAGEYTFRVSNN 2755
>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
protein Y113G7C.1 protein.
Length = 1494
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/68 (25%), Positives = 30/68 (44%)
Frame = +2
Query: 59 NLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELKWK 238
N+E+ D+E + E + E +D ED K +D +D L +E + K
Sbjct: 1050 NVERAKKDEERAKKDKRDAEERRKKDEERAKKDKEDAKKAKEDQEKIDKLAAEVKEREEK 1109
Query: 239 KPSKIQKE 262
++ +KE
Sbjct: 1110 SLARHEKE 1117
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 378 DILHLYSHQQGNWHFRYQNN 437
DILHL H G + FR NN
Sbjct: 2653 DILHLLKHDAGEYTFRVSNN 2672
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 378 DILHLYSHQQGNWHFRYQNN 437
DILHL H G + FR NN
Sbjct: 2974 DILHLLKHDAGEYTFRVSNN 2993
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 378 DILHLYSHQQGNWHFRYQNN 437
DILHL H G + FR NN
Sbjct: 2974 DILHLLKHDAGEYTFRVSNN 2993
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 378 DILHLYSHQQGNWHFRYQNN 437
DILHL H G + FR NN
Sbjct: 2974 DILHLLKHDAGEYTFRVSNN 2993
>AF067947-7|AAK68397.2| 295|Caenorhabditis elegans Hypothetical
protein T10B5.3 protein.
Length = 295
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 80 DKESYGDETNQDSEVEQTPTENVNEDTEDD 169
D ES D+ +D+E+++ EN ++D EDD
Sbjct: 237 DGESSEDDWWEDNELKEDEEENQDDDDEDD 266
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 47 QNND-NLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACE 223
+N D N+EK T + + + + +TP V E +D+K +V EA +
Sbjct: 45 ENGDTNIEKKTEEPVVEAKVSEEPATTSETPAAQVTESQKDEKTDDAPAEPAEVAVEAAK 104
Query: 224 E 226
E
Sbjct: 105 E 105
>AC024882-6|AAF60925.2| 340|Caenorhabditis elegans Seven tm
receptor protein 153 protein.
Length = 340
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 265 SFFLNLRGFLPFQFFTSLAEYVYNSQILKCYFIIFSIFVDIFGW 134
SF L + L + T ++ + N + L CYF +FS+ + W
Sbjct: 17 SFSLVINSILIYLVITKSSKKLGNYRHLMCYFSLFSMVYAVLDW 60
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 378 DILHLYSHQQGNWHFRYQNN 437
DILHL H G + FR NN
Sbjct: 2669 DILHLLKHDAGEYTFRVSNN 2688
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 254 QKEAIPVALLGKDIIGLAETGSGKTGAFALP 346
QK+ I L+G D L TG+GK+ + LP
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLP 282
>Z49886-4|CAA90053.1| 137|Caenorhabditis elegans Hypothetical
protein C06A1.5 protein.
Length = 137
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 80 DKESYGDETNQDSEVEQTPTENVNEDTEDDKI 175
D + + D+ + +E+ P NED +DD +
Sbjct: 11 DNDDFVDDNEMEDVIEEDPQRPDNEDEDDDNV 42
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 65 EKMTADKESYGDETNQDSEVEQTPTENVNEDTED 166
E A+ + ET E PTENV E ED
Sbjct: 193 EVEAANNQKNPTETEPSEETSSVPTENVEESEED 226
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 254 QKEAIPVALLGKDIIGLAETGSGKTGAFALP 346
QK+ I L+G D L TG+GK+ + LP
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLP 282
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Frame = +2
Query: 287 KDIIGLAETGSGKTGAFALPILQALLENPQR--------YFALILTPTRELAFQISEQFE 442
++++ A TG+GKT L IL + E+ + + + P + LA +++E F
Sbjct: 109 ENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFG 168
Query: 443 ALGASIGVKCAVIVG 487
A +G+K + G
Sbjct: 169 KRLAPLGLKVKELTG 183
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 41 IPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDK 172
+ ++D L++ D+E Y DE ++SE ++ E+ ED+E+D+
Sbjct: 872 VEDDSDCLDE-DEDEEEYEDEDEEESEEDEDEEED--EDSEEDE 912
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 41 IPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVNEDTEDDK 172
+ ++D L++ D+E Y DE ++SE ++ E+ ED+E+D+
Sbjct: 872 VEDDSDCLDE-DEDEEEYEDEDEEESEEDEDEEED--EDSEEDE 912
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 98 DETNQDSEVEQTPTENVNEDTEDDKITFKD 187
D+ + DSEV + E+ +ED D++I+ +D
Sbjct: 404 DDEDDDSEVNKNDREDDDEDDVDERISDRD 433
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 98 DETNQDSEVEQTPTENVNEDTEDDKITFKD 187
D+ + DSEV + E+ +ED D++I+ +D
Sbjct: 404 DDEDDDSEVNKNDREDDDEDDVDERISDRD 433
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/82 (21%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +2
Query: 344 PILQALLE-NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMV-AQALM 517
P L+ LL+ +PQ++ ++ T L FQ+ + + +IG C + + ++ L+
Sbjct: 709 PYLRLLLKYDPQQFLNVVSTCADVLLFQLDNRLQRFVDTIGQLCVNMKCELSLIHFLNLV 768
Query: 518 LSKKPHIIIATPGRLVDHLENT 583
+ ++IA P ++H++++
Sbjct: 769 VQLSERVLIAPP---IEHVQDS 787
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/86 (23%), Positives = 38/86 (44%)
Frame = +2
Query: 74 TADKESYGDETNQDSEVEQTPTENVNEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKI 253
T D+ES +E ++D E EN+N E+ + D D + ++ + K KI
Sbjct: 262 TCDEESSDEEYDEDEEEGDDDEENLNNSVEE--LDSDDYASDDNIEKSNNSDQQLKSKKI 319
Query: 254 QKEAIPVALLGKDIIGLAETGSGKTG 331
+ + I V + ++ + K+G
Sbjct: 320 ETQVIKVEEIVEETVTKTTVKRKKSG 345
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,076,816
Number of Sequences: 27780
Number of extensions: 360964
Number of successful extensions: 1540
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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