Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28c22
(400 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 39 2e-04
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 38 6e-04
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 37 0.001
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 37 0.001
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 37 0.001
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 36 0.002
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 36 0.002
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 34 0.009
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 33 0.016
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 33 0.022
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 32 0.029
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 32 0.029
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 31 0.050
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 31 0.050
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.050
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 31 0.066
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 31 0.066
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 31 0.087
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 30 0.12
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 30 0.15
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 30 0.15
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 30 0.15
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 29 0.20
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 29 0.20
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 29 0.27
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 29 0.27
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 29 0.27
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 29 0.27
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 29 0.35
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 29 0.35
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 29 0.35
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 29 0.35
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 28 0.46
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 28 0.46
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 28 0.46
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 28 0.46
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 28 0.61
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 28 0.61
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 0.81
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 27 0.81
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 27 0.81
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 27 1.1
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 27 1.1
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 1.1
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 27 1.4
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 26 1.9
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 26 2.5
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 26 2.5
SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 25 3.3
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 25 3.3
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 25 3.3
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 25 4.3
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 25 4.3
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 25 4.3
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 25 5.7
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 25 5.7
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 24 7.6
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 24 10.0
SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces pombe... 24 10.0
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 39.1 bits (87), Expect = 2e-04
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 36 VFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
+F V+ + V+ L GH + + WS +D L+SC + +V W +G+++
Sbjct: 239 IFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKL 290
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 37.9 bits (84), Expect = 6e-04
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +3
Query: 24 QVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
+ I++++ + Q V L+GH G I L + + +VS +G V WS+SSG+ V
Sbjct: 529 RTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECV 584
Score = 26.6 bits (56), Expect = 1.4
Identities = 11/56 (19%), Positives = 26/56 (46%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
AA +++ ++ S + + ++K H + + + L + G EG V W ++
Sbjct: 78 AAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIA 133
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 37.1 bits (82), Expect = 0.001
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLK-GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS-SG 182
A VNG +++++ + N + K H+G I+C+AWS + TL+ G+ G +Y + + S
Sbjct: 219 ARVNG-FVEIWNRKTKNNRCDYKFHHDGDISCMAWSPINWTLLVGGSTGNIYVYRRTKSM 277
Query: 183 QRVGEVILKTNQFKACAV 236
R I K +Q + C +
Sbjct: 278 MRRVHTIKKVHQEQVCGL 295
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 37.1 bits (82), Expect = 0.001
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 81 HNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
H G + LAW+++ L SCGT+ + W+M SG+
Sbjct: 245 HYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 36.7 bits (81), Expect = 0.001
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 3 FFAAVNGQVIQVFSSVSFQNVYNLK--GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
F AA + ++Q + + F + LK HNG + C+ +S N + L SCG + + W +
Sbjct: 193 FVAAYDSGILQKWD-IRFPKLPFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDST 251
Query: 177 SGQR 188
S ++
Sbjct: 252 SNKK 255
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 36.3 bits (80), Expect = 0.002
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVIL 206
VI ++ S ++V +LKGH+ R+ LAW ND TL S G + + + + E ++
Sbjct: 189 VIYIWDIESTKSVRSLKGHSERVAALAW--NDNTLTSGGKDEVILHHDLRAPGCCAE-MM 245
Query: 207 KTNQFKACAV 236
K ++ + C +
Sbjct: 246 KVHEQEICGL 255
Score = 23.8 bits (49), Expect = 10.0
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTE-GAVYEWSMSSGQRVGEVILKTNQFKACAVN 239
G +T + W+ T ++ GT+ G +Y W + S + V + + + A A N
Sbjct: 164 GATNHVTSVLWTGKG-TQLAVGTDSGVIYIWDIESTKSVRSLKGHSERVAALAWN 217
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 35.9 bits (79), Expect = 0.002
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEW 167
L+GH + C+AWS N L +C + +V+ W
Sbjct: 374 LEGHENEVKCIAWSCNGNYLATCSRDKSVWIW 405
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 33.9 bits (74), Expect = 0.009
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVIL 206
V +V+ + QNV+ L GH + LA D +V+ + + W +++G+ + +
Sbjct: 270 VARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTH 329
Query: 207 KTNQFKACAVNRSEYEY-SHVKINFKH 284
+A +++ E+ + S N KH
Sbjct: 330 HKKTVRALSLHPDEFTFASGSSDNIKH 356
Score = 24.6 bits (51), Expect = 5.7
Identities = 15/61 (24%), Positives = 24/61 (39%)
Frame = +3
Query: 3 FFAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
F + I+++ S L GH + LA S L SCG + V W + +
Sbjct: 178 FCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETN 237
Query: 183 Q 185
+
Sbjct: 238 K 238
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 33.1 bits (72), Expect = 0.016
Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGT-EGAVYEWSMSSGQRVGEVI 203
+ +KGH ++C+AW A D ++++ G+ + + W G +G+ +
Sbjct: 170 IATMKGHTNWVSCVAW-APDASIIATGSMDNTIRFWDPKKGSPIGDAL 216
Score = 27.9 bits (59), Expect = 0.61
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWS 170
++V+ S + ++L GH ++ + WS + + S G + AV WS
Sbjct: 455 LKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 25.8 bits (54), Expect = 2.5
Identities = 10/41 (24%), Positives = 18/41 (43%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
++ L GH ITC+ W + + S + + W G+
Sbjct: 262 LFTLSGHTAPITCVRWGGQN-WIYSSSYDKTIRIWDAKDGK 301
Score = 25.0 bits (52), Expect = 4.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
L+GH + AWS + LVS + + W + S
Sbjct: 427 LRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRS 462
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 32.7 bits (71), Expect = 0.022
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNRS 245
L+GH +T + ++ + L SC + + W +G+R+G T C +N+S
Sbjct: 6 LQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKS 63
Score = 27.1 bits (57), Expect = 1.1
Identities = 13/62 (20%), Positives = 30/62 (48%)
Frame = +3
Query: 6 FAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
F+ +VI V+ S + + + +GH G I + + +VS + + W + +G+
Sbjct: 26 FSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTGK 85
Query: 186 RV 191
++
Sbjct: 86 QL 87
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.029
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +3
Query: 3 FFAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEW 167
FF +Q+ S + VY++K HN C+ +S ++ L G + W
Sbjct: 167 FFMTTGLGTVQIMEWPSLKRVYDIKAHNSNCFCIEFSPDNRHLAIGGADAITSLW 221
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 32.3 bits (70), Expect = 0.029
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 15 VNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVG 194
VNG V+ ++ +F L GH I + WS+ D L++ + W + G V
Sbjct: 44 VNGSVV-IWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLTASRDWKCILWDLRDGSIVY 102
Query: 195 EVILKTNQFKA 227
+V+L + A
Sbjct: 103 QVVLSAPVWSA 113
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 31.5 bits (68), Expect = 0.050
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
GH +T +A + + T+ S +EG ++ W + +G+R+
Sbjct: 503 GHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRI 540
Score = 29.5 bits (63), Expect = 0.20
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 57 QNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
+ + ++GH G I L++S LVS G++ V W +
Sbjct: 538 RRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.050
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 33 QVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
+V+ S+S + + +L GH RI+ LA +++ L + + V WS S
Sbjct: 257 EVWDSISSKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLWSSS 304
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 31.5 bits (68), Expect = 0.050
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 48 VSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
++ + L+GH+ + LAW ++ L L S G + V W S
Sbjct: 292 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 335
Score = 29.5 bits (63), Expect = 0.20
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 18 NGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCG---TEGAVYEWSMSSGQR 188
N V+Q++ + S + HN + +AW L++ G + ++ W+ ++G R
Sbjct: 324 NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 383
Query: 189 VGEV 200
V V
Sbjct: 384 VNTV 387
Score = 27.1 bits (57), Expect = 1.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 18 NGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVY 161
NG ++ ++ S + + GH R+ CL+W N L S GA++
Sbjct: 242 NG-LVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIH 286
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 31.1 bits (67), Expect = 0.066
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQR 188
A +G+V VF + VY + H G I ++WS + V+ + W ++G
Sbjct: 207 AGADGKVY-VFDGKTGDQVYEIDAHKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSL 265
Query: 189 VGE 197
+ E
Sbjct: 266 IRE 268
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 31.1 bits (67), Expect = 0.066
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQ 218
V +LK H ++CLA ++ ++S + VY W +++G + ++ Q
Sbjct: 225 VTSLKKHTAPVSCLALHGSEKKVLSGSWDKMVYYWDLNTGDAISTYNCESGQ 276
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 30.7 bits (66), Expect = 0.087
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
GH GR+ CL+ + L S G +G + W + +G+ V
Sbjct: 377 GHKGRVRCLSVHVSGNWLASGGDDGVLRIWEVMTGRCV 414
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 30.3 bits (65), Expect = 0.12
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 24 QVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVI 203
Q+I+V+S VS V L+GH + +A+S + L+S + + W + + + VG
Sbjct: 465 QIIRVWS-VSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSA 523
Query: 204 LK 209
+K
Sbjct: 524 IK 525
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 29.9 bits (64), Expect = 0.15
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
L+GH GR+ + + + +S GT+ + W++ SG+
Sbjct: 613 LRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGE 650
Score = 24.2 bits (50), Expect = 7.6
Identities = 10/51 (19%), Positives = 28/51 (54%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
I++++ S + + L GH+ ++ + ++ N L S + ++ W +++G
Sbjct: 641 IRIWNLESGELLQTLHGHSNLVSQVTFNQNILVSASAPPDTSLRVWDLNTG 691
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 29.9 bits (64), Expect = 0.15
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +3
Query: 51 SFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEV 200
++++ L GH+ I L WS + +VS G + ++ W+ ++ +R+ +
Sbjct: 123 NWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRI 172
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.15
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQR 188
VI S+ F N L H + L+W+ N L+S G EG + W M + R
Sbjct: 244 VINDISNEKF-NPQILHWHANPLNGLSWALNGEYLLSGGQEGVLVLWQMETSHR 296
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 29.5 bits (63), Expect = 0.20
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 3 FFAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEW 167
F + N VI++++S + +Y L GH + L + N + SCG + + W
Sbjct: 189 FASCSNDGVIKLWTSDG-EFLYELHGHTSFVYSLTYIHNQQLIASCGEDRTIRIW 242
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 29.5 bits (63), Expect = 0.20
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEV 200
V L GH+ R+T +S LV+ +G + W + +G + +
Sbjct: 565 VRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDSI 610
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 29.1 bits (62), Expect = 0.27
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 54 FQNVYNLKGHNGRITCLAWSAND-LTLVSCGTEGAVYEWSMSSGQRVGE 197
+Q ++ L+GH + L WS +D L S T+ V W + +++GE
Sbjct: 315 YQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDL---EKIGE 360
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 29.1 bits (62), Expect = 0.27
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 21 GQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYE-WSMSSGQRVGE 197
GQ+ +F N + H+ I+CL S + S T G + W+ +G+++ E
Sbjct: 154 GQLQILFLFKDHMNTSIVPAHDSEISCLGISKTGSKIASSSTNGTLIRIWNSETGEKICE 213
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.27
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 48 VSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
+SF L+GH + A+SA+ LV+ ++ W +SSG+ +
Sbjct: 247 MSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSGETI 294
Score = 26.6 bits (56), Expect = 1.4
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 3 FFAAVNGQVIQVF--SSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
F AA ++++ ++ S + +GH +T +A+ + L + +G V W M
Sbjct: 54 FLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDM 112
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 29.1 bits (62), Expect = 0.27
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 42 SSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
SS + +Y L GH+ I C+ N +CG+E ++ W ++
Sbjct: 162 SSQPSRLLYKLTGHSRGIECITRQPNTDIFWTCGSESSIRCWHIT 206
Score = 25.0 bits (52), Expect = 4.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
V L GH + CL + L+S T+ ++ W +SS
Sbjct: 125 VETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSS 163
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 28.7 bits (61), Expect = 0.35
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = +3
Query: 36 VFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
VF V V N G G IT L WS + + ++ + W SGQ++
Sbjct: 79 VFGDVKNYGVLN--GCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKI 128
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 28.7 bits (61), Expect = 0.35
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKAC 230
GHN + ++WS ND L S + V W S + + + + N+ C
Sbjct: 253 GHNAEVLSISWSKNDFLLTS-SADRTVRLWHPKSTKSL--AVFRHNEIVTC 300
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 28.7 bits (61), Expect = 0.35
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
AA + ++I ++ +S V L+GH I +A++ L+S EG + W + +
Sbjct: 204 AAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIKIWDIDT 260
Score = 25.8 bits (54), Expect = 2.5
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEV 200
L GH + +A+S L + G + + + SG +VG++
Sbjct: 183 LSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQL 225
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 28.7 bits (61), Expect = 0.35
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 15 VNGQVIQVFSSVSFQNVYNL-KGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
V Q I+++ ++ + VY L GH I L +S + TLVS + V W + +G++
Sbjct: 353 VEDQQIRIWD-IAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQ- 410
Query: 192 GEVILKTN 215
++IL T+
Sbjct: 411 -KLILHTD 417
Score = 23.8 bits (49), Expect = 10.0
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 24 QVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVI 203
+VI++++S S V L GH + +A+S + LVS + + W + V +
Sbjct: 439 KVIRIWTS-SGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSM 497
Query: 204 LK 209
K
Sbjct: 498 YK 499
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 28.3 bits (60), Expect = 0.46
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
AA N +V+++++ S ++ GH I L + SCG + + W +++G+
Sbjct: 31 AAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGK 89
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 28.3 bits (60), Expect = 0.46
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
I++++ +FQ V L+GH+ +TCL + + L+S + + W+ + +
Sbjct: 295 IRLWNLATFQQVALLEGHSSGVTCLQF--DQCKLISGSMDKTIRIWNYRTSE 344
Score = 24.6 bits (51), Expect = 5.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
I+++S + ++ H G + LA + D L SC +G + +W +
Sbjct: 416 IKIWSLETNTCLHTFSAHIGPVQSLALA--DSRLFSCSLDGTIKQWDI 461
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 0.46
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 42 SSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWS 170
S F L GH +TC++ S N + + ++G + WS
Sbjct: 40 SHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWS 82
Score = 24.6 bits (51), Expect = 5.7
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEW 167
I+++S+++F+ L GH I+ + W+ L S + + W
Sbjct: 78 IKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIW 123
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 28.3 bits (60), Expect = 0.46
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVI 203
L GH + +S + T+ + +GA++ W S + GEVI
Sbjct: 186 LTGHKNTVVSGFFSKDQQTIYTVSKDGALFVWKYSPLFQAGEVI 229
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 0.61
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 3 FFAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCG-TEGAVYEWSMS 176
F NG V + ++V+ L+ H+G I+CL+ + + + V+ G T+ V W+ S
Sbjct: 356 FIGTDNGIVYYCDARNLSKSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTS 414
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 27.9 bits (59), Expect = 0.61
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILK 209
+GH G + + +S + S G + + W + +GQ V I K
Sbjct: 266 EGHTGPVMDIVFSDDPSVAYSVGQDHTIKTWDLITGQNVDSKITK 310
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 0.81
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +3
Query: 12 AVNGQVI-----QVFSSVSFQNVYNLKGHNGRITCLAWSANDLT--LVSCGTEGAVYEWS 170
A NGQV Q VSF + + GH +T + + N + +V+C T+G V+ W
Sbjct: 263 AYNGQVFLWDLRQGQYPVSFTTIIS-GGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWE 321
Query: 171 MSSGQRVGEVILKTNQ 218
R E I ++Q
Sbjct: 322 PDMFSRPSETICLSSQ 337
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 27.5 bits (58), Expect = 0.81
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEW 167
+Y L GH+G + CL + LVS ++ + W
Sbjct: 254 LYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIW 288
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 27.5 bits (58), Expect = 0.81
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +3
Query: 57 QNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
+ + L GH I + WS + + + G + V W S+G
Sbjct: 95 EQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTG 136
Score = 26.6 bits (56), Expect = 1.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 93 ITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
I L+W L L + +G+++ WS+ SG+ V
Sbjct: 149 IVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVV 181
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 27.1 bits (57), Expect = 1.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
+ +++ S V LKGH R+ LA S N +V+ + + W +
Sbjct: 486 VALWNYPSVSRVGTLKGHTDRVLYLAMSPNGENIVTGAADETLRFWKL 533
Score = 25.8 bits (54), Expect = 2.5
Identities = 17/79 (21%), Positives = 35/79 (44%)
Frame = +3
Query: 18 NGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGE 197
NG V +++ + + + + GH R+ L+W ND L S G + + + + +
Sbjct: 312 NGSV-EIWDAATCKKTRTMSGHTERVGALSW--NDHVLSSGGRDNHILHRDVRAPEHYFR 368
Query: 198 VILKTNQFKACAVNRSEYE 254
V+ Q + C + + E
Sbjct: 369 VLTAHRQ-EVCGLEWNSNE 386
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 27.1 bits (57), Expect = 1.1
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
IQ++ VS + + +L GH + + S + T+++ ++ + WS+
Sbjct: 198 IQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIKLWSL 245
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 1.1
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 33 QVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSC-GTEGAVYEWSM 173
+VF + ++V L+GH + C+ W L++ G++G+V +S+
Sbjct: 275 RVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGSDGSVNHYSL 322
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 26.6 bits (56), Expect = 1.4
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 24 QVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
Q I++++ S + L GH+ + C A+ ++ +VS + V W +S
Sbjct: 117 QTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 26.2 bits (55), Expect = 1.9
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Frame = +3
Query: 21 GQVIQVFSSVSFQNVYNLKGHNGRIT-------CLAWSAN--DLTLVSCGTEGAVYEWSM 173
G ++V++S + V +GH R++ C AW A+ LTL + + V W
Sbjct: 193 GGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKA 252
Query: 174 S 176
S
Sbjct: 253 S 253
Score = 25.8 bits (54), Expect = 2.5
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +3
Query: 18 NGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
N + +++ S +++ L H +I +AWS N L + + V W +
Sbjct: 327 NDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDL 378
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 2.5
Identities = 11/51 (21%), Positives = 28/51 (54%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
I+++ + + +Y+L+GH+ RI + + +S + ++ W +S+G
Sbjct: 529 IRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG 579
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 25.8 bits (54), Expect = 2.5
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +3
Query: 18 NGQVIQVFSSVS--FQNVYNLKGHNGRITCLAWSANDLTL-VSCGTEGAVYEWSMSSGQR 188
+G +I FS +N+YN KGH IT W + + ++ G + W ++ +
Sbjct: 173 DGSLIVRFSKGDQYIRNMYNTKGHIAEITDGCWQPDSSQIFLTTGYDSTARIWDVNRTKS 232
Query: 189 VGEVIL 206
EV +
Sbjct: 233 QLEVFV 238
>SPAC1006.02 |||WD repeat protein, human GNB1L
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 3.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 66 YNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
Y L+GH+ +T + + AN+ L S G V W ++S
Sbjct: 8 YVLRGHSSSVTSVLFDANEY-LYSGDEAGFVICWCLTS 44
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.4 bits (53), Expect = 3.3
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNRSEY 251
L GH RITC+ +VS G + W ++ + V + + + AVN
Sbjct: 2338 LYGHRYRITCVTVCKAFSIIVSGDAGGNLIIWDLNRAEFVSSLSVYKLPIQTIAVNARNA 2397
Query: 252 E 254
E
Sbjct: 2398 E 2398
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.4 bits (53), Expect = 3.3
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +3
Query: 57 QNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
Q L+GH I C+ ++++ L+S + ++ W ++S
Sbjct: 92 QETLVLEGHEHNIPCITFNSSGTLLLSGSIDRSLQIWDITS 132
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.0 bits (52), Expect = 4.3
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
A++ ++V+ S + NL GH + + S + LV+C + V W + G
Sbjct: 551 ASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADKNVKIWGLDFG 608
Score = 23.8 bits (49), Expect = 10.0
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = +3
Query: 3 FFAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLA 107
FF + ++ + SF + L+GH+ + LA
Sbjct: 633 FFTCSKDREVRYWDGKSFDLILKLRGHHSEVWALA 667
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.0 bits (52), Expect = 4.3
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
L GH G + L WSA+ L+S + + W +
Sbjct: 41 LTGHTGCVNTLDWSADGEFLLSGSDDTRLIVWDV 74
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 25.0 bits (52), Expect = 4.3
Identities = 14/71 (19%), Positives = 31/71 (43%)
Frame = +3
Query: 3 FFAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
F +A + ++V+ +F + GH G ++ + S + S G +G + W ++
Sbjct: 165 FVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNES 224
Query: 183 QRVGEVILKTN 215
+ + K N
Sbjct: 225 THLYSLEAKAN 235
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 24.6 bits (51), Expect = 5.7
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +2
Query: 5 FCSSKWPSDPSFFLSFISKCL*FKRTQWENNVF 103
F S P DP FF +F SK K E NVF
Sbjct: 359 FYESPRPKDPKFFPTFPSKA---KGESKEKNVF 388
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 24.6 bits (51), Expect = 5.7
Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 69 NLKGHNGRITCLAWSA-NDLTLVSCGTEGAVYEWSM 173
++ H+G I +A++ ND L +C T+ + W +
Sbjct: 276 SVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDL 311
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 24.2 bits (50), Expect = 7.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
GH G + C+ + S G +G + WS+ + Q
Sbjct: 337 GHEGPVLCVCVPKATHHIFSGGHDGTIRCWSLPANQ 372
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 23.8 bits (49), Expect = 10.0
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 84 NGRITCLAWSANDLTLVSCGTE 149
+ R+ C++WS N+L V E
Sbjct: 205 SARVPCMSWSGNELDQVRIDEE 226
>SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 23.8 bits (49), Expect = 10.0
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLK 77
+I ++SSVSF +VYN K
Sbjct: 46 MIVIYSSVSFLSVYNEK 62
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,613,808
Number of Sequences: 5004
Number of extensions: 30268
Number of successful extensions: 163
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 134126124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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