Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28c22
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           35   0.001
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    24   2.4  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 35.1 bits (77), Expect = 0.001
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 66  YNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTN 215
           YNL+GH   +  + W+     L SC + G ++ W    G+   E+I   N
Sbjct: 58  YNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWSVELINDRN 107


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 323 NPLINSVYKINVLMWIQLNLFNL 391
           N L+ S+  I  + W+ LNLFNL
Sbjct: 272 NYLLISIALIFGVSWLPLNLFNL 294


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,780
Number of Sequences: 2352
Number of extensions: 6103
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)