Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28c22
(400 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 42 2e-04
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 41 3e-04
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 41 3e-04
Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical pr... 40 9e-04
AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeri... 40 9e-04
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 39 0.002
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 38 0.003
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 37 0.005
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 37 0.005
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 37 0.005
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 37 0.006
U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated p... 36 0.014
U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated p... 36 0.014
AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein. 36 0.014
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical pr... 35 0.025
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 35 0.025
X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein. 35 0.025
AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeri... 35 0.025
AF016448-16|AAM45377.1| 394|Caenorhabditis elegans Atg (autopha... 35 0.025
AF016448-15|AAB65961.1| 412|Caenorhabditis elegans Atg (autopha... 35 0.025
U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical pr... 34 0.033
Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 33 0.057
Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical pr... 33 0.100
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 33 0.100
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 33 0.100
AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation... 31 0.30
Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical pr... 31 0.40
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 30 0.53
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 30 0.53
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 30 0.53
U42438-1|AAN84876.1| 459|Caenorhabditis elegans Maternal effect... 30 0.53
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 30 0.53
AF016224-1|AAC27121.1| 459|Caenorhabditis elegans WD-40 repeat ... 30 0.53
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 30 0.70
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 30 0.70
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 30 0.70
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 30 0.70
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 30 0.70
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 29 0.93
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 29 0.93
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 28 2.1
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 28 2.1
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 28 2.8
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 28 2.8
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 27 3.7
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 27 3.7
Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein. 27 5.0
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 27 5.0
Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical p... 27 5.0
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 27 5.0
AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical ... 27 5.0
AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical ... 27 5.0
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 27 6.5
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 27 6.5
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 6.5
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 27 6.5
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 6.5
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 27 6.5
AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical ... 27 6.5
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 27 6.5
Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 26 8.7
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 26 8.7
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 26 8.7
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 26 8.7
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 26 8.7
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 12 AVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
A + ++VFS+V Q ++ L GH G++ L + +D L + T+ V+ + + +GQ +
Sbjct: 1055 ACEDETLKVFSTVGGQELHELMGHEGKVNSLVCAQDDCQLFA-ATKSKVFCYDIHNGQMI 1113
Query: 192 GEVILKTNQFKACAVNRSEYEY 257
+V+ F C++ S Y
Sbjct: 1114 -DVLDTAQPFPICSLKISSDNY 1134
Score = 32.7 bits (71), Expect = 0.100
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTL-VSCGTEGAVYEWSMSSGQRVGEVI 203
VI + S Q + KGH +TCL S+ND +L VS + V W S +
Sbjct: 892 VIYAYHIASEQLIGTFKGHTAAVTCLC-SSNDSSLFVSTSFDKTVNVWVFSQSTPTMSLT 950
Query: 204 LKTNQFKACAVNRSEYEY 257
T + CA+ S+ +Y
Sbjct: 951 HHTAKV-TCAILTSDDQY 967
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRV 191
L GH +TC S ++ +VS + + W++ SG V
Sbjct: 1374 LVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSGDMV 1413
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 57 QNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
+N +KGH+G + L ++ + +LVSCGT+ +V W M +G
Sbjct: 72 ENFSTIKGHSGAVMDLKFTTDSSSLVSCGTDKSVRVWDMETG 113
Score = 34.3 bits (75), Expect = 0.033
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVY 161
A + + + V+ ++S + VY L GH G + C + + ++SCG++ V+
Sbjct: 274 AGSSDRFLYVWETLSKKIVYKLPGHMGSVNCTDFHPKEPIMLSCGSDKRVF 324
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 41.1 bits (92), Expect = 3e-04
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 18 NGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLT-LVSCGTEGAVYEWSMSSGQ 185
+G+V+ ++S + Y+L GH G + +AW+ D T LVSCG + + WS+ +
Sbjct: 544 HGRVV-IWSVQDSRPRYSLVGHRGHVNAVAWNPADPTMLVSCGADATIRVWSLDRSE 599
>Z71263-5|CAA95824.1| 356|Caenorhabditis elegans Hypothetical
protein F52A8.2 protein.
Length = 356
Score = 39.5 bits (88), Expect = 9e-04
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNRS 245
LKGH G++ C+ WS + +VS +G V W + + + + T ACA + S
Sbjct: 64 LKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPS 121
>AF291847-1|AAK55964.1| 356|Caenorhabditis elegans heterotrimeric G
protein beta subunit2 protein.
Length = 356
Score = 39.5 bits (88), Expect = 9e-04
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNRS 245
LKGH G++ C+ WS + +VS +G V W + + + + T ACA + S
Sbjct: 64 LKGHVGKVLCMDWSLDKRHIVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPS 121
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +3
Query: 54 FQNVYNLKGHNGRITCLAWS-ANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKAC 230
F+ LKGH G ++WS + L++ G +G + W +++ Q + I+ ++FK
Sbjct: 161 FRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGH 220
Query: 231 AVNRSEYEYSHVKINF 278
+ N + + H NF
Sbjct: 221 SSNAEDVSF-HALHNF 235
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 37.9 bits (84), Expect = 0.003
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 57 QNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAV 236
+N LKGH G I + ++A+ LVS GT+ V W M +G + T+ + V
Sbjct: 70 ENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDV 129
Query: 237 NR 242
NR
Sbjct: 130 NR 131
Score = 29.9 bits (64), Expect = 0.70
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVY 161
+ V+++ S VY L GH G + C A L+S G++ ++
Sbjct: 279 VYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIF 322
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 18 NGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
N V++V S + + ++GH+ IT + +S ++SC T+G++ W SG+
Sbjct: 327 NDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGE 382
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 37.1 bits (82), Expect = 0.005
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +3
Query: 18 NGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
N V++V S + + ++GH+ IT + +S ++SC T+G++ W SG+
Sbjct: 327 NDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGE 382
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 37.1 bits (82), Expect = 0.005
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQF 221
++ K H + C+AWS + + S G + W+ +G+++G+ + + Q+
Sbjct: 140 LHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQW 192
Score = 30.3 bits (65), Expect = 0.53
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSA--NDLT---LVSCGTEGAVYEWSM 173
A NG++ + Q LK H IT LAW D T L SCG +G ++ W
Sbjct: 165 ACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDT 224
Query: 174 SSG 182
G
Sbjct: 225 VQG 227
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
I ++ +V V L GH +TCL W L + S + V W G
Sbjct: 219 IFIWDTVQGTVVRCLSGHTASVTCLRWGGEGL-IYSGSQDRTVKMWRADDG 268
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEW 167
++VF + Y+L GH + + WS +VS G + + W
Sbjct: 426 LKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 36.7 bits (81), Expect = 0.006
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 66 YNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEW 167
+NL+GH+ I + W+ + L SC G +Y W
Sbjct: 63 FNLRGHHNAIRMVTWNKSQSKLASCDASGIIYVW 96
>U42835-5|AAO61444.1| 517|Caenorhabditis elegans Uncoordinated
protein 78, isoform b protein.
Length = 517
Score = 35.5 bits (78), Expect = 0.014
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
GHN IT L+ SA+ TL S EG + W +S+G
Sbjct: 322 GHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +3
Query: 6 FAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
+ V+G VF S +NV H+G + L WS + + S + + W++++
Sbjct: 217 YNGVDGTKTGVFEDDSLKNV----AHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270
>U42835-4|AAA83588.1| 611|Caenorhabditis elegans Uncoordinated
protein 78, isoform a protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.014
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
GHN IT L+ SA+ TL S EG + W +S+G
Sbjct: 322 GHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356
Score = 29.5 bits (63), Expect = 0.93
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = +3
Query: 81 HNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
H ++ C++WS +++ L + + +V W+M+
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 566
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +3
Query: 6 FAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
+ V+G VF S +NV H+G + L WS + + S + + W++++
Sbjct: 217 YNGVDGTKTGVFEDDSLKNV----AHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270
>AF324437-1|AAK11613.1| 611|Caenorhabditis elegans UNC-78 protein.
Length = 611
Score = 35.5 bits (78), Expect = 0.014
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
GHN IT L+ SA+ TL S EG + W +S+G
Sbjct: 322 GHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356
Score = 29.5 bits (63), Expect = 0.93
Identities = 8/32 (25%), Positives = 20/32 (62%)
Frame = +3
Query: 81 HNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
H ++ C++WS +++ L + + +V W+M+
Sbjct: 535 HTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 566
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +3
Query: 6 FAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
+ V+G VF S +NV H+G + L WS + + S + + W++++
Sbjct: 217 YNGVDGTKTGVFEDDSLKNV----AHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 35.1 bits (77), Expect = 0.019
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +3
Query: 6 FAAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWS 170
F + GQ +QV S+ V +L H+G +T + + N +LV+C + ++ +S
Sbjct: 437 FLGIGGQKVQVLHVKSWSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +3
Query: 57 QNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWS 170
Q + KGHN +I + +++T +S + + WS
Sbjct: 242 QVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWS 279
>Z49127-9|CAA88948.1| 340|Caenorhabditis elegans Hypothetical
protein F13D12.7 protein.
Length = 340
Score = 34.7 bits (76), Expect = 0.025
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACA 233
L+GH +I + W+++ LVS +G + W + +V + L+++ CA
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCA 104
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 34.7 bits (76), Expect = 0.025
Identities = 17/78 (21%), Positives = 38/78 (48%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQR 188
+A + + +++F V+ + LKGHN + C ++ +VS + +V W + +G
Sbjct: 146 SASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC 205
Query: 189 VGEVILKTNQFKACAVNR 242
+ + ++ A + NR
Sbjct: 206 IKTLPAHSDPVSAVSFNR 223
>X17497-1|CAA35532.1| 340|Caenorhabditis elegans G-protein protein.
Length = 340
Score = 34.7 bits (76), Expect = 0.025
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACA 233
L+GH +I + W+++ LVS +G + W + +V + L+++ CA
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCA 104
>AF291846-1|AAK55963.1| 340|Caenorhabditis elegans heterotrimeric G
protein beta subunit1 protein.
Length = 340
Score = 34.7 bits (76), Expect = 0.025
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACA 233
L+GH +I + W+++ LVS +G + W + +V + L+++ CA
Sbjct: 51 LRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCA 104
>AF016448-16|AAM45377.1| 394|Caenorhabditis elegans Atg (autophagy)
related protein18, isoform b protein.
Length = 394
Score = 34.7 bits (76), Expect = 0.025
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYE-WSMSSGQRVGE--- 197
+ +F +++ +V H G I CL ++ + + T+G V +S+ +G R+ E
Sbjct: 170 VHLFDAINLSSVSTFNAHEGTIACLKFNQEGNMIATASTKGTVIRVYSVPNGHRLFEFRR 229
Query: 198 -VILKTNQFKACAVNRSEYEYSHVKINFKHKF 290
V N + C + S+Y S H F
Sbjct: 230 GVTRCVNIYSLCFSSDSKYLTSSSNTETVHVF 261
>AF016448-15|AAB65961.1| 412|Caenorhabditis elegans Atg (autophagy)
related protein18, isoform a protein.
Length = 412
Score = 34.7 bits (76), Expect = 0.025
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYE-WSMSSGQRVGE--- 197
+ +F +++ +V H G I CL ++ + + T+G V +S+ +G R+ E
Sbjct: 170 VHLFDAINLSSVSTFNAHEGTIACLKFNQEGNMIATASTKGTVIRVYSVPNGHRLFEFRR 229
Query: 198 -VILKTNQFKACAVNRSEYEYSHVKINFKHKF 290
V N + C + S+Y S H F
Sbjct: 230 GVTRCVNIYSLCFSSDSKYLTSSSNTETVHVF 261
>U40410-5|AAA81394.3| 1199|Caenorhabditis elegans Hypothetical
protein C54G7.4 protein.
Length = 1199
Score = 34.3 bits (75), Expect = 0.033
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQ 218
L+GHN + W+ N+ L + T G + W M + Q E+I N+
Sbjct: 65 LEGHNATVMNATWNENNQKLTTSDTSGLIIVWGMFNEQWCEEMINNRNK 113
>Z47808-9|CAI46561.1| 425|Caenorhabditis elegans Hypothetical
protein D2013.8b protein.
Length = 425
Score = 33.9 bits (74), Expect = 0.043
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDL-TLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKA 227
+GH I +A D T VSC EG VY W+ +GQR L+ N+ +A
Sbjct: 67 QGHRFPIESVAIDPEDTSTFVSCCQEGVVYVWNTQTGQRT----LRINRLRA 114
>Z47808-8|CAA87777.2| 1087|Caenorhabditis elegans Hypothetical
protein D2013.8a protein.
Length = 1087
Score = 33.9 bits (74), Expect = 0.043
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDL-TLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKA 227
+GH I +A D T VSC EG VY W+ +GQR L+ N+ +A
Sbjct: 729 QGHRFPIESVAIDPEDTSTFVSCCQEGVVYVWNTQTGQRT----LRINRLRA 776
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 33.5 bits (73), Expect = 0.057
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNRS 245
L GH I +WS++ +VSC + V + +SSG+ V + TN C N S
Sbjct: 144 LMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPS 201
>Z81099-1|CAB03187.1| 600|Caenorhabditis elegans Hypothetical
protein K08F9.2 protein.
Length = 600
Score = 32.7 bits (71), Expect = 0.100
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
+GHN IT L+ S++ L S EG + W +SSG
Sbjct: 319 QGHNKAITALSKSSDGKFLFSADAEGHITTWEISSG 354
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 81 HNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS 179
H G I LAWS + + + + +V W +S+
Sbjct: 236 HTGSIFALAWSPDQSRIATASADKSVKIWDVSA 268
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 32.7 bits (71), Expect = 0.100
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 81 HNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
HNG C W+++ L+S G +G V WS S
Sbjct: 103 HNGAALCARWNSDGTGLLSSGEDGFVKMWSRS 134
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 32.7 bits (71), Expect = 0.100
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 81 HNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
HNG C W+++ L+S G +G V WS S
Sbjct: 103 HNGAALCARWNSDGTGLLSSGEDGFVKMWSRS 134
>AF016452-10|AAB66019.1| 620|Caenorhabditis elegans Gastrulation
defective protein 1 protein.
Length = 620
Score = 31.1 bits (67), Expect = 0.30
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKT---NQFKA 227
K HNG IT +A+S + L+S G + + WS+ + + +++KT N FK+
Sbjct: 322 KAHNGSITSIAFSPDSKRLLSRGFDDTLKMWSLDNPKE--PLLVKTGLENAFKS 373
>Z47358-8|CAA87433.1| 702|Caenorhabditis elegans Hypothetical
protein ZK1307.6 protein.
Length = 702
Score = 30.7 bits (66), Expect = 0.40
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDL 125
V Q++ + + L GH+ R+ CLAW+A+ +
Sbjct: 461 VTQIWDVTTQKKTRELTGHSSRVGCLAWNADTI 493
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 30.7 bits (66), Expect = 0.40
Identities = 15/74 (20%), Positives = 37/74 (50%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVIL 206
VI ++ ++ + ++ L GH +T + + D ++S + + WS++S V+
Sbjct: 126 VIVLWDILAERGMFRLHGHKESVTQMKFVRGDRFIISTSKDSLIKFWSIASQSCFYTVMD 185
Query: 207 KTNQFKACAVNRSE 248
N+ + +++R E
Sbjct: 186 SRNEIYSMSLHRDE 199
Score = 26.2 bits (55), Expect = 8.7
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
GH + C+ +S++ L + G +G + W +
Sbjct: 101 GHKKAVNCIEFSSDGLLFATGGKDGVIVLWDI 132
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 30.3 bits (65), Expect = 0.53
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 24 QVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVG--- 194
+ ++V+S+V ++ L+GH + C+A + + LV+ + + W + SG+ +
Sbjct: 316 RTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVWDVESGRHLATLH 373
Query: 195 --EVILKTNQFKACAVNRSEYEYSHVKI 272
++ QF V Y+++ VKI
Sbjct: 374 GHHAAVRCVQFDGTTVVSGGYDFT-VKI 400
Score = 29.5 bits (63), Expect = 0.93
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVI 203
V+ L GH IT L W ++ S +G V W + G + +++
Sbjct: 494 VHMLSGHRSAITSLQWFGRNMVATS-SDDGTVKLWDIERGALIRDLV 539
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 30.3 bits (65), Expect = 0.53
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 24 QVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVG--- 194
+ ++V+S+V ++ L+GH + C+A + + LV+ + + W + SG+ +
Sbjct: 318 RTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVWDVESGRHLATLH 375
Query: 195 --EVILKTNQFKACAVNRSEYEYSHVKI 272
++ QF V Y+++ VKI
Sbjct: 376 GHHAAVRCVQFDGTTVVSGGYDFT-VKI 402
Score = 29.5 bits (63), Expect = 0.93
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVI 203
V+ L GH IT L W ++ S +G V W + G + +++
Sbjct: 496 VHMLSGHRSAITSLQWFGRNMVATS-SDDGTVKLWDIERGALIRDLV 541
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.3 bits (65), Expect = 0.53
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +3
Query: 12 AVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWS-ANDLTLVSCG----TEGAVYEWSMS 176
A N VI + SF V+NL+ RI +AW+ D + CG + V+EW
Sbjct: 291 AFNNGVIVLHEIPSFALVHNLRVSEMRIQTVAWNLTGDWLAIGCGKGSTAQLVVWEWQSE 350
Query: 177 S 179
S
Sbjct: 351 S 351
>U42438-1|AAN84876.1| 459|Caenorhabditis elegans Maternal effect
sterile protein 6 protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.53
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
L+ H G I + WS + ++SCG + + EW +S Q
Sbjct: 190 LECHAGTILSVDWSTDGDFILSCGFDHQLMEWDLSVKQ 227
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 30.3 bits (65), Expect = 0.53
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 24 QVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVG--- 194
+ ++V+S+V ++ L+GH + C+A + + LV+ + + W + SG+ +
Sbjct: 318 RTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGS--ILVTGSRDTTLRVWDVESGRHLATLH 375
Query: 195 --EVILKTNQFKACAVNRSEYEYSHVKI 272
++ QF V Y+++ VKI
Sbjct: 376 GHHAAVRCVQFDGTTVVSGGYDFT-VKI 402
Score = 29.5 bits (63), Expect = 0.93
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVI 203
V+ L GH IT L W ++ S +G V W + G + +++
Sbjct: 496 VHMLSGHRSAITSLQWFGRNMVATS-SDDGTVKLWDIERGALIRDLV 541
>AF016224-1|AAC27121.1| 459|Caenorhabditis elegans WD-40 repeat
protein protein.
Length = 459
Score = 30.3 bits (65), Expect = 0.53
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
L+ H G I + WS + ++SCG + + EW +S Q
Sbjct: 190 LECHAGTILSVDWSTDGDFILSCGFDHQLMEWDLSVKQ 227
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 0.70
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 48 VSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKA 227
+S + + L GH+ ITCL + LVS + V W +S + ++ + A
Sbjct: 573 LSMKKLSVLNGHSDAITCLVSCQSHAVLVSASRDLTVLVWHLSEMFLIRQLPKHPHAVLA 632
Query: 228 CAVN 239
AVN
Sbjct: 633 VAVN 636
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 29.9 bits (64), Expect = 0.70
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 8/49 (16%)
Frame = +3
Query: 78 GHNGRITCL-----AWSAND---LTLVSCGTEGAVYEWSMSSGQRVGEV 200
GH+ + C A++ ND L +VSC +G V WS+S +GE+
Sbjct: 244 GHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGEL 292
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 30 IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
++++S+ +Q + L+GH+ RI C+ S + + S + W+ S
Sbjct: 446 LKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWAQS 494
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 29.9 bits (64), Expect = 0.70
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 48 VSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKA 227
+S + + L GH+ ITCL + LVS + V W +S + ++ + A
Sbjct: 573 LSMKKLSVLNGHSDAITCLVSCQSHAVLVSASRDLTVLVWHLSEMFLIRQLPKHPHAVLA 632
Query: 228 CAVN 239
AVN
Sbjct: 633 VAVN 636
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 29.9 bits (64), Expect = 0.70
Identities = 12/62 (19%), Positives = 26/62 (41%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNR 242
V L GH ++C W A +V+ + W + G+ V + ++ C+ +
Sbjct: 273 VMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILSGHESELNHCSTHS 332
Query: 243 SE 248
++
Sbjct: 333 NQ 334
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 29.9 bits (64), Expect = 0.70
Identities = 12/62 (19%), Positives = 26/62 (41%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQFKACAVNR 242
V L GH ++C W A +V+ + W + G+ V + ++ C+ +
Sbjct: 271 VMRLTGHRAPVSCCEWLAGGQQMVTASWDRTANVWDVEKGEVVNILSGHESELNHCSTHS 330
Query: 243 SE 248
++
Sbjct: 331 NQ 332
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 29.5 bits (63), Expect = 0.93
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 66 YNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
Y L GHNG++T L + L S G + W M+
Sbjct: 241 YELNGHNGKVTTLCAAPAAKRLFSADEHGKLMCWDMN 277
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
V L H IT L W N L S ++ + W + G+
Sbjct: 197 VSKLSAHTNAITSLTWDGNKKVLYSGSSDHLIIMWDIGGGR 237
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 29.5 bits (63), Expect = 0.93
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +3
Query: 54 FQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVIL 206
+Q+++ L H+ +T L W +VSC + + W+ E++L
Sbjct: 48 WQSIHTLSEHDLPVTGLDWGTKTNRIVSCSQDKNAFVWTFDKNVWKPELVL 98
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/84 (17%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 9 AAVNGQV-IQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
A+ +G + I++++ + + GH+ + + ++ ND L+S + G + W++ +
Sbjct: 539 ASCSGDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLISADSAGIIKIWTIKTAD 598
Query: 186 RVGEVILKTNQFKACAVNRSEYEY 257
+ T++ + + N +E E+
Sbjct: 599 CECSIDAHTDKIWSLSKNHNESEF 622
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
K H + ++W+ ++ +VS G +G + WS+ + Q
Sbjct: 319 KAHESDVNVISWNRHENLIVSGGDDGELKIWSLKTIQ 355
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
+A + I+V+S + + V L GH I CL + +VS ++ + W + SG
Sbjct: 360 SASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR--LVVSGSSDNTIRLWDIHSG 415
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSG 182
+A + I+V+S + + V L GH I CL + +VS ++ + W + SG
Sbjct: 360 SASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR--LVVSGSSDNTIRLWDIHSG 415
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQ 218
K H C+A+S + ++SCG E ++ ++++ + + VG +I +T +
Sbjct: 137 KPHRLSPLCVAFSPDAKYVISCGKESSIVKFNVGTRKVVG-IIKRTKK 183
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
+ Q+++ S +++ +L GH G I L + L S + +V W +
Sbjct: 229 LFQIWNFDSLEHIKDLSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWDI 277
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 75 KGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVILKTNQ 218
K H C+A+S + ++SCG E ++ ++++ + + VG +I +T +
Sbjct: 137 KPHRLSPLCVAFSPDAKYVISCGKESSIVKFNVGTRKVVG-IIKRTKK 183
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 27 VIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSM 173
+ Q+++ S +++ +L GH G I L + L S + +V W +
Sbjct: 229 LFQIWNFDSLEHIKDLSGHRGPIFSLTFQLKTNNLYSASQDRSVKMWDI 277
>Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein.
Length = 732
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTE 149
G NG I C WS + L V C T+
Sbjct: 602 GGNGPIHCRLWSCSSLLTVDCFTD 625
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWS 170
LKGH + +AWS N S G + V W+
Sbjct: 56 LKGHKDLVYTVAWSHNGELFASGGADKLVILWN 88
>Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTE 149
G NG I C WS + L V C T+
Sbjct: 602 GGNGPIHCRLWSCSSLLTVDCFTD 625
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWS 170
LKGH + +AWS N S G + V W+
Sbjct: 56 LKGHKDLVYTVAWSHNGELFASGGADKLVILWN 88
>AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 78 GHNGRITCLAWSANDLTLVSCGTE 149
G NG I C WS + L V C T+
Sbjct: 602 GGNGPIHCRLWSCSSLLTVDCFTD 625
>AC025727-6|AAY55898.1| 558|Caenorhabditis elegans Hypothetical
protein Y73E7A.9 protein.
Length = 558
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 51 SFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQRVGEVI 203
S ++ + L+GH+G + L W+ L S + V W SG+ + ++
Sbjct: 30 SLESFHMLEGHSGCVNTLRWNKTGALLASGSDDRNVKIW--KSGREIHNLV 78
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
LKGH I ++WS N ++S G + V W +S +
Sbjct: 713 LKGHTADILDVSWSKN-YFILSSGMDRTVKLWHLSRNE 749
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 12 AVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS-GQR 188
A++ I+++ + + H G I +AWSA+ + S G + ++ +S QR
Sbjct: 697 ALSNSTIELWDVANAKLYSRFVNHTGGILGIAWSADGRRIASVGKDATLFVHEPASREQR 756
Query: 189 VGE 197
V E
Sbjct: 757 VYE 759
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 243 SEYEYSHVKINFKHKF*GSYNNFYLLK 323
S+Y YS+ + N KF G+Y F L K
Sbjct: 310 SDYSYSNSQTNIPQKFVGNYTIFVLDK 336
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSA-NDLTLVSCGTEGAVYEWSMSSGQRVGE 197
+++ + H I + WS N+ L S GT+ ++ W +S ++GE
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS---KIGE 344
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSSGQ 185
LKGH I ++WS N ++S G + V W +S +
Sbjct: 713 LKGHTADILDVSWSKN-YFILSSGMDRTVKLWHLSRNE 749
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 12 AVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS-GQR 188
A++ I+++ + + H G I +AWSA+ + S G + ++ +S QR
Sbjct: 697 ALSNSTIELWDVANAKLYSRFVNHTGGILGIAWSADGRRIASVGKDATLFVHEPASREQR 756
Query: 189 VGE 197
V E
Sbjct: 757 VYE 759
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSA-NDLTLVSCGTEGAVYEWSMSSGQRVGE 197
+++ + H I + WS N+ L S GT+ ++ W +S ++GE
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS---KIGE 344
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 12 AVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMSS-GQR 188
A++ I+++ + + H G I +AWSA+ + S G + ++ +S QR
Sbjct: 697 ALSNSTIELWDVANAKLYSRFVNHTGGILGIAWSADGRRIASVGKDATLFVHEPASREQR 756
Query: 189 VGE 197
V E
Sbjct: 757 VYE 759
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSA-NDLTLVSCGTEGAVYEWSMSSGQRVGE 197
+++ + H I + WS N+ L S GT+ ++ W +S ++GE
Sbjct: 302 LHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLS---KIGE 344
>AF045642-7|AAC02583.1| 592|Caenorhabditis elegans Hypothetical
protein C17H12.4 protein.
Length = 592
Score = 26.6 bits (56), Expect = 6.5
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -2
Query: 390 KLNKFN*IHISTFIL*TLFINGFLVNKNCC 301
K ++++ + IS ++ T+F+ G+L + CC
Sbjct: 537 KYHQYSYMTISILLIFTIFLTGYLFGRCCC 566
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +3
Query: 9 AAVNGQVIQVFSSVSFQNVYNLKGHNGRITCLAWSANDLTLVSCGTEGAVYEWSMS 176
+A + Q +++++ S ++ L GHN + C + + + S + V W +S
Sbjct: 112 SASDDQTVRIWNWQSRNSIAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDIS 167
>Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical
protein F38A6.2 protein.
Length = 891
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 72 LKGHNGRITCLAWSANDLTLVSCG-TEGAVYEWSM 173
L GH I +A+S N + L SC T+ +V+EW +
Sbjct: 857 LLGHGRIIKSVAFS-NKIQLFSCSPTDNSVFEWCL 890
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAV 158
VY +GH G + CL S L + G +G +
Sbjct: 406 VYTFRGHKGPVLCLVLSPTGDHLYTGGIDGNI 437
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 63 VYNLKGHNGRITCLAWSANDLTLVSCGTEGAV 158
VY +GH G + CL S L + G +G +
Sbjct: 406 VYTFRGHKGPVLCLVLSPTGDHLYTGGIDGNI 437
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 317 TKNPLINSVYKINVLMWIQ 373
T++P +N VYK+N L W+Q
Sbjct: 643 TESPKVN-VYKVNALEWLQ 660
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 69 NLKGHNGRITCLAWSAN-DLTLVSCGTEGAVYEWSMSSGQRVG 194
+LKGH +T + ++ DLT SC + W +G+R+G
Sbjct: 5 SLKGHERALTRVRFNREGDLTF-SCAKDKKPCVWYTENGERIG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,719,857
Number of Sequences: 27780
Number of extensions: 162292
Number of successful extensions: 556
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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