Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28c14
         (395 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03901-1|AAA20451.1|  117|Homo sapiens Ig light chain VL1 region...    30   2.4  
U03900-1|AAA20450.1|  117|Homo sapiens Ig light chain VL1 region...    30   2.4  
U03898-1|AAA20448.2|  142|Homo sapiens rheumatoid factor C2 IgG ...    30   2.4  
L22588-1|AAA59018.1|  142|Homo sapiens immunoglobulin light chai...    30   2.4  
M88282-1|AAA36662.1|  569|Homo sapiens tactile protein protein.        29   7.4  
BC020749-1|AAH20749.1|  402|Homo sapiens CD96 protein protein.         29   7.4  
M99594-1|AAA59010.1|  130|Homo sapiens immunoglobulin lambda-cha...    28   9.7  

>U03901-1|AAA20451.1|  117|Homo sapiens Ig light chain VL1 region
           protein.
          Length = 117

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 106 WLVLKLTTFFIVHCLASGARTLYDQPPSPS-SPRER 2
           W  L LT   I HC  S A+++  QPPS S +PR+R
Sbjct: 3   WSPLFLT--LITHCAGSWAQSVLTQPPSVSEAPRQR 36


>U03900-1|AAA20450.1|  117|Homo sapiens Ig light chain VL1 region
           protein.
          Length = 117

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 106 WLVLKLTTFFIVHCLASGARTLYDQPPSPS-SPRER 2
           W  L LT   I HC  S A+++  QPPS S +PR+R
Sbjct: 3   WSPLFLT--LITHCAGSWAQSVLTQPPSVSEAPRQR 36


>U03898-1|AAA20448.2|  142|Homo sapiens rheumatoid factor C2 IgG
           light chain VL1 region protein.
          Length = 142

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 106 WLVLKLTTFFIVHCLASGARTLYDQPPSPS-SPRER 2
           W  L LT   I HC  S A+++  QPPS S +PR+R
Sbjct: 3   WSPLFLT--LITHCAGSWAQSVLTQPPSVSGAPRQR 36


>L22588-1|AAA59018.1|  142|Homo sapiens immunoglobulin light chain
           protein.
          Length = 142

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 106 WLVLKLTTFFIVHCLASGARTLYDQPPSPS-SPRER 2
           W  L LT   I HC  S A+++  QPPS S +PR+R
Sbjct: 3   WSPLFLT--LITHCAGSWAQSVLTQPPSVSGAPRQR 36


>M88282-1|AAA36662.1|  569|Homo sapiens tactile protein protein.
          Length = 569

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 104 PPKKSKFTIHYVKRTALCSTSGIYKCRLV 190
           P   SK+T+H   R   CS SG Y+C LV
Sbjct: 95  PENGSKWTLHL--RNMSCSVSGRYECMLV 121


>BC020749-1|AAH20749.1|  402|Homo sapiens CD96 protein protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +2

Query: 104 PPKKSKFTIHYVKRTALCSTSGIYKCRLV 190
           P   SK+T+H   R   CS SG Y+C LV
Sbjct: 95  PENGSKWTLHL--RNMSCSVSGRYECMLV 121


>M99594-1|AAA59010.1|  130|Homo sapiens immunoglobulin lambda-chain
           protein.
          Length = 130

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 106 WLVLKLTTFFIVHCLASGARTLYDQPPSPSS 14
           W  L LT   ++HC  S A+++  QPPS S+
Sbjct: 3   WTPLLLT--LLIHCTGSRAQSVLTQPPSVSA 31


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,195,533
Number of Sequences: 237096
Number of extensions: 1184542
Number of successful extensions: 6574
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6571
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)