Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28c11
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   5.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    21   9.7  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -3

Query: 683 LYYLFLAKYTLLYYMAL*YSV 621
           LYYL L    +LY + L Y+V
Sbjct: 99  LYYLLLFVINVLYVLTLCYAV 119


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 482 NTPTNSQNNYHLP 444
           N P N Q+N++LP
Sbjct: 229 NNPKNKQHNFNLP 241


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = -2

Query: 240 GVSAQRGGASCYSGSAISLVGTPQAPELSHQLSVP 136
           G  A  G     S    + +G+P +  + H+++ P
Sbjct: 60  GGMAMNGNGMTSSSMGYTTIGSPISNRIRHEMATP 94


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -1

Query: 448  YPQNLPDCIEHKPLPSRAR 392
            +P+N+  C++H   P   R
Sbjct: 962  WPENVEGCMQHTAAPPTKR 980


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 440 LWVDDSYFVN 469
           +WV D++FVN
Sbjct: 122 IWVPDTFFVN 131


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,719
Number of Sequences: 336
Number of extensions: 2894
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)