Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28c07
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    25   2.7  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    24   3.6  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.8  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.8  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 129 ARSSIGKRDVASNLALTFFHQMLQFQFHWLHITY 28
           +RS IGKR     + +     + QF+F W +  Y
Sbjct: 459 SRSCIGKRLAMMEMEVILARWIRQFEFRWNYEDY 492


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 267 PSLHTVDVSHPYRDLLALYPDITKPASFKEVS 362
           P+L+   +S P R +L L  ++  P + KEV+
Sbjct: 4   PTLYYFPMSPPARAVLLLMKELELPMNLKEVN 35


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 444 KIIKEEFRIMQELGIC 491
           ++IK E R+++ELG C
Sbjct: 175 QVIKAERRVLKELGFC 190


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 641 NISKIMQSRNRVSVRFCNSVQLTIITTWS 555
           +I  + +SRNR S R+C  V L +   ++
Sbjct: 527 DIVSVARSRNRYSGRYCAVVTLDVTNAFN 555


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,323
Number of Sequences: 2352
Number of extensions: 14740
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)