Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28c04
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8MYW1 Cluster: RH04289p; n=3; melanogaster subgroup|Re... 160 2e-38
UniRef50_Q7QE37 Cluster: ENSANGP00000017418; n=2; Culicidae|Rep:... 154 2e-36
UniRef50_UPI0000D5568B Cluster: PREDICTED: similar to CG6666-PA;... 141 1e-32
UniRef50_UPI00003C0B3D Cluster: PREDICTED: similar to CG6666-PA;... 136 3e-31
UniRef50_UPI00015B4A66 Cluster: PREDICTED: similar to ENSANGP000... 128 9e-29
UniRef50_Q99643 Cluster: Succinate dehydrogenase cytochrome b560... 107 2e-22
UniRef50_UPI0000E47F7F Cluster: PREDICTED: similar to LOC496650 ... 105 7e-22
UniRef50_A7SD28 Cluster: Predicted protein; n=1; Nematostella ve... 105 1e-21
UniRef50_Q6GYC3 Cluster: Integral membrane protein CII-3; n=1; B... 98 2e-19
UniRef50_Q554F4 Cluster: Succinate dehydrogenase; n=2; Dictyoste... 98 2e-19
UniRef50_Q9VGT9 Cluster: CG6629-PA; n=1; Drosophila melanogaster... 95 2e-18
UniRef50_Q874H3 Cluster: Succinate dehydrogenase cytochrome b560... 91 3e-17
UniRef50_Q6BXB2 Cluster: Debaryomyces hansenii chromosome B of s... 89 9e-17
UniRef50_O74882 Cluster: Succinate dehydrogenase cytochrome B su... 88 1e-16
UniRef50_Q5DI44 Cluster: SJCHGC05423 protein; n=2; Schistosoma|R... 85 1e-15
UniRef50_A1WT29 Cluster: Succinate dehydrogenase, cytochrome b s... 84 3e-15
UniRef50_Q5KPA4 Cluster: Succinate dehydrogenase (Ubiquinone), p... 82 1e-14
UniRef50_P41956 Cluster: Succinate dehydrogenase cytochrome b560... 81 2e-14
UniRef50_Q6CNJ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 80 5e-14
UniRef50_P41955 Cluster: Succinate dehydrogenase cytochrome b560... 80 5e-14
UniRef50_A6R1B9 Cluster: Predicted protein; n=1; Ajellomyces cap... 79 9e-14
UniRef50_P80481 Cluster: Succinate dehydrogenase cytochrome b560... 76 6e-13
UniRef50_Q6C450 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 75 2e-12
UniRef50_Q8VPD3 Cluster: Succinate dehydrogenase subunit C; n=2;... 73 6e-12
UniRef50_A7BPM9 Cluster: Succinate dehydrogenase, cytochrome b s... 72 1e-11
UniRef50_A6YE87 Cluster: Succinate:cytochrome c oxidoreductase s... 72 1e-11
UniRef50_P33421 Cluster: Succinate dehydrogenase [ubiquinone] cy... 72 1e-11
UniRef50_Q4P7B4 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q92J99 Cluster: Succinate dehydrogenase cytochrome b556... 71 2e-11
UniRef50_A5FZP9 Cluster: Succinate dehydrogenase, cytochrome b s... 71 3e-11
UniRef50_A2QMS7 Cluster: Contig An07c0080, complete genome; n=3;... 71 3e-11
UniRef50_Q4WUU3 Cluster: Succinate dehydrogenase cytochrome b560... 70 4e-11
UniRef50_A6SNR9 Cluster: Succinate dehydrogenase cytochrome b su... 70 4e-11
UniRef50_P35721 Cluster: Succinate dehydrogenase cytochrome b560... 69 1e-10
UniRef50_Q2U3V9 Cluster: Succinate dehydrogenase; n=3; Pezizomyc... 67 3e-10
UniRef50_Q1E2L2 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_Q0BQC4 Cluster: Succinate dehydrogenase cytochrome b556... 66 7e-10
UniRef50_A4TYJ4 Cluster: Succinate dehydrogenase cytochrome b556... 66 9e-10
UniRef50_UPI0001555CD6 Cluster: PREDICTED: similar to succinate ... 64 4e-09
UniRef50_Q4T7S7 Cluster: Chromosome undetermined SCAF8004, whole... 63 5e-09
UniRef50_Q9PEF8 Cluster: Succinate dehydrogenase, membrane ancho... 63 5e-09
UniRef50_Q9G8V4 Cluster: Succinate:cytochrome c oxidoreductase s... 63 5e-09
UniRef50_Q73FV2 Cluster: Succinate dehydrogenase, cytochrome b55... 62 9e-09
UniRef50_P80478 Cluster: Succinate dehydrogenase cytochrome b560... 62 9e-09
UniRef50_Q04487 Cluster: Putative succinate dehydrogenase [ubiqu... 62 1e-08
UniRef50_Q2RV42 Cluster: Succinate dehydrogenase, cytochrome b s... 62 1e-08
UniRef50_Q8VS00 Cluster: Succinate dehydrogenase subunit C; n=7;... 61 2e-08
UniRef50_P48934 Cluster: Succinate dehydrogenase cytochrome b560... 61 3e-08
UniRef50_Q608E4 Cluster: Putative succinate dehydrogenase, cytoc... 60 3e-08
UniRef50_Q5PBE4 Cluster: Succinate dehydrogenase cytochrome b556... 60 5e-08
UniRef50_Q0UAQ7 Cluster: Putative uncharacterized protein; n=1; ... 60 5e-08
UniRef50_A1DJB4 Cluster: Cytochrome b subunit of succinate dehyd... 60 5e-08
UniRef50_A7TDY9 Cluster: Putative uncharacterized protein; n=1; ... 59 8e-08
UniRef50_A5CEW2 Cluster: Succinate dehydrogenase, cytochrome b55... 58 2e-07
UniRef50_Q98EF6 Cluster: Succinate dehydrogenase membrane anchor... 58 2e-07
UniRef50_Q0FFA5 Cluster: Succinate dehydrogenase, cytochrome b55... 58 2e-07
UniRef50_A3VBV7 Cluster: Succinate dehydrogenase cytochrome b-55... 57 3e-07
UniRef50_A3UHW9 Cluster: Succinate dehydrogenase, cytochrome b55... 56 7e-07
UniRef50_UPI000023F3BC Cluster: hypothetical protein FG01981.1; ... 56 1e-06
UniRef50_A3JD92 Cluster: Succinate dehydrogenase/fumarate reduct... 56 1e-06
UniRef50_Q0BX77 Cluster: Succinate dehydrogenase, cytochrome b55... 55 1e-06
UniRef50_Q952R1 Cluster: Succinate dehydrogenase subunit 3; n=6;... 55 1e-06
UniRef50_P48935 Cluster: Succinate dehydrogenase cytochrome b560... 54 2e-06
UniRef50_Q016R6 Cluster: Chromosome 06 contig 1, DNA sequence; n... 54 3e-06
UniRef50_A3VQE8 Cluster: Succinate dehydrogenase cytochrome B-55... 52 9e-06
UniRef50_Q2GEZ8 Cluster: Succinate dehydrogenase, cytochrome b55... 52 2e-05
UniRef50_Q0CIZ1 Cluster: Predicted protein; n=1; Aspergillus ter... 52 2e-05
UniRef50_Q57AZ2 Cluster: SdhC, succinate dehydrogenase, cytochro... 50 4e-05
UniRef50_Q7S1S2 Cluster: Putative uncharacterized protein NCU077... 50 4e-05
UniRef50_Q6ND90 Cluster: Succinate dehydrogenase membrane anchor... 50 5e-05
UniRef50_Q6G1S1 Cluster: Succinate dehydrogenase cytochrome b560... 50 5e-05
UniRef50_Q59659 Cluster: Succinate dehydrogenase cytochrome b556... 49 1e-04
UniRef50_Q3C2D8 Cluster: Succinate dehydrogenase complex, subuni... 47 3e-04
UniRef50_A7HT20 Cluster: Succinate dehydrogenase cytochrome b556... 46 8e-04
UniRef50_Q8W9Q8 Cluster: Succinate:cytochrome c oxidoreductase s... 46 8e-04
UniRef50_A0Y6Y3 Cluster: Putative succinate dehydrogenase, hydro... 44 0.003
UniRef50_Q9ZZR3 Cluster: Succinate dehydrogenase cytochrome B560... 44 0.004
UniRef50_Q4FP23 Cluster: Succinate dehydrogenase cytochrome b; n... 43 0.006
UniRef50_Q94FP3 Cluster: Succinate dehydrogenase subunit 3; n=1;... 43 0.006
UniRef50_P63725 Cluster: Succinate dehydrogenase cytochrome b556... 41 0.030
UniRef50_Q9A2M8 Cluster: Succinate dehydrogenase, cytochrome b55... 40 0.069
UniRef50_A6EWE3 Cluster: Succinate dehydrogenase; n=1; Marinobac... 39 0.091
UniRef50_A3K3K3 Cluster: Succinate dehydrogenase, cytochrome b55... 39 0.091
UniRef50_Q9FXX8 Cluster: Arabidopsis thaliana genomic DNA, chrom... 39 0.091
UniRef50_Q94FP2 Cluster: Succinate dehydrogenase subunit 3; n=6;... 38 0.16
UniRef50_A4EZ53 Cluster: Succinate dehydrogenase cytochrome b-55... 38 0.21
UniRef50_Q1N6I2 Cluster: Succinate dehydrogenase, cytochrome b55... 37 0.48
UniRef50_A1SWY2 Cluster: Succinate dehydrogenase, cytochrome b s... 37 0.48
UniRef50_Q7XYC5 Cluster: Succinate dehydrogenase subunit 3; n=1;... 37 0.48
UniRef50_A4A3L0 Cluster: Succinate dehydrogenase cytochrome b-55... 36 0.84
UniRef50_Q5DC80 Cluster: SJCHGC03139 protein; n=1; Schistosoma j... 36 0.84
UniRef50_Q5QU28 Cluster: Succinate dehydrogenase/fumarate reduct... 36 1.1
UniRef50_Q3J8C0 Cluster: Succinate dehydrogenase, cytochrome b s... 36 1.1
UniRef50_Q31E02 Cluster: Succinate dehydrogenase, cytochrome b s... 36 1.1
UniRef50_Q1GNN8 Cluster: Succinate dehydrogenase, cytochrome b s... 35 1.5
UniRef50_A0Q8D2 Cluster: Succinate dehydrogenase, cytochrome b55... 35 1.5
UniRef50_A0YD91 Cluster: Succinate dehydrogenase; n=5; Gammaprot... 35 2.0
UniRef50_UPI0000DAE349 Cluster: hypothetical protein Rgryl_01000... 34 2.6
UniRef50_Q7VR95 Cluster: Succinate dehydrogenase cytochrome b-55... 34 2.6
UniRef50_A6GWN2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_P51055 Cluster: Succinate dehydrogenase cytochrome b556... 34 2.6
UniRef50_Q9LPW9 Cluster: F13K23.5 protein; n=3; Arabidopsis thal... 34 3.4
UniRef50_UPI0000F1ED4F Cluster: PREDICTED: similar to pol polypr... 33 7.9
>UniRef50_Q8MYW1 Cluster: RH04289p; n=3; melanogaster subgroup|Rep:
RH04289p - Drosophila melanogaster (Fruit fly)
Length = 171
Score = 160 bits (389), Expect = 2e-38
Identities = 83/152 (54%), Positives = 98/152 (64%)
Frame = +1
Query: 115 ASLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEEHHDVRNAKLNRPLSPHLTIYSFQL 294
+SL R PA + A A+ E K+E +N +L R LSPHLTIY QL
Sbjct: 6 SSLIRSPALRQGLQMAAASRQVSMKVVSVAETQKDESFFEKNERLGRELSPHLTIYQPQL 65
Query: 295 TAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKVIIAAP 474
T++LSI HR TG+ L LG+GAL+S +DISHY+TM+EGL LS ATL K IIA P
Sbjct: 66 TSMLSICHRGTGLALGVGVWGLGLGALISSHDISHYVTMVEGLQLSGATLTALKFIIAYP 125
Query: 475 LGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
GYH ANGIRHL WDT + L IKEVYSTGYAM
Sbjct: 126 AGYHTANGIRHLLWDTGRFLKIKEVYSTGYAM 157
>UniRef50_Q7QE37 Cluster: ENSANGP00000017418; n=2; Culicidae|Rep:
ENSANGP00000017418 - Anopheles gambiae str. PEST
Length = 175
Score = 154 bits (373), Expect = 2e-36
Identities = 72/117 (61%), Positives = 87/117 (74%)
Frame = +1
Query: 220 EHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISH 399
E HD RNA+L RP SPHLTIYSFQLT++LSITHR TG+ LT Y +ALG+GAL +D +H
Sbjct: 47 ESHDDRNARLKRPQSPHLTIYSFQLTSMLSITHRFTGLALTGYITALGLGALAMPHDATH 106
Query: 400 YITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
Y+TM+EG LS TL K +A P YH NG+RHL+WD K L+IKEVY+TGY M
Sbjct: 107 YLTMLEG--LSAPTLIALKFTMAYPFAYHTVNGVRHLFWDMGKFLTIKEVYTTGYTM 161
>UniRef50_UPI0000D5568B Cluster: PREDICTED: similar to CG6666-PA;
n=2; Tribolium castaneum|Rep: PREDICTED: similar to
CG6666-PA - Tribolium castaneum
Length = 173
Score = 141 bits (342), Expect = 1e-32
Identities = 76/163 (46%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Frame = +1
Query: 91 RLGSRSVLASLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEE---HHDVRNAKLNRPL 261
RLG+R +L+ L +L ++ + + +K +P +E HD RN +L RP
Sbjct: 6 RLGNRQILSQLRN--EKLGMLSLVRPVT-------LKAQPATKEIDIGHDERNMQLGRPQ 56
Query: 262 SPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPAT 441
SPHLTIYSFQLT++LSITHRATGMML YA G GA+V + I HY+ ++ ++
Sbjct: 57 SPHLTIYSFQLTSMLSITHRATGMMLAGYAIMWGTGAVVLPDTIPHYLDALQQAHVGGFV 116
Query: 442 LFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
L + K ++A P+ YHF NGIRHL WD + L+IKEVY+TGYAM
Sbjct: 117 LSMGKFMLAFPMCYHFWNGIRHLAWDLGRFLTIKEVYATGYAM 159
>UniRef50_UPI00003C0B3D Cluster: PREDICTED: similar to CG6666-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG6666-PA
- Apis mellifera
Length = 174
Score = 136 bits (330), Expect = 3e-31
Identities = 66/117 (56%), Positives = 79/117 (67%)
Frame = +1
Query: 220 EHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISH 399
E HD +N +L RPLSPHLTIY QLTA LSITHR TGM+L++YA GIG L+ I
Sbjct: 44 ETHDEKNLRLKRPLSPHLTIYQIQLTAFLSITHRTTGMILSSYAMLFGIGTLLIPGGIPC 103
Query: 400 YITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
I +I L LS LF+ K ++A P YH NG+RHL WD L+IKEVYSTGYA+
Sbjct: 104 LIEIISELGLSAPVLFVGKTLLALPATYHTFNGLRHLAWDLGMFLTIKEVYSTGYAV 160
>UniRef50_UPI00015B4A66 Cluster: PREDICTED: similar to
ENSANGP00000017418; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000017418 - Nasonia
vitripennis
Length = 175
Score = 128 bits (310), Expect = 9e-29
Identities = 58/117 (49%), Positives = 77/117 (65%)
Frame = +1
Query: 220 EHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISH 399
E HD +N +L RPLSPHLTIY QLT++LS+THR TG++L++YA LG+G L +
Sbjct: 45 ETHDEKNMRLKRPLSPHLTIYQLQLTSMLSVTHRGTGIVLSSYAMILGLGTLFVPGGVPC 104
Query: 400 YITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
+ I L A L+L K + PL YH+ NGIRHL WD K L+IK+VY TG+ +
Sbjct: 105 MVQAIAAWGLPSAVLYLGKAMFVYPLTYHYLNGIRHLAWDLGKFLTIKDVYKTGWTV 161
>UniRef50_Q99643 Cluster: Succinate dehydrogenase cytochrome b560
subunit, mitochondrial precursor; n=36;
Euteleostomi|Rep: Succinate dehydrogenase cytochrome
b560 subunit, mitochondrial precursor - Homo sapiens
(Human)
Length = 169
Score = 107 bits (257), Expect = 2e-22
Identities = 49/109 (44%), Positives = 67/109 (61%)
Frame = +1
Query: 235 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 414
+N NRPLSPH+TIYS+ L +SI HR TG+ L+ S G+ AL+ + Y+ ++
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALSAGVSLFGMSALLLPGNFESYLELV 103
Query: 415 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
+ L L PA + AK + PL YH NGIRHL WD KGL I ++Y +G
Sbjct: 104 KSLCLGPALIHTAKFALVFPLMYHTWNGIRHLMWDLGKGLKIPQLYQSG 152
>UniRef50_UPI0000E47F7F Cluster: PREDICTED: similar to LOC496650
protein, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to LOC496650 protein,
partial - Strongylocentrotus purpuratus
Length = 116
Score = 105 bits (253), Expect = 7e-22
Identities = 48/91 (52%), Positives = 65/91 (71%)
Frame = +1
Query: 238 NAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIE 417
N +LNRP+SPHLTIYS Q+T++LSITHR TG+ LT ALG+ V +D +HY+ MI+
Sbjct: 26 NKRLNRPMSPHLTIYSPQVTSMLSITHRGTGVGLTVGIYALGLSMSVLPHDFAHYLEMIK 85
Query: 418 GLNLSPATLFLAKVIIAAPLGYHFANGIRHL 510
L+ P+ LFL K+ I P+ +H NG+RHL
Sbjct: 86 ALSFGPSLLFLTKMAIVWPVAFHSLNGVRHL 116
>UniRef50_A7SD28 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 169
Score = 105 bits (251), Expect = 1e-21
Identities = 47/116 (40%), Positives = 70/116 (60%)
Frame = +1
Query: 214 KEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDI 393
K+E +N +L RP+SP L Y F+ A+LS +HR TG+++TT + + AL +
Sbjct: 36 KKEDFFKKNERLKRPMSPFLLTYKFEFPALLSGSHRVTGVIMTTGTTIFALCALGLPEGL 95
Query: 394 SHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
HY+ +I+G L +F K ++A P+ YH NG+RHL+WD KG IK +Y TG
Sbjct: 96 EHYVNVIKGWELPRPFIFTCKTLLAWPVCYHGLNGLRHLFWDIGKGFEIKTLYKTG 151
>UniRef50_Q6GYC3 Cluster: Integral membrane protein CII-3; n=1;
Branchiostoma belcheri tsingtauense|Rep: Integral
membrane protein CII-3 - Branchiostoma belcheri
tsingtauense
Length = 165
Score = 97.9 bits (233), Expect = 2e-19
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Frame = +1
Query: 235 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQN----DISHY 402
+NA+ RP+SPHLTIY QLTA+LS+THR TG + A +G LV D
Sbjct: 51 KNAQKKRPMSPHLTIYKPQLTAMLSMTHRGTGAAMAGCVYAFSMGMLVVNPLLGWDFPTI 110
Query: 403 ITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
I+ ++ L L P + K +A P+ YH NGIRHL WDT G +K +YS+G+
Sbjct: 111 ISFVKSLELHPWLILGGKWCMAWPISYHAMNGIRHLTWDTGYGFDMKVLYSSGW 164
>UniRef50_Q554F4 Cluster: Succinate dehydrogenase; n=2;
Dictyostelium discoideum|Rep: Succinate dehydrogenase -
Dictyostelium discoideum AX4
Length = 192
Score = 97.9 bits (233), Expect = 2e-19
Identities = 49/104 (47%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
+P SPHLTIY F L AV+SI HRATG+ L + L L + +D HYI ++
Sbjct: 71 QPTSPHLTIYKFPLPAVMSIMHRATGICLALGITGLAGVTLFAPHDAIHYIQLLH--TQY 128
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWD-TAKGLSIKEVYSTG 561
PA ++ AK +A PL YHF G+RH+ WD T KGLSI ++ S+G
Sbjct: 129 PALVYPAKFAVALPLTYHFCTGVRHIIWDETVKGLSISQIESSG 172
>UniRef50_Q9VGT9 Cluster: CG6629-PA; n=1; Drosophila
melanogaster|Rep: CG6629-PA - Drosophila melanogaster
(Fruit fly)
Length = 261
Score = 94.7 bits (225), Expect = 2e-18
Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +1
Query: 181 PKITF--VKFEPPKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYAS 354
P +T + F P + +D RN L R LSPHL+IY QLT+ LS R +G +L +
Sbjct: 58 PPVTLKVIPFRMPPDLPYDDRNMLLGRQLSPHLSIYKIQLTSTLSAFLRISGFVLAVFVW 117
Query: 355 ALGIGALVSQNDISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGL 534
+GI L Q D+ +I +E + + +AKV++ P YH G RHL W K L
Sbjct: 118 FVGISGLCLQGDMEGFIKKVEKCDCH-GMVTMAKVMVTMPFAYHTVAGTRHLIWYLNKFL 176
Query: 535 SIKEVYSTGY 564
+I E+Y+TGY
Sbjct: 177 TIPEIYATGY 186
>UniRef50_Q874H3 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=2; Coprinopsis cinerea|Rep: Succinate
dehydrogenase cytochrome b560 subunit - Coprinus
cinereus (Inky cap fungus) (Hormographiella
aspergillata)
Length = 179
Score = 90.6 bits (215), Expect = 3e-17
Identities = 49/122 (40%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Frame = +1
Query: 211 PKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQN- 387
P E + +L RP SPH TIY QLT + SI R TG L+ I L++
Sbjct: 45 PAENLQLLNKQRLKRPSSPHFTIYQPQLTWLGSIAKRVTGAGLSVLLYGFSIAYLIAPGT 104
Query: 388 -DISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
D +H + + GL + K I+AAP YH NG+RHL WD K LS+K Y+TGY
Sbjct: 105 FDSAHVVEFVAGL--PDGVKYAGKAILAAPFSYHAWNGLRHLAWDAGKFLSVKGAYATGY 162
Query: 565 AM 570
A+
Sbjct: 163 AV 164
>UniRef50_Q6BXB2 Cluster: Debaryomyces hansenii chromosome B of
strain CBS767 of Debaryomyces hansenii; n=4;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
B of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 164
Score = 89.0 bits (211), Expect = 9e-17
Identities = 57/146 (39%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Frame = +1
Query: 142 LNSVNYAQAASNAPKITFVKFEPPKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHR 321
+N+ +A I+ VK +E+ V K NRP SPHLTIY QLT V+S HR
Sbjct: 6 VNTSRFATRYGGMRSISTVKASHEQEQEVLVAQRK-NRPTSPHLTIYQLQLTMVMSGLHR 64
Query: 322 ATGMMLTTYASALGIG-ALVSQNDISHYITMIEGL--NLSPATLFLAKVIIAAPLGYHFA 492
TG+ + + AL G A S I + G L A AK +A P YH
Sbjct: 65 VTGVFMASGFYALTCGYAAASILSIPFDAATLVGAFAGLPVAVKLAAKAAMAYPFVYHAF 124
Query: 493 NGIRHLYWDTAKGLSIKEVYSTGYAM 570
NG+RH+ WD K L+IK VY TGY +
Sbjct: 125 NGVRHIIWDFGKELTIKGVYRTGYVV 150
>UniRef50_O74882 Cluster: Succinate dehydrogenase cytochrome B
subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Succinate dehydrogenase
cytochrome B subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 180
Score = 88.2 bits (209), Expect = 1e-16
Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Frame = +1
Query: 217 EEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQ-NDI 393
E + + + +++RP SPHLTIY QLT LS HR TG ++ A +G LV+
Sbjct: 46 EANSRLASQRVHRPNSPHLTIYEPQLTWYLSSLHRITGCVVAGTLYAFAMGYLVAPLAGY 105
Query: 394 SHYITMIEGLNLSPATLFL--AKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYA 567
S I GL T AK +I+ PL +H NGIRHL WDT K LS+K VY TGYA
Sbjct: 106 SLDTATISGLIQQVPTWIKVPAKFVISYPLTFHIFNGIRHLIWDTTKELSLKGVYRTGYA 165
Query: 568 M 570
+
Sbjct: 166 V 166
>UniRef50_Q5DI44 Cluster: SJCHGC05423 protein; n=2; Schistosoma|Rep:
SJCHGC05423 protein - Schistosoma japonicum (Blood
fluke)
Length = 192
Score = 85.0 bits (201), Expect = 1e-15
Identities = 41/110 (37%), Positives = 57/110 (51%)
Frame = +1
Query: 235 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 414
+N RP SPHL IYS L S HRATG+ + S++GIGA + +
Sbjct: 65 KNITGGRPWSPHLQIYSAPLVMRFSFLHRATGIAMAIVWSSVGIGAFFFTGHYDSVLDYV 124
Query: 415 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
+ ++L + K ++ PL YH+ NG+RHL WD A G IK TG+
Sbjct: 125 KNMHLGDTVITACKFVLCYPLVYHYLNGMRHLAWDYAIGFPIKTCNKTGF 174
>UniRef50_A1WT29 Cluster: Succinate dehydrogenase, cytochrome b
subunit precursor; n=1; Halorhodospira halophila
SL1|Rep: Succinate dehydrogenase, cytochrome b subunit
precursor - Halorhodospira halophila (strain DSM 244 /
SL1) (Ectothiorhodospirahalophila (strain DSM 244 /
SL1))
Length = 129
Score = 83.8 bits (198), Expect = 3e-15
Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASAL--GIGALVSQNDISHYITMIEGL 423
NRPLSPHLTIY QLT++LS+ HR TG+ +T A L + AL + + +T + G
Sbjct: 5 NRPLSPHLTIYRPQLTSLLSVLHRGTGVFVTMAAVLLVAWVMALAAGPEYYELLTQVLGH 64
Query: 424 NLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
L L + I L YH NGIRHL WDT + +K VY GY
Sbjct: 65 WLGQLVL----LGITFSLAYHLCNGIRHLVWDTVRAFELKAVYRGGY 107
>UniRef50_Q5KPA4 Cluster: Succinate dehydrogenase (Ubiquinone),
putative; n=1; Filobasidiella neoformans|Rep: Succinate
dehydrogenase (Ubiquinone), putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 221
Score = 82.2 bits (194), Expect = 1e-14
Identities = 51/118 (43%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Frame = +1
Query: 232 VRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMML--TTYASALG--IGALVSQNDISH 399
+ + + +RP SPHL IY QLT LS HR TG+ Y SA+ + LV D +H
Sbjct: 92 LNSQRQHRPTSPHLAIYQPQLTWYLSSLHRITGVAFGGALYLSAMAYLLHPLVPVIDSAH 151
Query: 400 YITMIEGLNLSPATLF-LAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
I ++ L P AK IIA P +H NG+RHL WD K L+IK VY TGYA+
Sbjct: 152 LIQLVHDL---PGWFKGSAKFIIALPFTFHCYNGLRHLNWDIGKALTIKGVYRTGYAV 206
>UniRef50_P41956 Cluster: Succinate dehydrogenase cytochrome b560
subunit, mitochondrial precursor; n=2; Chromadorea|Rep:
Succinate dehydrogenase cytochrome b560 subunit,
mitochondrial precursor - Caenorhabditis elegans
Length = 182
Score = 81.0 bits (191), Expect = 2e-14
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
NRP++PHLT+Y QLT +LS HR +G ++ GIG V D + ++ I NL
Sbjct: 51 NRPIAPHLTVYQPQLTWMLSGFHRISGCVMAGTLLVGGIGFAVLPFDFTAFVDFIRSWNL 110
Query: 430 SPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGL-SIKEVYSTGY 564
A + K IIA P+ +H NGIR L +D AKG+ ++ ++Y +GY
Sbjct: 111 PCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGVNNVGQIYKSGY 156
>UniRef50_Q6CNJ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 181
Score = 79.8 bits (188), Expect = 5e-14
Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Frame = +1
Query: 214 KEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMML--TTYAS--ALGIGALVS 381
+EE+ + + + RP+SPHLTIY QLT LS HR +G+ L YA A G+ +
Sbjct: 45 QEEYELLVSQRKVRPVSPHLTIYQPQLTWYLSSVHRVSGVFLGLAFYAVTIAFGVSTVFG 104
Query: 382 QNDISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
+ + + AK A +HF NGIRHL WDT K L++K VY TG
Sbjct: 105 LGMSTENLVQFYNEKIPSWIDLTAKAGFAYLFAFHFGNGIRHLIWDTGKELTLKGVYRTG 164
Query: 562 YAM 570
YA+
Sbjct: 165 YAV 167
>UniRef50_P41955 Cluster: Succinate dehydrogenase cytochrome b560
subunit, mitochondrial precursor; n=1; Caenorhabditis
briggsae|Rep: Succinate dehydrogenase cytochrome b560
subunit, mitochondrial precursor - Caenorhabditis
briggsae
Length = 184
Score = 79.8 bits (188), Expect = 5e-14
Identities = 44/107 (41%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = +1
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLN 426
+ RP++PHLTIY QLT +LS HR +G ++ G+G V D + ++ I G N
Sbjct: 50 MKRPIAPHLTIYQPQLTWMLSGFHRISGCVMAGTLLVGGLGFAVLPLDFTTFVEYIRGWN 109
Query: 427 LSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGL-SIKEVYSTGY 564
L A + K IIA P+ +H NGIR L +D AKG+ +I +VY +G+
Sbjct: 110 LPCAVTAVFKYIIAFPIIFHTLNGIRFLGFDLAKGVDNIGQVYKSGW 156
>UniRef50_A6R1B9 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 226
Score = 79.0 bits (186), Expect = 9e-14
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Frame = +1
Query: 154 NYAQAASNAPKITFVKFEPPKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGM 333
NYA A+ P + + + +R +LNRP+SPH++IY Q+T+VLS+ HR TG+
Sbjct: 49 NYAALAAPIPIAQSARSSKLSDPNDLLRKQRLNRPVSPHISIYQPQITSVLSLLHRNTGL 108
Query: 334 MLTTYASALGIGALVSQNDISHYI---TMIEGLNLSP-ATLFLAKVIIAAPLGYHFANGI 501
+ + L A + + +I +M P A L K A P +H NG+
Sbjct: 109 LSGPF--YLFFAAYAASPWLGWHIDSTSMAASFGTLPVAAKVLLKTTAALPFTFHCINGV 166
Query: 502 RHLYWDTAKGLSIKEVYSTG 561
RHL WD +G S K+V +G
Sbjct: 167 RHLVWDLGRGFSNKQVTKSG 186
>UniRef50_P80481 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=1; Reclinomonas americana|Rep: Succinate
dehydrogenase cytochrome b560 subunit - Reclinomonas
americana
Length = 144
Score = 76.2 bits (179), Expect = 6e-13
Identities = 45/114 (39%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Frame = +1
Query: 238 NAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLT-TYASALGIGALVSQNDISH-YITM 411
N +NRP+SPHLTIY Q+T LSI HR TG +L T + I +++ + S+ + ++
Sbjct: 16 NMNINRPISPHLTIYKLQITNTLSIFHRITGGVLALTLCFFILILKMLNFHLSSYAFYSI 75
Query: 412 IEGLNLSPATLFLA-KVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
LN LF+A + + YH G+RHL WD L I+ VY TGY M
Sbjct: 76 AYTLNQYSGFLFIAISFFLLLFIFYHLFAGLRHLVWDAGYALEIENVYLTGYIM 129
>UniRef50_Q6C450 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 169
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +1
Query: 211 PKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGM--------MLTTYASALGI 366
P E + + RP SPHL IY QLT LS HR TG+ +L YA+ +
Sbjct: 33 PAEALDILNKQRALRPTSPHLDIYQPQLTWYLSGLHRVTGVALGGALYALLCAYAAGPAL 92
Query: 367 GALVSQNDISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKE 546
G + ++H + + P K ++A P +H NG+RHL WD K L++K
Sbjct: 93 GIHIDSTTLAHTFAAVPLVAKLPL-----KALVAFPFTFHAFNGVRHLVWDFTKELTVKG 147
Query: 547 VYSTGYAM 570
VY TGY +
Sbjct: 148 VYRTGYTV 155
>UniRef50_Q8VPD3 Cluster: Succinate dehydrogenase subunit C; n=2;
Anaplasma phagocytophilum|Rep: Succinate dehydrogenase
subunit C - Anaplasma phagocytophilum (Ehrlichia
phagocytophila)
Length = 127
Score = 72.9 bits (171), Expect = 6e-12
Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
+RPLSPHL++Y +TA LSITHR TG++L L L+S + S + GL
Sbjct: 4 SRPLSPHLSVYKLPITAWLSITHRITGVLL-LMGLTLFTWLLISLHWTS---GQLWGLLD 59
Query: 430 SPATLFLAKVIIA---APLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
S + L KVII A L YH+ NGIRHL+WD G E +G+ M
Sbjct: 60 SWIGVLLVKVIIGGCIAALCYHYYNGIRHLFWDCGIGFGKSEATFSGWLM 109
>UniRef50_A7BPM9 Cluster: Succinate dehydrogenase, cytochrome b
subunit; n=1; Beggiatoa sp. PS|Rep: Succinate
dehydrogenase, cytochrome b subunit - Beggiatoa sp. PS
Length = 130
Score = 72.1 bits (169), Expect = 1e-11
Identities = 44/103 (42%), Positives = 54/103 (52%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
+PLSPHL IY QLT+++SI HR TG+ L+ L + + Y + S
Sbjct: 4 QPLSPHLQIYKPQLTSIMSILHRITGVFLSLGTLVLVYWLMAAAEGPETY-QQAQNFLRS 62
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
LFL A L YH NGIRHL+WD GL IK VY TG
Sbjct: 63 WWGLFLLFGWSLA-LFYHLCNGIRHLFWDAGLGLDIKTVYITG 104
>UniRef50_A6YE87 Cluster: Succinate:cytochrome c oxidoreductase
subunit 3; n=1; Chlorokybus atmophyticus|Rep:
Succinate:cytochrome c oxidoreductase subunit 3 -
Chlorokybus atmophyticus (Soil alga)
Length = 133
Score = 72.1 bits (169), Expect = 1e-11
Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Frame = +1
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQN----DISHYITMI 414
L+RPLSPHLTIY QLT++LSI HR TG + T + L I L N + YI
Sbjct: 5 LHRPLSPHLTIYKPQLTSMLSIFHRITGAFMAT-SVLLTIFLLKICNFHLTSYNFYIFAF 63
Query: 415 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
+ + ++ L YH +NG+RHL WD L I +VYS+G
Sbjct: 64 ILFSYYKWLILTVLFLLIISLHYHMSNGLRHLTWDLGLSLDIAKVYSSG 112
>UniRef50_P33421 Cluster: Succinate dehydrogenase [ubiquinone]
cytochrome b subunit, mitochondrial precursor; n=4;
Saccharomycetales|Rep: Succinate dehydrogenase
[ubiquinone] cytochrome b subunit, mitochondrial
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 198
Score = 71.7 bits (168), Expect = 1e-11
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = +1
Query: 220 EHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRAT----GMMLTTYASALGIGALVSQN 387
E + + RP+SPHLTIY QLT LS HR + G+ + G+ L+
Sbjct: 64 EEQILNKQRAKRPISPHLTIYQPQLTWYLSSLHRISLVLMGLGFYLFTILFGVSGLLGLG 123
Query: 388 DISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYA 567
+ ++ S T + K A H+ IRHL WDTAK L++K VY TGYA
Sbjct: 124 LTTEKVSNWYHQKFSKITEWSIKGSFAYLFAIHYGGAIRHLIWDTAKELTLKGVYRTGYA 183
Query: 568 M 570
+
Sbjct: 184 L 184
>UniRef50_Q4P7B4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 193
Score = 70.9 bits (166), Expect = 2e-11
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 5/172 (2%)
Frame = +1
Query: 70 MALFSCTRLGSRSVLASLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEEHHDVRNA-K 246
+ L S + + ++ ++L+ P +++ + + AA+ K+T ++++ D+ N +
Sbjct: 21 VGLRSAPAMPTMALRSALTTSPRMVSTSSKSNAAAQTTKLT-------QQQNLDLLNQQR 73
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLT-TYAS--ALGIGALVSQNDISHYITMIE 417
RP SPH TIY Q+T +LSI +R TG L+ +YA G +S ++ ++ +
Sbjct: 74 AQRPSSPHFTIYQPQITWLLSIINRITGTGLSVSYAGYPLFGSAEALSSASLTDFVATL- 132
Query: 418 GLNLSPATLFLA-KVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
PA A K +A +H NG+RHL WD L+IK VYST Y +
Sbjct: 133 -----PAWFKTAVKAPLALAFSFHSLNGLRHLAWDWGFALTIKGVYSTAYVV 179
>UniRef50_Q92J99 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=10; Rickettsia|Rep: Succinate dehydrogenase
cytochrome b556 subunit - Rickettsia conorii
Length = 124
Score = 70.9 bits (166), Expect = 2e-11
Identities = 41/106 (38%), Positives = 60/106 (56%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RP SPHLTIY Q+++ LSI +R TG+ L S L ++S+ D ++Y+ + E +
Sbjct: 12 RPTSPHLTIYKPQISSTLSILYRMTGVALFFAVSILVWWLILSKYD-NNYLQLAECCIIK 70
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
+ V ++ YH NGIRHL+WD G SIK V TG+ +
Sbjct: 71 -----ICLVAVSYAWFYHLCNGIRHLFWDIGYGFSIKLVNITGWCV 111
>UniRef50_A5FZP9 Cluster: Succinate dehydrogenase, cytochrome b
subunit; n=3; Proteobacteria|Rep: Succinate
dehydrogenase, cytochrome b subunit - Acidiphilium
cryptum (strain JF-5)
Length = 143
Score = 70.5 bits (165), Expect = 3e-11
Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Frame = +1
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYA--SALGIGALVSQNDISHYITMIEG 420
+ RPLSPHL +Y Q+T+ LSI HR TG+ L+ A +L + A + + I G
Sbjct: 19 VRRPLSPHLQVYRPQITSTLSILHRITGVALSAGAVLLSLWLAAAATSSGAFSVAQAIVG 78
Query: 421 LNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
L LF L YHF NGIRHL WD G + V+ +G A+
Sbjct: 79 SILGMIVLF----GFTFALFYHFCNGIRHLLWDAGVGFELPSVHRSGVAV 124
>UniRef50_A2QMS7 Cluster: Contig An07c0080, complete genome; n=3;
Aspergillus|Rep: Contig An07c0080, complete genome -
Aspergillus niger
Length = 188
Score = 70.5 bits (165), Expect = 3e-11
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Frame = +1
Query: 244 KLNRPLSPHLTIYSFQLTAVLSITHRATGMMLT----TYASALGIGALVSQNDISHYITM 411
+LNRP+SPHL+IY Q+T + S HR TG+ L+ YASA ++ D+
Sbjct: 63 RLNRPVSPHLSIYRPQITWIGSSIHRITGIALSGSLYLYASAYLASPMLGW-DLGSASAA 121
Query: 412 IEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
L K +A P YH NG+RHL WDT GL+ +V +G+ +
Sbjct: 122 AAFAALPVVAKVALKTTMALPFTYHCMNGVRHLIWDTGAGLTNPQVIKSGWTV 174
>UniRef50_Q4WUU3 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=5; Eurotiomycetidae|Rep: Succinate
dehydrogenase cytochrome b560 subunit - Aspergillus
fumigatus (Sartorya fumigata)
Length = 208
Score = 70.1 bits (164), Expect = 4e-11
Identities = 43/113 (38%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +1
Query: 244 KLNRPLSPHLTIYSFQLTAVLSITHRATGMMLT----TYASALGIGALVSQNDISHYITM 411
+LNRP+SPHL+IY Q+T + S HR TG+ L+ +A+A L + S I
Sbjct: 83 RLNRPVSPHLSIYRPQITWIGSSAHRITGIALSGSLYLFATAYLAAPLFGWHLESASIAA 142
Query: 412 IEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
G L A L K A P YH NG+RHL WD +G+S ++V +G+ +
Sbjct: 143 AFGA-LPIAAKVLIKGTAAFPFVYHCLNGVRHLVWDLGRGISNQQVIKSGWTV 194
>UniRef50_A6SNR9 Cluster: Succinate dehydrogenase cytochrome b
subunit; n=2; Sclerotiniaceae|Rep: Succinate
dehydrogenase cytochrome b subunit - Botryotinia
fuckeliana B05.10
Length = 189
Score = 70.1 bits (164), Expect = 4e-11
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Frame = +1
Query: 211 PKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQND 390
PK+ ++ + + RP++PHLTIY Q+ ++S +R TG +L+ G L S
Sbjct: 52 PKDSYNILVEQRKLRPVAPHLTIYQPQIPWIMSGLNRITGCILSGGFYVFGAAYLASPLF 111
Query: 391 ISHYIT--MIEGLNLSP-ATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
H T M+ P A FLAK +A P YH NG+RHL WD K V TG
Sbjct: 112 GWHLDTASMVAAFGAWPLAAKFLAKFTLAMPFTYHSFNGLRHLAWDMGKTFKNATVVKTG 171
Query: 562 YAM 570
+ +
Sbjct: 172 WTV 174
>UniRef50_P35721 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=4; Streptophytina|Rep: Succinate
dehydrogenase cytochrome b560 subunit - Marchantia
polymorpha (Liverwort)
Length = 137
Score = 68.5 bits (160), Expect = 1e-10
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +1
Query: 244 KLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDIS--HYITMIE 417
K+NRPLSPHLTIY QLT+ SI HR +G L T + + ++ H+
Sbjct: 2 KINRPLSPHLTIYKPQLTSTFSIFHRISGAFLATMVLFSILFFKIGDLSLTFYHFYQYFF 61
Query: 418 GLNLSPATLFLAKV-IIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
L ++ V L YH +NG+RHL WD L + +VY++G M
Sbjct: 62 FLTFYLNWFIISLVNFTLLALCYHMSNGVRHLLWDLGFFLELSKVYTSGIIM 113
>UniRef50_Q2U3V9 Cluster: Succinate dehydrogenase; n=3;
Pezizomycotina|Rep: Succinate dehydrogenase -
Aspergillus oryzae
Length = 188
Score = 67.3 bits (157), Expect = 3e-10
Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Frame = +1
Query: 244 KLNRPLSPHLTIYSFQLTAVLSITHRATGMMLT----TYASALGIGALVSQNDISHYITM 411
+LNRP+SPHL+IY Q+T + S HR TG L+ YA+A L+ + S +
Sbjct: 63 RLNRPVSPHLSIYRPQITWIGSSFHRITGFALSGSLYLYATAYLASPLLGWHLESASVAA 122
Query: 412 IEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
L L K +A P YH NG+RHL WD +G++ ++V +G+ +
Sbjct: 123 AFAA-LPIVAKVLLKGFMALPFTYHCFNGVRHLVWDLGRGITNQQVIKSGWTV 174
>UniRef50_Q1E2L2 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 205
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/120 (35%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +1
Query: 211 PKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQN- 387
P++ + +LNRP+SPHL+IY FQ+T+V+S R TGMML+ G +VS
Sbjct: 68 PQDGQRILAAQRLNRPVSPHLSIYKFQITSVVSSLERLTGMMLSGGLYLFGTAYVVSPYL 127
Query: 388 --DISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
D+S L A AK IA P +H NG +++ W K L+ K V G
Sbjct: 128 GWDLSSASLAAAFGALPFAAKAAAKFSIAWPFLFHCLNGTKYMVWSWGKLLNNKAVIQAG 187
>UniRef50_Q0BQC4 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=3; Rhodospirillales|Rep: Succinate
dehydrogenase cytochrome b556 subunit - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 197
Score = 66.1 bits (154), Expect = 7e-10
Identities = 40/106 (37%), Positives = 51/106 (48%)
Frame = +1
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLN 426
++RPLSPHL +Y + +T LSI HR TG + + L LV+ H ++ G
Sbjct: 73 IHRPLSPHLQVYRWPITMALSILHRVTG-VAAAIGTLLLTWWLVAAATSDHAYDIVSGFM 131
Query: 427 LSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
S L L A L YHF NGIRHL WD G E + Y
Sbjct: 132 RSGFGLLLLFGWTVA-LVYHFINGIRHLVWDAGYGFDKHEANRSSY 176
>UniRef50_A4TYJ4 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=2; Proteobacteria|Rep: Succinate
dehydrogenase cytochrome b556 subunit - Magnetospirillum
gryphiswaldense
Length = 138
Score = 65.7 bits (153), Expect = 9e-10
Identities = 37/101 (36%), Positives = 51/101 (50%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
NRPLSPHL +Y L A++SITHR TG+ L AL + + + +
Sbjct: 17 NRPLSPHLDVYRLPLLAIMSITHRITGVGLAIGMFALAWWLCAAASGPAEFAVAQAVFGS 76
Query: 430 SPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVY 552
LFL +A L +H ++GIRHL WD+ G I + Y
Sbjct: 77 FLGKLFLFGWTVA--LFFHLSHGIRHLLWDSGWGFEIPQAY 115
>UniRef50_UPI0001555CD6 Cluster: PREDICTED: similar to succinate
dehydrogenase complex, subunit C, integral membrane
protein, 15kDa; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to succinate dehydrogenase complex,
subunit C, integral membrane protein, 15kDa -
Ornithorhynchus anatinus
Length = 157
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +1
Query: 352 SALGIGALVSQNDISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKG 531
S G+ AL+ + +++ L+L PA + AK +A P YH NGIRHL WD KG
Sbjct: 71 SLFGLAALLLPGSFESQLELVKSLSLGPALIHTAKFALAFPFMYHTWNGIRHLVWDLGKG 130
Query: 532 LSIKEVYSTGYAM 570
L I +++ +G A+
Sbjct: 131 LKIPQLHQSGVAV 143
>UniRef50_Q4T7S7 Cluster: Chromosome undetermined SCAF8004, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF8004,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 129
Score = 63.3 bits (147), Expect = 5e-09
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1
Query: 301 VLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKVIIAAPLG 480
++SITHR TG+ L+ SA + AL+ Y+ MI L++ P + +AK+ IA P+
Sbjct: 60 MMSITHRGTGVGLSGAISAFAVAALLLPGSYPDYLDMISSLSIGPVLIGMAKLGIAFPVS 119
Query: 481 YHFANGIRHL 510
YH NGIRHL
Sbjct: 120 YHTYNGIRHL 129
>UniRef50_Q9PEF8 Cluster: Succinate dehydrogenase, membrane anchor
subunit; n=11; Xanthomonadaceae|Rep: Succinate
dehydrogenase, membrane anchor subunit - Xylella
fastidiosa
Length = 142
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/109 (34%), Positives = 52/109 (47%)
Frame = +1
Query: 241 AKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEG 420
A RPLSPHL +Y +Q+ V SI HRATG+ L+ + G L + +
Sbjct: 13 ATRERPLSPHLQVYRWQMQMVTSILHRATGVFLSLGVLVIAAGLLALMFGAATWDYFRSC 72
Query: 421 LNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYA 567
LNL FL ++ GYH NGIRH+ D G +I + +A
Sbjct: 73 LNLWYGQCFL--LVWTWCFGYHLCNGIRHIAQDFGCGFAISSFVRSSWA 119
>UniRef50_Q9G8V4 Cluster: Succinate:cytochrome c oxidoreductase
subunit 3; n=1; Rhodomonas salina|Rep:
Succinate:cytochrome c oxidoreductase subunit 3 -
Rhodomonas salina (Cryptomonas salina)
Length = 128
Score = 63.3 bits (147), Expect = 5e-09
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHR-ATGMMLTTYASALGIGALVSQ--NDISHYITMIEGL 423
RPL+PHL +Y QLT++ SI HR + G++ + L + N S Y
Sbjct: 6 RPLAPHLLVYKPQLTSIFSIFHRISAGILFVVFTILLFLSYCFDYYLNFFSFYFIFYYFF 65
Query: 424 NLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
++ + +H NG+RH+ WD GL IK VY TG
Sbjct: 66 PFFNLIIYFVSYFLTFIFLFHMVNGLRHISWDFGLGLEIKNVYITG 111
>UniRef50_Q73FV2 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=5; Wolbachia|Rep: Succinate dehydrogenase,
cytochrome b556 subunit - Wolbachia pipientis wMel
Length = 125
Score = 62.5 bits (145), Expect = 9e-09
Identities = 38/100 (38%), Positives = 46/100 (46%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
+RPLSPHL IY Q+T+ SI HR TG++L L ++ I L
Sbjct: 3 DRPLSPHLQIYKVQVTSFFSIMHRLTGILLFLLLMILSWYFILHVYFPELLIVRYLNALL 62
Query: 430 SPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEV 549
LA V+ YHF NGIRHL WD L I V
Sbjct: 63 FTPVAKLAYVLCFISFVYHFLNGIRHLLWDVGLNLEITGV 102
>UniRef50_P80478 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=1; Porphyra purpurea|Rep: Succinate
dehydrogenase cytochrome b560 subunit - Porphyra
purpurea
Length = 125
Score = 62.5 bits (145), Expect = 9e-09
Identities = 33/101 (32%), Positives = 55/101 (54%)
Frame = +1
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLN 426
+NRP+SPHLTIY+ Q +++ SI HR +G+ + T ++ + ++ + + LN
Sbjct: 4 INRPISPHLTIYNTQKSSLFSIWHRISGVAMFTLIASPPLFLKLATFSYKSFNILDLMLN 63
Query: 427 LSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEV 549
S L VII+ YH NGIRH WD+ ++ + +
Sbjct: 64 NSSLILPWFIVIISVIFLYHIINGIRHFLWDSVVNVNTESI 104
>UniRef50_Q04487 Cluster: Putative succinate dehydrogenase
[ubiquinone] cytochrome b subunit, mitochondrial
precursor; n=2; Saccharomyces cerevisiae|Rep: Putative
succinate dehydrogenase [ubiquinone] cytochrome b
subunit, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 196
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Frame = +1
Query: 214 KEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLT----TYASALGIGALVS 381
KEE V K RP+SPHLT+Y +++ LS HR +G++L + LG+ ++
Sbjct: 61 KEEELLVSQRK-KRPISPHLTVYEPEMSWYLSSLHRISGVLLALGFYAFTITLGVTTIMG 119
Query: 382 QNDISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
+ + + + ++AK A +HF NGIRHL WD L+ + V TG
Sbjct: 120 MDTTFQDLNKWYHEKMPKWSQWVAKGSAAYLFAFHFGNGIRHLIWDMGYELTNRGVIKTG 179
>UniRef50_Q2RV42 Cluster: Succinate dehydrogenase, cytochrome b
subunit precursor; n=1; Rhodospirillum rubrum ATCC
11170|Rep: Succinate dehydrogenase, cytochrome b subunit
precursor - Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255)
Length = 132
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +1
Query: 253 RPLSPHLTIYSF--QLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLN 426
RP+SPHL +Y ++T++LSIT R G L + + +V+ T ++G
Sbjct: 6 RPISPHLQVYKLHTKVTSMLSITFRVFGAALMVGGTFFFLLWIVAAGSGEQAFTSVQGFY 65
Query: 427 LSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYA 567
SP +L + L YH NGIRH+ WDT G + + TG A
Sbjct: 66 GSPFG-YLVLFGLTVVLFYHLCNGIRHMLWDTGFGFDMPTLRKTGAA 111
>UniRef50_Q8VS00 Cluster: Succinate dehydrogenase subunit C; n=7;
canis group|Rep: Succinate dehydrogenase subunit C -
Ehrlichia chaffeensis
Length = 128
Score = 61.3 bits (142), Expect = 2e-08
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVS---QNDISHYITMIEGL 423
RPLSPHL IY ++ LSI HR TGM+L L G ++S + +
Sbjct: 5 RPLSPHLQIY--KVVYKLSIMHRFTGMILFLGLLVLSWGFILSFLCPQVVYRICSFFCNS 62
Query: 424 NLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
+S +L L I L YH+ NGIRH++WD GLS V +TG
Sbjct: 63 YVSLYSLKLITFIWLNVLCYHYMNGIRHIFWDLGLGLSKSAVRTTG 108
>UniRef50_P48934 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=1; Chondrus crispus|Rep: Succinate
dehydrogenase cytochrome b560 subunit - Chondrus crispus
(Carragheen)
Length = 127
Score = 60.9 bits (141), Expect = 3e-08
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASA--LGIGALVSQNDISHYITMIEGL 423
NRP++PHL +Y+ QL+++ SI HR +G+ L + + + I ++S N + +T+I
Sbjct: 9 NRPIAPHLLVYTPQLSSLFSIWHRISGVGLAFFFTTFLIFIRIILSSNFACNLLTLI-SF 67
Query: 424 NLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIK 543
+S + + I L YH NG RH+ WD L IK
Sbjct: 68 EISQWIIIYFNLFILLFLFYHLFNGTRHIIWDFGFLLDIK 107
>UniRef50_Q608E4 Cluster: Putative succinate dehydrogenase,
cytochrome b556 subunit; n=1; Methylococcus
capsulatus|Rep: Putative succinate dehydrogenase,
cytochrome b556 subunit - Methylococcus capsulatus
Length = 138
Score = 60.5 bits (140), Expect = 3e-08
Identities = 38/95 (40%), Positives = 52/95 (54%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RPLSPHL +Y +TA+LSI+HR TG++L L + + S Y + L+
Sbjct: 16 RPLSPHLQVYRLPVTALLSISHRITGVLLGIGLIGLVLVLMSVVQGPSAYAPVHAFLS-G 74
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLS 537
A L + I A L +H ++GIRHL WDT G S
Sbjct: 75 IAGRSLLWIWITALL-FHLSHGIRHLVWDTGHGFS 108
>UniRef50_Q5PBE4 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=1; Anaplasma marginale str. St. Maries|Rep:
Succinate dehydrogenase cytochrome b556 subunit -
Anaplasma marginale (strain St. Maries)
Length = 127
Score = 60.1 bits (139), Expect = 5e-08
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
+RPLSPHL +Y + A+LSITHRA+G+ L S L ++ + I
Sbjct: 5 SRPLSPHLQVYKLPVAALLSITHRASGLFLFFGLSVLSWLFVL----LRCAPDCIAPFLA 60
Query: 430 SPATLFLAKVI---IAAPLGYHFANGIRHLYWDTAKGL 534
+P FL K++ YH+ NG+RHL WD GL
Sbjct: 61 NPLGFFLVKLLSFSCCVAFCYHYFNGVRHLLWDCGVGL 98
>UniRef50_Q0UAQ7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 174
Score = 60.1 bits (139), Expect = 5e-08
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Frame = +1
Query: 217 EEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDIS 396
E H + ++NRP+SPHL+IY Q+T S +R T +++T G L +
Sbjct: 39 EAHEILVKQRINRPVSPHLSIYRPQITWYSSGLYRLTAVIITGSFYLWGFAYLAAPYTGW 98
Query: 397 HYIT--MIEGLNLSPATLFL-AKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
H T M+ + PA + + K A P +H GIRHL WD G+ V +G+
Sbjct: 99 HLETQSMVAAVAAWPAAVKIGVKSFFALPFFFHAYQGIRHLVWDFGIGMKNAAVIKSGW 157
>UniRef50_A1DJB4 Cluster: Cytochrome b subunit of succinate
dehydrogenase, putative; n=1; Neosartorya fischeri NRRL
181|Rep: Cytochrome b subunit of succinate
dehydrogenase, putative - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 183
Score = 60.1 bits (139), Expect = 5e-08
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Frame = +1
Query: 157 YAQAASNAPKITFVKFEPPKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMM 336
+ + + P T ++ P+ ++ +L RP++PHL+IY +Q+ +V S R TG++
Sbjct: 27 HVRMQTTKPVATPLRVIKPETAQEELARQRLRRPVAPHLSIYKWQVHSVSSALERNTGLL 86
Query: 337 LTTYASALGIGALVSQ---NDISHYITMIEGLNLSPATLFLAKVIIAAPLGYHFANGIRH 507
L G LV+ D+S + +L A FL K+ +A P +H NGIR+
Sbjct: 87 LAGSLYLFGTSYLVAPWLGWDLSSAALVAAFGSLPVAAKFLLKLSVAWPFTFHLFNGIRY 146
Query: 508 LYWDTAKGLSIKEVY 552
+ T L+ + +
Sbjct: 147 VVSSTGYTLNSRSQF 161
>UniRef50_A7TDY9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 170
Score = 59.3 bits (137), Expect = 8e-08
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHR----ATGMMLTTYASALGIGALVSQNDISHYITMIE 417
NRP+SPHLTIY QLT LS HR A G + G+ +L+ +
Sbjct: 48 NRPISPHLTIYQPQLTWYLSSVHRVSCIALGACFYLVTISFGLSSLLGLGLTADSFANWY 107
Query: 418 GLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
+ S + L K + + F IRH WD KGLS+ VY +GY
Sbjct: 108 N-SWSSTSQSLVKGAFSYLFAFQFTLSIRHFMWDMGKGLSLSGVYRSGY 155
>UniRef50_A5CEW2 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=1; Orientia tsutsugamushi Boryong|Rep:
Succinate dehydrogenase, cytochrome b556 subunit -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 116
Score = 58.0 bits (134), Expect = 2e-07
Identities = 34/102 (33%), Positives = 50/102 (49%)
Frame = +1
Query: 259 LSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPA 438
+SPH+TIY Q++ +LSI HR +GM + AS + ++ I + NL
Sbjct: 1 MSPHITIYRMQMSMILSILHRLSGMAVFGGASIITWWLILCVYSDFDRIVVDIFYNLWFQ 60
Query: 439 TLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
L + +H GIRHL WDT G SIK + +G+
Sbjct: 61 ALIYLTIFTTC---FHLCTGIRHLIWDTGYGFSIKYINISGW 99
>UniRef50_Q98EF6 Cluster: Succinate dehydrogenase membrane anchor
subunit; n=12; Alphaproteobacteria|Rep: Succinate
dehydrogenase membrane anchor subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 139
Score = 57.6 bits (133), Expect = 2e-07
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +1
Query: 241 AKLNRPLSPHLTIYSFQLTAVLSITHRATG--MMLTTYASALGIGALVSQNDISHYITMI 414
A+ RPLSPHLTIY +T +SI HR TG + T A+ + A S ++
Sbjct: 11 ARRERPLSPHLTIYRPPITMTMSIIHRITGGALYFGTLLVAIWLMAAASSQATFDWVNWA 70
Query: 415 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGL 534
G L LF L +H G+RHL WDT GL
Sbjct: 71 FGTWLGRLILF----GYTWALMHHMLGGVRHLVWDTGAGL 106
>UniRef50_Q0FFA5 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=1; alpha proteobacterium HTCC2255|Rep:
Succinate dehydrogenase, cytochrome b556 subunit - alpha
proteobacterium HTCC2255
Length = 131
Score = 57.6 bits (133), Expect = 2e-07
Identities = 38/103 (36%), Positives = 53/103 (51%)
Frame = +1
Query: 235 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMI 414
+ K NRPLSPHLTIY Q++++ SI R TG+ L L I L++ + +Y I
Sbjct: 3 KRVKGNRPLSPHLTIYRPQMSSISSILVRITGVSL-ALGFILIITWLLAASTNVYYFDCI 61
Query: 415 EGLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIK 543
+ S + + + A L YH GIRHL WD G +K
Sbjct: 62 NSILTSWFGIIVLIGSVWA-LCYHSLGGIRHLIWDMGFGFDLK 103
>UniRef50_A3VBV7 Cluster: Succinate dehydrogenase cytochrome b-556
subunit; n=1; Rhodobacterales bacterium HTCC2654|Rep:
Succinate dehydrogenase cytochrome b-556 subunit -
Rhodobacterales bacterium HTCC2654
Length = 127
Score = 57.2 bits (132), Expect = 3e-07
Identities = 37/100 (37%), Positives = 48/100 (48%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
NRPLSPHL Y L A LSI HR TG+ + ++ L + ++ Y +
Sbjct: 8 NRPLSPHLQAYRLPLNAKLSILHRITGVAM-GFSGVLIVWYFLALATGPEYFETASAVLT 66
Query: 430 SPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEV 549
S + + I A L HFANG+RHL WDT K V
Sbjct: 67 SWFGDIVFFLSICA-LWLHFANGVRHLIWDTGSHFGQKTV 105
>UniRef50_A3UHW9 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=2; Hyphomonadaceae|Rep: Succinate
dehydrogenase, cytochrome b556 subunit - Oceanicaulis
alexandrii HTCC2633
Length = 134
Score = 56.0 bits (129), Expect = 7e-07
Identities = 36/99 (36%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RP+SPHL I+ + T SI HRATG+ A L + ++ Y E L
Sbjct: 9 RPISPHLEIWRWHATMASSIFHRATGVGNYIGAIFLTLWLVLLAAGPDAY-GGFEALMAG 67
Query: 433 PATLFLAKVIIAAPLG--YHFANGIRHLYWDTAKGLSIK 543
P L + V+ L YH NG+RHL WD KG K
Sbjct: 68 PLGLLVKLVLFLFTLSLIYHLINGVRHLVWDAGKGFEPK 106
>UniRef50_UPI000023F3BC Cluster: hypothetical protein FG01981.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01981.1 - Gibberella zeae PH-1
Length = 183
Score = 55.6 bits (128), Expect = 1e-06
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 6/160 (3%)
Frame = +1
Query: 70 MALFSCTRLGSRSVLASLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEEHHDVRNAKL 249
M+L + SR + + +R A + S AP IT ++ P+E H + N +L
Sbjct: 1 MSLINVLATSSRPSV-NFTRNTAIIAFTRLLSQKSQAPTITNLE---PEEGHQILVNQRL 56
Query: 250 NRPLSPHLTIYSF-QLTAVLSITHRATGMML--TTYASALGIGALVSQNDISH-YITMIE 417
NRP++P+L IY Q+ S R TG+++ T Y + LG A+ + + ++
Sbjct: 57 NRPVTPNLGIYKIGQVWFSASAWTRITGLIVGGTAYLT-LGAHAVAPHLGLGFDSVALVS 115
Query: 418 GLNLSP--ATLFLAKVIIAAPLGYHFANGIRHLYWDTAKG 531
P A + ++ P YHF NGIRHL +D G
Sbjct: 116 AFGALPFVAKAAIKFSLLGFPFSYHFINGIRHLVFDLGIG 155
>UniRef50_A3JD92 Cluster: Succinate dehydrogenase/fumarate
reductase, cytochrome b subunit; n=1; Marinobacter sp.
ELB17|Rep: Succinate dehydrogenase/fumarate reductase,
cytochrome b subunit - Marinobacter sp. ELB17
Length = 109
Score = 55.6 bits (128), Expect = 1e-06
Identities = 33/98 (33%), Positives = 50/98 (51%)
Frame = +1
Query: 271 LTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFL 450
+ +Y QLT+VLS HR +G+ L+ A L +G L++ + T + L A L
Sbjct: 1 MQVYRPQLTSVLSFGHRLSGLFLSLGAVLL-VGWLLTAATEAQAFTHLNAW-LGSALGLL 58
Query: 451 AKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
I L +H NGIRHL WD G + ++Y +G+
Sbjct: 59 LLFIWTLALFFHLCNGIRHLLWDAVIGFELVDIYRSGW 96
>UniRef50_Q0BX77 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=1; Hyphomonas neptunium ATCC 15444|Rep:
Succinate dehydrogenase, cytochrome b556 subunit -
Hyphomonas neptunium (strain ATCC 15444)
Length = 132
Score = 55.2 bits (127), Expect = 1e-06
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATG--MMLTTYASALGIGALVSQNDISHYITMIEGLN 426
RPLSPH+ I+ + ++A+ SITHR TG + + T+ A + AL D Y M EG+
Sbjct: 10 RPLSPHIQIWRWHISALASITHRITGGALYVGTFLIAAWLVALAISPDA--YAAM-EGII 66
Query: 427 LS-PATLFLAKVIIAAPLGYHFANGIRHLYWD 519
S P + L + A +H NGIRHL WD
Sbjct: 67 TSIPGKIVL--FLWAVATLFHLYNGIRHLIWD 96
>UniRef50_Q952R1 Cluster: Succinate dehydrogenase subunit 3; n=6;
eudicotyledons|Rep: Succinate dehydrogenase subunit 3 -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 108
Score = 55.2 bits (127), Expect = 1e-06
Identities = 33/89 (37%), Positives = 41/89 (46%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RPLSPHL IY QLT+ SI HR +G L T + L Y + S
Sbjct: 5 RPLSPHLPIYKPQLTSTFSIFHRISGAFLATIVFFFYLLCLKIGLICFTYENFYQFFFYS 64
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWD 519
+ ++ I A L YH NG+RHL D
Sbjct: 65 SKLILISVEITALALSYHLYNGVRHLLTD 93
>UniRef50_P48935 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=1; Cyanidium caldarium|Rep: Succinate
dehydrogenase cytochrome b560 subunit - Cyanidium
caldarium
Length = 132
Score = 54.4 bits (125), Expect = 2e-06
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASAL--GIGALVSQNDISHYITMIEGL 423
NRPLSP++TIYS Q T++ SI HR +G+ L + L I L + ++
Sbjct: 5 NRPLSPYVTIYSSQWTSISSIFHRLSGLYLVFFLFVLFCSIKFLFCFSTFWFVYKFVKTC 64
Query: 424 NLSPATLFLAKVIIAA-PLGYHFANGIRHLYWD 519
+ F+ ++ + L YHF G+RHL WD
Sbjct: 65 FFFILSFFIVFIVFSMYSLFYHFFIGLRHLVWD 97
>UniRef50_Q016R6 Cluster: Chromosome 06 contig 1, DNA sequence; n=2;
Ostreococcus|Rep: Chromosome 06 contig 1, DNA sequence -
Ostreococcus tauri
Length = 205
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = +1
Query: 280 YSFQLTAVLSITHRATGMMLTTYASALGIGALVSQND-ISHYITMIEGLNLSPATLFLAK 456
Y F + A+ SIT+R TG++L+ S+ G+ ALV + + I +++ SP + K
Sbjct: 93 YKFPVVALSSITNRVTGVVLSGAVSSAGVIALVGGAEAVPAVIELVKA--QSPVGVAPLK 150
Query: 457 VIIAAPLGYHFANGIRHLYWD-TAKGLSIKEVYSTGYAM 570
++ P +H G RHL WD T KG+ ST A+
Sbjct: 151 FALSFPFVFHTLGGFRHLVWDATTKGIDNASAKSTSVAL 189
>UniRef50_A3VQE8 Cluster: Succinate dehydrogenase cytochrome B-556
subunit; n=1; Parvularcula bermudensis HTCC2503|Rep:
Succinate dehydrogenase cytochrome B-556 subunit -
Parvularcula bermudensis HTCC2503
Length = 142
Score = 52.4 bits (120), Expect = 9e-06
Identities = 33/107 (30%), Positives = 54/107 (50%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
+RPLSPHL I+ + +T SI HRATG+ L S L + L+ + + G
Sbjct: 18 DRPLSPHLQIWRWSVTMATSILHRATGIALYA-GSVLLVLWLLGGALTEGFYDGVTGFLG 76
Query: 430 SPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
SP + + A + +H +NGI++L WD+ + L + T + +
Sbjct: 77 SPFGILILVGFTWAQM-FHLSNGIKYLIWDSGRLLQREVAKKTAWGV 122
>UniRef50_Q2GEZ8 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=1; Neorickettsia sennetsu str. Miyayama|Rep:
Succinate dehydrogenase, cytochrome b556 subunit -
Neorickettsia sennetsu (strain Miyayama)
Length = 140
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = +1
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLN 426
+ PLSP L Y F L A+LSI+HR +G L Y S ++ +
Sbjct: 16 MRSPLSPSLFAYRFPLAAILSISHRLSGAFLFFYTGFFSWYVFACFYMPSSFLHTV---- 71
Query: 427 LSP-ATLFLAKVIIAAPL---GYHFANGIRHLYWDTAKGLS 537
LSP + +LA ++ L YH +G+RHL+WD GLS
Sbjct: 72 LSPFFSGYLAGFLLCFFLFFFCYHLCSGVRHLFWDFCTGLS 112
>UniRef50_Q0CIZ1 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 198
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Frame = +1
Query: 172 SNAPKITFVKFEPPKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYA 351
S + K ++ + ++ + +L RP+SPHL IY +++ + S R TG+ML+
Sbjct: 47 SQSTKPVRLQVQTVEQGQQHLARQRLRRPVSPHLAIYRWEMNMISSAMERNTGIMLSGAL 106
Query: 352 SALGIGALVSQN---DISHYITMIEGLNLSP-ATLFLAKVIIAAPLGYHFANGIRHLYWD 519
LVS D+S +++ P A K A P +HF NG+R
Sbjct: 107 YLFATAYLVSPMMGWDLSS-ASLVTAFGALPWAVKAAVKFAAAWPFTFHFFNGVRFTVAA 165
Query: 520 TAKGLSIKE 546
TA+ L+ +E
Sbjct: 166 TARTLNNRE 174
>UniRef50_Q57AZ2 Cluster: SdhC, succinate dehydrogenase, cytochrome
b556 subunit; n=8; Rhizobiales|Rep: SdhC, succinate
dehydrogenase, cytochrome b556 subunit - Brucella
abortus
Length = 132
Score = 50.4 bits (115), Expect = 4e-05
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGA-LVSQNDISHYITMIEGLNL 429
RPLSPHL+IY +T +SI HR TG L Y L + A L+S I L
Sbjct: 10 RPLSPHLSIYKPVITMTMSIVHRITGGAL--YFGTLLLAAWLISAATSEECFNTINALFS 67
Query: 430 SPATLFLAKVIIAA---PLGYHFANGIRHLYWDTAKGL 534
S ++ ++I+ L +H A G+RH WDT +
Sbjct: 68 S----WIGRLILFGYTWALLHHLAGGVRHFIWDTGAAM 101
>UniRef50_Q7S1S2 Cluster: Putative uncharacterized protein
NCU07756.1; n=2; Sordariomycetes|Rep: Putative
uncharacterized protein NCU07756.1 - Neurospora crassa
Length = 180
Score = 50.4 bits (115), Expect = 4e-05
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Frame = +1
Query: 94 LGSRSVLASLSRFPARLNSV-NYAQAASNAPKITFVKFEPPKEEHHDVRNAKLNRPLSPH 270
L R+ +L R A +SV A A+ + + P +E + +LNRP+SPH
Sbjct: 2 LAQRAGTTALRRVAAAPSSVFKLAPFAAMQTRPIQTERLTPADEAAILAKQRLNRPVSPH 61
Query: 271 LTIYSFQLTAVL-SITHRATGMMLT--TYASALG-IGALVSQNDISHYITMIEGLNLSPA 438
L IY + T S R TG + YASA+ + A + + + L A
Sbjct: 62 LEIYDPKQTWFGGSAWQRITGASFSGALYASAVAYLAAPLVGWHLESASLVAAAAALPVA 121
Query: 439 TLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGY 564
K ++A P +H NG+RHL +D G S + TG+
Sbjct: 122 VKGALKFLVAWPFVFHAINGVRHLAFDLGIGFSRATIIKTGW 163
>UniRef50_Q6ND90 Cluster: Succinate dehydrogenase membrane
anchor/cytochrome b subunit precursor; n=12;
Alphaproteobacteria|Rep: Succinate dehydrogenase
membrane anchor/cytochrome b subunit precursor -
Rhodopseudomonas palustris
Length = 132
Score = 50.0 bits (114), Expect = 5e-05
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +1
Query: 241 AKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEG 420
A++ RPLSPH+ Y + LT +SI HRATG+ L + L + + Y ++
Sbjct: 3 ARIERPLSPHMQAYRWSLTMTMSIVHRATGIALYSGTLLLAWWLIACAAGPTAYAN-VQA 61
Query: 421 LNLSPATLFLAKVIIAA---PLGYHFANGIRHLYWDTAKG 531
S ++ ++I+ L +H +G+RH WD G
Sbjct: 62 FTGS----WIGRLIVFGYTWSLMHHMLSGVRHFVWDLGYG 97
>UniRef50_Q6G1S1 Cluster: Succinate dehydrogenase cytochrome b560
subunit; n=3; Bartonella|Rep: Succinate dehydrogenase
cytochrome b560 subunit - Bartonella henselae
(Rochalimaea henselae)
Length = 133
Score = 50.0 bits (114), Expect = 5e-05
Identities = 30/98 (30%), Positives = 44/98 (44%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RP SPH++IY + +T +SI HR TG+ L L I + + + T+
Sbjct: 10 RPRSPHVSIYRWTITMAMSIAHRITGIALYFGMVFLAIWLISISCGVEAFRTVHRIYTSF 69
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKE 546
P L +A +H G+RH+ WD L KE
Sbjct: 70 PGLCILFLYTLAGI--HHMVGGVRHIVWDIKPCLLAKE 105
>UniRef50_Q59659 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=22; Rhodobacterales|Rep: Succinate
dehydrogenase cytochrome b556 subunit - Paracoccus
denitrificans
Length = 130
Score = 48.8 bits (111), Expect = 1e-04
Identities = 31/107 (28%), Positives = 48/107 (44%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
NRPLSPHL +Y L A+ SI R TG L + + + + +
Sbjct: 8 NRPLSPHLQVYRLPLAAITSIMTRITGHALVAGIVLITWWLVAAVTSPGAFACADWVVRS 67
Query: 430 SPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
+ L + A L YH G+RHL++D GL I++ + + A+
Sbjct: 68 WLGFIILTGSMWA--LWYHLLAGLRHLFYDAGYGLEIEQAHKSSQAL 112
>UniRef50_Q3C2D8 Cluster: Succinate dehydrogenase complex, subunit C
delta5 alternative splicing variant; n=11;
Catarrhini|Rep: Succinate dehydrogenase complex, subunit
C delta5 alternative splicing variant - Homo sapiens
(Human)
Length = 150
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1
Query: 235 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLT 342
+N NRPLSPH+TIYS+ L +SI HR TG+ L+
Sbjct: 44 KNIGSNRPLSPHITIYSWSLPMAMSICHRGTGIALS 79
>UniRef50_A7HT20 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=2; Rhizobiales|Rep: Succinate dehydrogenase
cytochrome b556 subunit - Parvibaculum lavamentivorans
DS-1
Length = 135
Score = 46.0 bits (104), Expect = 8e-04
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +1
Query: 247 LNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITM--IEG 420
++RPLSPHL IY +T +SI HR TGM L + + + + Y T + G
Sbjct: 8 VSRPLSPHLQIYRVTITMAMSIIHRFTGMGLYAGTALVAWWLVAAATGPEAYATFQAVAG 67
Query: 421 LNLSPATLFLAKVIIAAPLGYHFANGIRHLYWD 519
+ LF L +H G+R+L WD
Sbjct: 68 SWIGQLVLF----GFTWALLHHLFGGLRYLLWD 96
>UniRef50_Q8W9Q8 Cluster: Succinate:cytochrome c oxidoreductase
subunit 3; n=1; Mesostigma viride|Rep:
Succinate:cytochrome c oxidoreductase subunit 3 -
Mesostigma viride
Length = 131
Score = 46.0 bits (104), Expect = 8e-04
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALV-SQNDISHYITMIEGLNL 429
RPLSPH+++Y Q ++ S+ HR +G +L + +++ S + Y L L
Sbjct: 7 RPLSPHVSVYQPQWNSMFSLFHRISGSVLVISLFTFFLFSIIYSFHATRSYELFSFFLTL 66
Query: 430 SPATLF-LAKVIIAAPLGYHFANGIRHLYWDTAK 528
+ LF ++ I L YH NGI H+ + K
Sbjct: 67 EDSKLFSFVELTILFALSYHIINGIHHIMIENDK 100
>UniRef50_A0Y6Y3 Cluster: Putative succinate dehydrogenase,
hydrophobic subunit, cytochrome b556 with sdhD; n=2;
Alteromonadales|Rep: Putative succinate dehydrogenase,
hydrophobic subunit, cytochrome b556 with sdhD -
Alteromonadales bacterium TW-7
Length = 153
Score = 44.0 bits (99), Expect = 0.003
Identities = 32/92 (34%), Positives = 42/92 (45%)
Frame = +1
Query: 244 KLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGL 423
K RP++ LT S TA SI HR TG+ L +A I A + ++GL
Sbjct: 30 KKQRPVNLDLTTISMPATAKASIFHRVTGVAL-FFALTFVIWAWSESLSSAESFEFVKGL 88
Query: 424 NLSPATLFLAKVIIAAPLGYHFANGIRHLYWD 519
F+A I+ LGYH GIRH+ D
Sbjct: 89 FNGFIAKFIAWGTISV-LGYHLIGGIRHMVMD 119
>UniRef50_Q9ZZR3 Cluster: Succinate dehydrogenase cytochrome B560
subunit; n=1; Cyanidioschyzon merolae|Rep: Succinate
dehydrogenase cytochrome B560 subunit - Cyanidioschyzon
merolae (Red alga)
Length = 137
Score = 43.6 bits (98), Expect = 0.004
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATG--MMLTTYASALGIGALVSQNDISHYITMIEGLN 426
RP++PHLTIY+ Q +V SI HR +G +M+ + S LG+ + ++ + N
Sbjct: 7 RPIAPHLTIYNAQWNSVFSIFHRISGVFIMVFIFFSTLGLFFFKFYSPTIMCVSFLWLFN 66
Query: 427 LSPATLFLAKV-IIAAPLGYHFANGIRHL 510
+F++ + II YH +GI HL
Sbjct: 67 -KVYWIFISIIFIIFMSFFYHLCSGIYHL 94
>UniRef50_Q4FP23 Cluster: Succinate dehydrogenase cytochrome b; n=3;
Bacteria|Rep: Succinate dehydrogenase cytochrome b -
Pelagibacter ubique
Length = 127
Score = 43.2 bits (97), Expect = 0.006
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGM--MLTTYASALGIGALVSQNDISHYITMIEGL 423
N PLSPH+ IY + +++++SI+HR TG+ + L I +L+ + S+ +T
Sbjct: 4 NNPLSPHIQIYRWHISSLVSISHRITGIVNIFAITVICLWIFSLL-LGESSYDLT----- 57
Query: 424 NLSPATLFLAKVIIAAPLGYHF--ANGIRHLYWDTAKGLSIKEVYSTG 561
L ++F +II + F + IRHL D G +K TG
Sbjct: 58 KLFLQSIFGKFIIICLTWSFSFQVLSEIRHLVMDLGYGFELKTTKITG 105
>UniRef50_Q94FP3 Cluster: Succinate dehydrogenase subunit 3; n=1;
Glycine max|Rep: Succinate dehydrogenase subunit 3 -
Glycine max (Soybean)
Length = 157
Score = 43.2 bits (97), Expect = 0.006
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHR-----ATGMMLTTYASALGIGALVSQNDISHYITMIE 417
RPLSPHL +Y QL++ LSI +R G++L Y + +G LVS S Y +
Sbjct: 70 RPLSPHLPLYQPQLSSTLSIFNRIAGAFLAGVILVFYMIYMKLG-LVSLTYDSFYQFIFY 128
Query: 418 GLNLSPATLFLAKVIIAAPLGYHFANGIRHLY 513
L+ L I A + YH + IRHL+
Sbjct: 129 SSKLN----LLVMEISALAVSYHLYSAIRHLF 156
>UniRef50_P63725 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=102; Proteobacteria|Rep: Succinate
dehydrogenase cytochrome b556 subunit - Salmonella
typhimurium
Length = 129
Score = 40.7 bits (91), Expect = 0.030
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +1
Query: 232 VRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITM 411
+RN K RP++ L F +TA+ SI HR +G++ T+ A+GI + +S
Sbjct: 2 IRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVI--TFI-AVGILLWLLGTSLSSPEGF 58
Query: 412 IEGLNLSPATLFLAKVI---IAAPLGYHFANGIRHLYWD 519
+ ++ F+ K I I L YH GIRH+ D
Sbjct: 59 QQAADIMDG--FIVKFIMWGILTALAYHVIVGIRHMLMD 95
>UniRef50_Q9A2M8 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=2; Caulobacter|Rep: Succinate dehydrogenase,
cytochrome b556 subunit - Caulobacter crescentus
(Caulobacter vibrioides)
Length = 135
Score = 39.5 bits (88), Expect = 0.069
Identities = 29/103 (28%), Positives = 43/103 (41%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RP+SPHL ++ + +T SI HR + L A L A Y + + L
Sbjct: 11 RPMSPHLQVWRWHITMACSILHRGCVVGLWVGAVILAGWAAALAAGPDAYASYVGLLGSP 70
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
L L A + ++ A IR +WD KG + + TG
Sbjct: 71 IGKLVLLGETFA--VFFNVAYTIRQTFWDAGKGFAPRTADMTG 111
>UniRef50_A6EWE3 Cluster: Succinate dehydrogenase; n=1; Marinobacter
algicola DG893|Rep: Succinate dehydrogenase -
Marinobacter algicola DG893
Length = 150
Score = 39.1 bits (87), Expect = 0.091
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +1
Query: 214 KEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDI 393
K E N+K RP++ L + F L A+ SI HR +G+++ + + G +S +
Sbjct: 20 KRECESAVNSK--RPVNLDLGKFHFPLPAITSILHRVSGIIIFVGVAFMLYGLQLSLSGE 77
Query: 394 SHYITMIEGLNLSPATLFLAKVI---IAAPLGYHFANGIRHLYWDTAKG 531
+ + + L+ FLAK+I I + L YH GI+HL D G
Sbjct: 78 EGFSRVSDLLD-----SFLAKLITWGILSALLYHLVAGIKHLLMDMGIG 121
>UniRef50_A3K3K3 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=1; Sagittula stellata E-37|Rep: Succinate
dehydrogenase, cytochrome b556 subunit - Sagittula
stellata E-37
Length = 131
Score = 39.1 bits (87), Expect = 0.091
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = +1
Query: 250 NRPLSPHLT--IYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGL 423
NRPLSP + Y Q+T++ SI R TG+ A+ L + L + Y ++ G+
Sbjct: 10 NRPLSPFMIGQYYRPQMTSISSIMVRITGIASLGTAALLVLWLLCAATSPDAY-AVVNGI 68
Query: 424 NLSPATLFLAKVIIAAP---LGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
T F+ V++ + YH +RH+ WD + I+ G+ M
Sbjct: 69 ----LTSFIGDVLMLLASWAIWYHMLGRLRHVIWDLGYMVEIEPSEMMGWIM 116
>UniRef50_Q9FXX8 Cluster: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MTH16; n=6; Arabidopsis
thaliana|Rep: Arabidopsis thaliana genomic DNA,
chromosome 5, P1 clone:MTH16 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 240
Score = 39.1 bits (87), Expect = 0.091
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLT--TYASAL 360
RPLSPHL++Y Q+ ++LSI +R +G+ LT T+A L
Sbjct: 152 RPLSPHLSVYQPQMNSMLSIFNRISGVYLTGVTFAGYL 189
>UniRef50_Q94FP2 Cluster: Succinate dehydrogenase subunit 3; n=6;
Oryza sativa|Rep: Succinate dehydrogenase subunit 3 -
Oryza sativa (Rice)
Length = 129
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +1
Query: 211 PKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMML 339
P H + NRPLSPHL + QL+A SI+HR G L
Sbjct: 68 PLHTSHPLSAPVANRPLSPHLPLKKPQLSATFSISHRIFGAAL 110
>UniRef50_A4EZ53 Cluster: Succinate dehydrogenase cytochrome b-556
subunit; n=2; Rhodobacteraceae|Rep: Succinate
dehydrogenase cytochrome b-556 subunit - Roseobacter sp.
SK209-2-6
Length = 103
Score = 37.9 bits (84), Expect = 0.21
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 307 SITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKVIIAAPLG-- 480
SI R TG L A + + L++ + Y + GL S F V++ + LG
Sbjct: 3 SILTRITGNALII-AVIMVVWWLLAAATSAEYFELANGLLTS---WFGRIVLLLSTLGIW 58
Query: 481 YHFANGIRHLYWDTAKGLSIKEVYSTGY 564
YHF G+RHLY+D GL I+ G+
Sbjct: 59 YHFLAGLRHLYFDAGHGLDIETAEKLGW 86
>UniRef50_Q1N6I2 Cluster: Succinate dehydrogenase, cytochrome b556
subunit; n=2; Gammaproteobacteria|Rep: Succinate
dehydrogenase, cytochrome b556 subunit - Oceanobacter
sp. RED65
Length = 125
Score = 36.7 bits (81), Expect = 0.48
Identities = 28/93 (30%), Positives = 42/93 (45%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RP + L+ SF L A+ SITHR G++L L S + + +
Sbjct: 5 RPKNLDLSTISFPLPALTSITHRIAGVILFVGVIFLLCVLSDSLQSAQGFAQAKQSMTTG 64
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKG 531
+ F+ +++A L YHF GI+HL D G
Sbjct: 65 FGS-FITWGLLSA-LAYHFVAGIKHLVMDFGIG 95
>UniRef50_A1SWY2 Cluster: Succinate dehydrogenase, cytochrome b
subunit; n=1; Psychromonas ingrahamii 37|Rep: Succinate
dehydrogenase, cytochrome b subunit - Psychromonas
ingrahamii (strain 37)
Length = 144
Score = 36.7 bits (81), Expect = 0.48
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMM----LTTYASALGIGALVSQNDISHYITMIE 417
+RP + LT F +TA SI HR +G++ L + + L +L S+ D ++ + I+
Sbjct: 24 DRPKNLDLTTVQFPITATASILHRISGIIVFIALAIFLTLLN-QSLTSETDFNNVMGYID 82
Query: 418 GLNLSPATLFLAKVIIAAPLG--YHFANGIRHLYWD 519
F+ +I AA G YH G+RH+ D
Sbjct: 83 -------NFFIGFIIWAALTGLTYHIVFGVRHMIQD 111
>UniRef50_Q7XYC5 Cluster: Succinate dehydrogenase subunit 3; n=1;
Triticum aestivum|Rep: Succinate dehydrogenase subunit 3
- Triticum aestivum (Wheat)
Length = 132
Score = 36.7 bits (81), Expect = 0.48
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMML 339
NRPLSPHL + QL+A SI+HR G L
Sbjct: 84 NRPLSPHLPLKKPQLSATFSISHRIFGAAL 113
>UniRef50_A4A3L0 Cluster: Succinate dehydrogenase cytochrome b-556
subunit; n=3; Gammaproteobacteria|Rep: Succinate
dehydrogenase cytochrome b-556 subunit - Congregibacter
litoralis KT71
Length = 124
Score = 35.9 bits (79), Expect = 0.84
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +1
Query: 244 KLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGAL-VSQNDISHYITMIEG 420
K NRP++ + +TA SI HR +G+++ AS L + AL +S Y + E
Sbjct: 2 KDNRPVNLDIGTIRLPITAYASILHRVSGVIMVV-ASFLLLWALDLSLAGPESYARLGE- 59
Query: 421 LNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSI 540
L SP F+ I A L YH G++HL D G S+
Sbjct: 60 LFGSPLLKFVIWGIATALL-YHSFAGVKHLIMDFGVGESM 98
>UniRef50_Q5DC80 Cluster: SJCHGC03139 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03139 protein - Schistosoma
japonicum (Blood fluke)
Length = 132
Score = 35.9 bits (79), Expect = 0.84
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 235 RNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMML 339
+N RP SPHL IYS L S HRATG+ +
Sbjct: 65 KNITGGRPWSPHLQIYSAPLVMRFSFLHRATGIAM 99
>UniRef50_Q5QU28 Cluster: Succinate dehydrogenase/fumarate reductase
cytochrome b subunit; n=22; Gammaproteobacteria|Rep:
Succinate dehydrogenase/fumarate reductase cytochrome b
subunit - Idiomarina loihiensis
Length = 124
Score = 35.5 bits (78), Expect = 1.1
Identities = 27/92 (29%), Positives = 40/92 (43%)
Frame = +1
Query: 244 KLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGL 423
K RP++ L+ A SI HR +G+ + ++ A I A IE +
Sbjct: 2 KKERPVNLDLSTIKLPAAAKASILHRISGVAML-FSLAFLIWAFAVSLSGPEGFAQIESI 60
Query: 424 NLSPATLFLAKVIIAAPLGYHFANGIRHLYWD 519
S F+ I+ A LG+H G+RHL D
Sbjct: 61 MTSFIAKFIGWGILTA-LGFHLIIGLRHLVMD 91
>UniRef50_Q3J8C0 Cluster: Succinate dehydrogenase, cytochrome b
subunit; n=1; Nitrosococcus oceani ATCC 19707|Rep:
Succinate dehydrogenase, cytochrome b subunit -
Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848)
Length = 140
Score = 35.5 bits (78), Expect = 1.1
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RP+ +L + F AV+S HR +G++L + + S D ++ + E +
Sbjct: 19 RPIFFNLALIRFPANAVVSALHRISGVILLFFIPVVVYLLDFSLRDKESFVWVTEFFSSL 78
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKE 546
P L ++ L +H GIR L +D G +K+
Sbjct: 79 PVR--LVGIVALWALLHHIFAGIRFLLFDIHMGKIVKD 114
>UniRef50_Q31E02 Cluster: Succinate dehydrogenase, cytochrome b
subunit; n=1; Thiomicrospira crunogena XCL-2|Rep:
Succinate dehydrogenase, cytochrome b subunit -
Thiomicrospira crunogena (strain XCL-2)
Length = 131
Score = 35.5 bits (78), Expect = 1.1
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 NRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNL 429
NRP+ +L + F L A+LSI HR TG++L + +G + I + +E +
Sbjct: 7 NRPVYLNLFKFHFPLNAILSILHRITGVLLVL---SFVLGLVWLHGMILQPESYVENRQI 63
Query: 430 SPATL-FLAKVIIAAPLGYHFANGIRHL 510
+ L + L +H+ +G+RHL
Sbjct: 64 LTHPIGQLVLTLGGLSLWFHWLSGLRHL 91
>UniRef50_Q1GNN8 Cluster: Succinate dehydrogenase, cytochrome b
subunit; n=5; Sphingomonadales|Rep: Succinate
dehydrogenase, cytochrome b subunit - Sphingopyxis
alaskensis (Sphingomonas alaskensis)
Length = 147
Score = 35.1 bits (77), Expect = 1.5
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 11/108 (10%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASAL---GIGALVSQND-ISHYITMI-- 414
RP SPHL +Y + +SI HR +G L + + +GAL + D + ++ +
Sbjct: 9 RPRSPHLQVYKWTPAMAVSIFHRVSGDGLAIVGAGMFLWWLGALAAGPDAYAAFVACVWH 68
Query: 415 --EGLNLSPATLFLAKVIIAA---PLGYHFANGIRHLYWDTAKGLSIK 543
+ T L K+++ H +G+RH D G ++
Sbjct: 69 DPDAGTFHQVTNILGKIVLIGLTWAFFQHLFSGLRHFVLDAGAGYELR 116
>UniRef50_A0Q8D2 Cluster: Succinate dehydrogenase, cytochrome b556;
n=10; Francisella tularensis|Rep: Succinate
dehydrogenase, cytochrome b556 - Francisella tularensis
subsp. novicida (strain U112)
Length = 157
Score = 35.1 bits (77), Expect = 1.5
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +1
Query: 280 YSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKV 459
Y+F +TA+ SI HR +G++L + + Y + L S ++F
Sbjct: 46 YNFPITAISSIMHRISGVVLIIAIPLCVVAMNYALAGPDGYQQTVTVLTKSWFSVFF--W 103
Query: 460 IIAAPLGYHFANGIRHLYWDTAKGLSIK 543
+ + + YH GIRH+ D G S+K
Sbjct: 104 LFLSSITYHVYAGIRHMIMDMGFGESMK 131
>UniRef50_A0YD91 Cluster: Succinate dehydrogenase; n=5;
Gammaproteobacteria|Rep: Succinate dehydrogenase -
marine gamma proteobacterium HTCC2143
Length = 137
Score = 34.7 bits (76), Expect = 2.0
Identities = 25/97 (25%), Positives = 43/97 (44%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
RP++ L + L A+ SITHR +G++L +A+ + L + + S
Sbjct: 17 RPVNLDLGAMKWPLPAITSITHRISGVILVA-GTAVLLWLLDESLTSEEAFNSLRSVLAS 75
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIK 543
L + + L YH G++HL D G S++
Sbjct: 76 SLIFKLIVWGVMSALIYHSVAGVKHLCMDLGYGESLE 112
>UniRef50_UPI0000DAE349 Cluster: hypothetical protein
Rgryl_01000070; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000070 - Rickettsiella
grylli
Length = 107
Score = 34.3 bits (75), Expect = 2.6
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 292 LTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKVIIAA 471
+TA++SI HR +G +L + ++ + T+ LFL + A
Sbjct: 1 MTAIVSILHRLSGFLLFLAIPVFLMLMTLTLQSPEAFFTVHVCFEHPLMKLFLLGFLAA- 59
Query: 472 PLGYHFANGIRHLYWDTAKGLSIKEV-YSTGYAM 570
L YH GIRHL+ D ++K ++ G+ M
Sbjct: 60 -LFYHLFAGIRHLFMDAGVADTLKSAQWTAGFVM 92
>UniRef50_Q7VR95 Cluster: Succinate dehydrogenase cytochrome b-556
subunit; n=2; Candidatus Blochmannia|Rep: Succinate
dehydrogenase cytochrome b-556 subunit - Blochmannia
floridanus
Length = 131
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/103 (23%), Positives = 43/103 (41%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIEGLNLS 432
+P+ ++ F +TA+ SI HR +G +L + +S + I ++ + L +
Sbjct: 7 KPIYLNIKAIKFPITAIASILHRISGFILFIMIGPILWILKLSLSSIENFTKINTFLTVD 66
Query: 433 PATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTG 561
+ II YH G+R + D IK+ S G
Sbjct: 67 NYCFLFIRWIIIIIFSYHIVFGVRQILMDCG---FIKQTLSMG 106
>UniRef50_A6GWN2 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium psychrophilum JIP02/86|Rep: Putative
uncharacterized protein - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 1418
Score = 34.3 bits (75), Expect = 2.6
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Frame = +1
Query: 64 DNMALFSCTRLGSRSVLASLSRFPARLNS----VNYAQAASNAPKITFVKFEPPKEEHHD 231
DN+ + SRS+ + + + LN + Q AS KI V F PK++ +
Sbjct: 42 DNLVDIVDDKYLSRSIYSECKDYTSELNYNDAFIKLPQIASTHNKIDLVLFISPKKDFSN 101
Query: 232 VRNAKLNRPLSPHLTIYSFQLTAVLSITH 318
+ N+P LT +F++T + TH
Sbjct: 102 IFEETRNKPFLESLTHSNFKVTILSPETH 130
>UniRef50_P51055 Cluster: Succinate dehydrogenase cytochrome b556
subunit; n=3; Coxiella burnetii|Rep: Succinate
dehydrogenase cytochrome b556 subunit - Coxiella
burnetii
Length = 125
Score = 34.3 bits (75), Expect = 2.6
Identities = 33/111 (29%), Positives = 48/111 (43%)
Frame = +1
Query: 238 NAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYITMIE 417
NAK RP++ LT + F A+LSI HR +G +L L L + +
Sbjct: 2 NAK--RPVNLDLTKFHFPPMAILSIGHRISGFVL-FLCMPLMFYLLHRATASAESFYHLH 58
Query: 418 GLNLSPATLFLAKVIIAAPLGYHFANGIRHLYWDTAKGLSIKEVYSTGYAM 570
L L + LA I+ + +H GIRHL D S+ E + Y +
Sbjct: 59 QLLLHNGWIKLAVWIMLSATLFHLFAGIRHLAMDLGFWESVPEGRISAYTV 109
>UniRef50_Q9LPW9 Cluster: F13K23.5 protein; n=3; Arabidopsis
thaliana|Rep: F13K23.5 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 775
Score = 33.9 bits (74), Expect = 3.4
Identities = 42/154 (27%), Positives = 60/154 (38%)
Frame = +1
Query: 10 PDSLSDSVKTTTIHTV*SDNMALFSCTRLGSRSVLASLSRFPARLNSVNYAQAASNAPKI 189
PDS DS TTI+ S +M L + R LS F + VN A N+ K+
Sbjct: 497 PDSSLDSEVATTINGEVSSDMKLEDLLMVYDREKQKFLSSFVGQKIKVNVVMANRNSRKL 556
Query: 190 TFVKFEPPKEEHHDVRNAKLNRPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIG 369
F P+E +V R L L + + IT+ + G+
Sbjct: 557 IFSM--RPRENEEEVEK---KRTLMAKLRVGDVVKCCIKKITY------FGIFCELEGVP 605
Query: 370 ALVSQNDISHYITMIEGLNLSPATLFLAKVIIAA 471
ALV Q+++S T L PA+ F I+ A
Sbjct: 606 ALVHQSEVSWDAT------LDPASYFKIGQIVEA 633
>UniRef50_UPI0000F1ED4F Cluster: PREDICTED: similar to pol
polyprotein; n=21; Danio rerio|Rep: PREDICTED: similar
to pol polyprotein - Danio rerio
Length = 1473
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/52 (26%), Positives = 32/52 (61%)
Frame = +1
Query: 253 RPLSPHLTIYSFQLTAVLSITHRATGMMLTTYASALGIGALVSQNDISHYIT 408
RP+ P ++++SF + + +T T ++LTT++S++ AL+ ++I+
Sbjct: 271 RPMRPSVSVFSFDIEKMNPLT---TKVLLTTHSSSVSATALIDSGSAGNFIS 319
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,487,792
Number of Sequences: 1657284
Number of extensions: 11167188
Number of successful extensions: 25343
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 24430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25263
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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