Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28c04
(647 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 28 0.058
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.2
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.9
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 5.0
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 6.6
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 6.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 6.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.7
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 28.3 bits (60), Expect = 0.058
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +1
Query: 118 SLSRFPARLNSVNYAQAASNAPKITFVKFEPPKEE 222
SL RF +VNY Q S KI+ +K PP EE
Sbjct: 9 SLERF-CTYGNVNYRQRRSQPLKISCLKTTPPPEE 42
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 334 MLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKV 459
+L Y + I +S I + I ++ G + P T+FL V
Sbjct: 631 LLMDYEHTVKINENISMPYIGYQIILMIGTVIGPGTIFLMLV 672
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.9
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 334 MLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKV 459
+L Y + I +S I + I ++ G + P T+FL V
Sbjct: 864 LLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTIFLMLV 905
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.6 bits (46), Expect = 2.9
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 334 MLTTYASALGIGALVSQNDISHYITMIEGLNLSPATLFLAKV 459
+L Y + I +S I + I ++ G + P T+FL V
Sbjct: 864 LLMDYEHTVKINENISMLYIGYQIILMIGTVIGPGTIFLMLV 905
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +2
Query: 497 ELDICIGTQPKDCRSKKCI 553
E+D+ + + ++CR KKC+
Sbjct: 231 EIDMYMRRKCQECRLKKCL 249
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 519 HSQRIVDQRSVFYRICHVGG 578
+S++ + S FY+IC++ G
Sbjct: 6 YSKKDIRSLSFFYKICNIFG 25
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = +3
Query: 519 HSQRIVDQRSVFYRICHVGG 578
+S++ + S FY+IC++ G
Sbjct: 6 YSKKDIRSLSFFYKICNIFG 25
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/23 (30%), Positives = 11/23 (47%)
Frame = -1
Query: 395 EISFCDTNAPIPSALAYVVNIIP 327
E C N P+P + ++N P
Sbjct: 399 EAKHCGVNVPVPPMQSQIINPQP 421
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 376 VSQNDISHYITMIEGLNLSPATLFLAKV 459
+S I + I ++ G L P T+FL V
Sbjct: 905 ISMPYIGYQILLMGGTILGPGTIFLMLV 932
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 376 VSQNDISHYITMIEGLNLSPATLFLAKV 459
+S I + I ++ G L P T+FL V
Sbjct: 905 ISMPYIGYQILLMGGTILGPGTIFLMLV 932
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 376 VSQNDISHYITMIEGLNLSPATLFLAKV 459
+S I + I ++ G L P T+FL V
Sbjct: 905 ISMPYIGYQILLMGGTILGPGTIFLMLV 932
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 376 VSQNDISHYITMIEGLNLSPATLFLAKV 459
+S I + I ++ G L P T+FL V
Sbjct: 905 ISMPYIGYQILLMGGTILGPGTIFLMLV 932
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,413
Number of Sequences: 336
Number of extensions: 3218
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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