Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28b19
         (313 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep: ...    39   0.025
UniRef50_Q94MW9 Cluster: Host specificity protein; n=1; Streptoc...    33   1.2  
UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Re...    31   5.0  
UniRef50_Q6E787 Cluster: Putative uncharacterized protein orf273...    31   5.0  
UniRef50_O55709 Cluster: 069L; n=1; Invertebrate iridescent viru...    31   6.6  
UniRef50_Q8IBL4 Cluster: Putative uncharacterized protein MAL7P1...    31   6.6  
UniRef50_A7TFQ4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  

>UniRef50_Q0N3Z7 Cluster: BRO-B; n=13; Nucleopolyhedrovirus|Rep:
           BRO-B - Clanis bilineata nucleopolyhedrosis virus
          Length = 339

 Score = 38.7 bits (86), Expect = 0.025
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 270 QYTKKAINDHVNDKYKTTYEKG 205
           Q TKKA+ DHV++KYK+TYE G
Sbjct: 42  QNTKKAVKDHVDEKYKSTYEMG 63


>UniRef50_Q94MW9 Cluster: Host specificity protein; n=1;
           Streptococcus phage DT2|Rep: Host specificity protein -
           Streptococcus phage DT2
          Length = 1271

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -1

Query: 208 GSTPYTHAPDSVVKRGNDKYKTTYEQTRLGDGSTSKMMS 92
           G TPY H   S    G D++ T Y    L DG++ K  S
Sbjct: 578 GKTPYFHTAWSYSADGKDRFTTVYPNLNLFDGTSDKTSS 616


>UniRef50_A1YJ59 Cluster: BRO; n=1; Spodoptera frugiperda MNPV|Rep:
           BRO - Spodoptera frugiperda nuclear polyhedrosis virus
           (SfNPV)
          Length = 334

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -2

Query: 273 FQYTKKAINDHVNDKYKTTY 214
           ++ TKKAI DHV+DKYK  +
Sbjct: 41  YENTKKAIIDHVDDKYKIAF 60


>UniRef50_Q6E787 Cluster: Putative uncharacterized protein orf273;
           n=1; Saprolegnia ferax|Rep: Putative uncharacterized
           protein orf273 - Saprolegnia ferax
          Length = 273

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = -2

Query: 312 FFFKKYSHFI*HNFQYTKKAINDHVNDKYKTTYEKGLR-HIPMLQT 178
           F FKK++      F+ TK  I ++ NDK+K  Y+K ++ ++P +++
Sbjct: 115 FIFKKFNK---RKFKITKFIIKNNTNDKFKIYYKKKIKINLPYIKS 157


>UniRef50_O55709 Cluster: 069L; n=1; Invertebrate iridescent virus
           6|Rep: 069L - Chilo iridescent virus (CIV) (Insect
           iridescent virus type 6)
          Length = 230

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 312 FFFKKYSHFI*HNFQYTKKAINDHVNDKYKTTYEKGL 202
           FF K+ + F+   F+  K A+  HV  KYKTT  K L
Sbjct: 44  FFGKEIAEFL--GFKKPKDALQKHVKPKYKTTLSKVL 78


>UniRef50_Q8IBL4 Cluster: Putative uncharacterized protein
           MAL7P1.126; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.126 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1222

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 279 HNFQYTKKAINDHVNDKYKTTYEKGL--RHIP 190
           +NF Y K  ++ H N+     Y KGL  +HIP
Sbjct: 482 YNFSYQKNNLSSHNNNNNNNNYSKGLYSKHIP 513


>UniRef50_A7TFQ4 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 310

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 115 RRQDGSAHMSFCICHCLFSRRCLEHGYM 198
           RR  GS H  FC C CLF++  L++  M
Sbjct: 115 RRVKGSKHQLFCQCLCLFTKLFLDNKSM 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,031,888
Number of Sequences: 1657284
Number of extensions: 4746627
Number of successful extensions: 10936
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10932
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)