Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28b19
         (313 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3287|AAF46769.2|  397|Drosophila melanogaster CG4372-PA...    28   2.1  
BT023905-1|ABA81839.1| 2753|Drosophila melanogaster GH18167p pro...    26   8.5  
BT015176-1|AAT94405.1|  857|Drosophila melanogaster SD15071p pro...    26   8.5  
AJ544075-1|CAD66435.1| 2935|Drosophila melanogaster zormin protein.    26   8.5  
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD...    26   8.5  
AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB...    26   8.5  
AE014296-408|AAF47606.3| 2946|Drosophila melanogaster CG33484-PA...    26   8.5  
AE014296-407|ABI31229.1| 2947|Drosophila melanogaster CG33484-PC...    26   8.5  

>AE013599-3287|AAF46769.2|  397|Drosophila melanogaster CG4372-PA
           protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 2.1
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -3

Query: 296 IVILFNTISNIPKKQLTITSMTNTKRRMKRV 204
           +++LF TI ++PKK L     TN K R +R+
Sbjct: 13  LLLLFTTIGSVPKKSLKY--FTNRKLRERRI 41


>BT023905-1|ABA81839.1| 2753|Drosophila melanogaster GH18167p protein.
          Length = 2753

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 270  QYTKKAINDHVNDKYKTTYEKGLRHIPMLQT 178
            ++ K  I+   N  YKTT++KG+  + + +T
Sbjct: 1216 EWFKDGISIQTNSDYKTTFDKGICRLVIEET 1246


>BT015176-1|AAT94405.1|  857|Drosophila melanogaster SD15071p
           protein.
          Length = 857

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 187 APDSVVKRGNDKYKTTYEQTR 125
           APD V  R ND +K  Y +TR
Sbjct: 796 APDDVYFRANDTHKPFYRKTR 816


>AJ544075-1|CAD66435.1| 2935|Drosophila melanogaster zormin protein.
          Length = 2935

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 270  QYTKKAINDHVNDKYKTTYEKGLRHIPMLQT 178
            ++ K  I+   N  YKTT++KG+  + + +T
Sbjct: 1398 EWFKDGISIQTNSDYKTTFDKGICRLVIEET 1428


>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
            isoform D protein.
          Length = 3651

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 270  QYTKKAINDHVNDKYKTTYEKGLRHIPMLQT 178
            ++ K  I+   N  YKTT++KG+  + + +T
Sbjct: 1409 EWFKDGISIQTNSDYKTTFDKGICRLVIEET 1439


>AE014296-409|ABI31228.1| 3090|Drosophila melanogaster CG33484-PB,
            isoform B protein.
          Length = 3090

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 270  QYTKKAINDHVNDKYKTTYEKGLRHIPMLQT 178
            ++ K  I+   N  YKTT++KG+  + + +T
Sbjct: 1409 EWFKDGISIQTNSDYKTTFDKGICRLVIEET 1439


>AE014296-408|AAF47606.3| 2946|Drosophila melanogaster CG33484-PA,
            isoform A protein.
          Length = 2946

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 270  QYTKKAINDHVNDKYKTTYEKGLRHIPMLQT 178
            ++ K  I+   N  YKTT++KG+  + + +T
Sbjct: 1409 EWFKDGISIQTNSDYKTTFDKGICRLVIEET 1439


>AE014296-407|ABI31229.1| 2947|Drosophila melanogaster CG33484-PC,
            isoform C protein.
          Length = 2947

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 270  QYTKKAINDHVNDKYKTTYEKGLRHIPMLQT 178
            ++ K  I+   N  YKTT++KG+  + + +T
Sbjct: 1409 EWFKDGISIQTNSDYKTTFDKGICRLVIEET 1439


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,242,877
Number of Sequences: 53049
Number of extensions: 206090
Number of successful extensions: 458
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 458
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)