Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28b06
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   1.3  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   1.3  
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    25   3.1  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    25   3.1  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    23   7.2  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   7.2  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   7.2  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   9.5  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 500 AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 592
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 118 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 148


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 500 AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 592
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 119 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 149


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 323 VFCIHCVLERVDG 285
           +FC+ C++E +DG
Sbjct: 13  LFCVQCLIEHIDG 25


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 323 VFCIHCVLERVDG 285
           +FC+ C++E +DG
Sbjct: 13  LFCVQCLIEHIDG 25


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 619 LLQQIQHGPANCYCKFLGKKEH*LYPQRNAC 711
           LL+Q+ HG  +  C  + +K     P R AC
Sbjct: 170 LLRQLNHGGDHAECGQVERKSQPFGPARWAC 200


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 198 TMPPKNCTHLGG 233
           TMPPK C+H  G
Sbjct: 556 TMPPKGCSHDDG 567


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 415 NVLSVRCVFITNELPGCWALKKYIIKN 495
           +V +VRC      +P   A+KK++I+N
Sbjct: 16  HVKAVRCTNCARCVPKDKAIKKFVIRN 42


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 537 TMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 442
           TM DF      P C+LD I +     W   C+
Sbjct: 150 TMVDFKLLQVIPYCVLDTITYMMGGYWYMACE 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,232
Number of Sequences: 2352
Number of extensions: 15951
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)