Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28b01
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal...    25   3.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   3.1  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   3.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   3.1  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   4.1  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       24   4.1  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       24   4.1  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   9.5  

>AJ304406-1|CAC35454.1|  131|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 131

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 192 TNRNIVVPANN*EQYKNLKFYTTN 121
           TN  + VPAN    YKNL+   TN
Sbjct: 44  TNGRMSVPANREYHYKNLRDRYTN 67


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 192 TNRNIVVPANN*EQYKNLKFYTTN 121
           TN  + VPAN    YKNL+   TN
Sbjct: 4   TNGRMSVPANREYHYKNLRDRYTN 27


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 600 LEYEFDDDAPDD 635
           +EYEFDDD P D
Sbjct: 88  VEYEFDDDLPFD 99


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 582  ILARIRLEYEFDDDAPDDAQLNVMCN 659
            +L R+RLE +   D   +  +N+MC+
Sbjct: 940  LLTRLRLEQDLQADFDVENAINIMCS 965


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 600 LEYEFDDDAPDD 635
           +EYEFDDD P D
Sbjct: 318 VEYEFDDDFPFD 329


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 600 LEYEFDDDAPDD 635
           +EYEFDDD P D
Sbjct: 88  VEYEFDDDFPFD 99


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 600 LEYEFDDDAPDD 635
           +EYEFDDD P D
Sbjct: 88  VEYEFDDDFPFD 99


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 225 IQSACNNIISSVKKTNSKHKKFVYWPKDTNALVPLVWRES 344
           I S+C  I  S K  ++ HK FV   + T +     W+++
Sbjct: 37  INSSCAQINESDKANDTNHKVFVQLNELTGSGENQEWKQT 76


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,671
Number of Sequences: 2352
Number of extensions: 14155
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)