Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28b01
(713 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 33 0.39
AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH0352... 30 3.6
AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,... 30 3.6
AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,... 30 3.6
AE014134-3221|AAF45446.1| 134|Drosophila melanogaster CG17570-P... 29 4.7
U15004-1|AAC46492.1| 631|Drosophila melanogaster IRBP protein. 29 6.3
BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro... 29 6.3
AY071244-1|AAL48866.1| 535|Drosophila melanogaster RE28533p pro... 29 6.3
AY069152-1|AAL39297.1| 595|Drosophila melanogaster GH17087p pro... 29 6.3
AY051431-1|AAK92855.1| 456|Drosophila melanogaster GH10642p pro... 29 6.3
AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy... 29 6.3
AE014298-633|AAF45949.1| 595|Drosophila melanogaster CG3556-PA ... 29 6.3
AE014297-1290|AAF54631.1| 631|Drosophila melanogaster CG5247-PA... 29 6.3
AE013599-934|AAM68799.1| 456|Drosophila melanogaster CG1623-PE,... 29 6.3
AE013599-933|AAM68798.1| 456|Drosophila melanogaster CG1623-PD,... 29 6.3
AE013599-932|AAM68797.1| 456|Drosophila melanogaster CG1623-PC,... 29 6.3
AE013599-931|AAM68796.1| 456|Drosophila melanogaster CG1623-PB,... 29 6.3
AE013599-930|AAF58896.1| 456|Drosophila melanogaster CG1623-PA,... 29 6.3
U05208-1|AAA20644.1| 631|Drosophila melanogaster yolk protein f... 29 8.3
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 33.1 bits (72), Expect = 0.39
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Frame = +3
Query: 213 TRIPIQSACNNIISSVKKTNSKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSK 392
T+ Q N+IS +K + + + V + K + + + K I + Y+TL+H +K
Sbjct: 582 TQHSAQEDNQNLISLTEKAVNNYNRQVIFTKGPEKVKQENYYKKKIIHISYETLTHKKAK 641
Query: 393 --IIKVYVYQHDKIEI----KFEHVYFSKSDIDLFDSTMANKISKLLTLLENGNASSE 548
+I +V H + I FE + + +I + ST K+ + LTLL+N + +E
Sbjct: 642 QYLIDYFVNNHSALYIDSDADFETIQAAHKEI-INPST--TKVIRSLTLLKNIKSYAE 696
>AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH03529
protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +3
Query: 96 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 233
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 452 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 503
>AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,
isoform B protein.
Length = 881
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +3
Query: 96 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 233
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 739 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 790
>AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,
isoform A protein.
Length = 594
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Frame = +3
Query: 96 SYSINFSQDLLYKILN----SYIVPNYSLAQQ--YFDLYDENGFRTRIPIQS 233
SYSIN++ DLL K LN + IV N SL ++ Y ++ + G++ + I S
Sbjct: 452 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEHVYDEIKHKEGYKDPVKIYS 503
>AE014134-3221|AAF45446.1| 134|Drosophila melanogaster CG17570-PA
protein.
Length = 134
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 249 ISSVKKTNSKHKKFVYWPKDTNALVPLVWRESKEIKLPYKTLSHNLSKIIKVYVYQHDKI 428
IS+ KKT S+ K V+ K + ++WRE + + L H +++++ +Q +
Sbjct: 46 ISNYKKTPSERKTLVFIAKKW-LHIQMLWREFRLRDKQIRRLGHKDARVLEHGYFQQELF 104
Query: 429 EIKFE 443
E+ E
Sbjct: 105 ELVHE 109
>U15004-1|AAC46492.1| 631|Drosophila melanogaster IRBP protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 87 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 257
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 240 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 299
Query: 258 VKKTNSKHKK 287
+ + +K
Sbjct: 300 KRVITVQKQK 309
>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p protein.
Length = 1031
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = +3
Query: 96 SYSINFSQDLLYKILN----SYIVPNYSLAQQYFDLYDE 200
SYSIN++ DLL K LN + IV N SL +++ +YDE
Sbjct: 900 SYSINYNHDLLTKNLNADRTNPIVYNESLKEEH--VYDE 936
>AY071244-1|AAL48866.1| 535|Drosophila melanogaster RE28533p
protein.
Length = 535
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 87 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 257
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 144 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 203
Query: 258 VKKTNSKHKK 287
+ + +K
Sbjct: 204 KRVITVQKQK 213
>AY069152-1|AAL39297.1| 595|Drosophila melanogaster GH17087p
protein.
Length = 595
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 456 SKSDIDLFDSTMANKISKLLTLLENGNASSETLQNSQVGSDE 581
S S I + ST ++ ++ + T LEN ASS L + SDE
Sbjct: 39 STSPISVSFSTTSSVVAPISTELENQTASSSNLNTNNEASDE 80
>AY051431-1|AAK92855.1| 456|Drosophila melanogaster GH10642p
protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 132 KILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNS---KHKKFVYWP 302
K+L S+ PN+++A+ DENG + Q + NN ++ K NS +KF+
Sbjct: 31 KLLISHGKPNFTIAKS--PKIDENGNGNPLSAQPSANNNYNAYKSANSSVANSQKFIVGT 88
Query: 303 KDTNALVP 326
K P
Sbjct: 89 KFNGVFKP 96
>AF210453-1|AAF21041.1| 4559|Drosophila melanogaster dynein heavy
chain protein.
Length = 4559
Score = 29.1 bits (62), Expect = 6.3
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = +3
Query: 30 H*RHIVAVINMDHGNFMIEKEI-----SYSINF-SQDLLYKILNSYIVPNYSLAQQYFD 188
H +IVA +N G+F I+ + S+++N SQD L+ ILNS + + Q FD
Sbjct: 2656 HKCNIVACMNPSAGSFTIDPRLQRHFCSFAVNPPSQDALFHILNSILSQHMDNPIQKFD 2714
>AE014298-633|AAF45949.1| 595|Drosophila melanogaster CG3556-PA
protein.
Length = 595
Score = 29.1 bits (62), Expect = 6.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 456 SKSDIDLFDSTMANKISKLLTLLENGNASSETLQNSQVGSDE 581
S S I + ST ++ ++ + T LEN ASS L + SDE
Sbjct: 39 STSPISVSFSTTSSVVAPISTELENQTASSSNLNTNNEASDE 80
>AE014297-1290|AAF54631.1| 631|Drosophila melanogaster CG5247-PA
protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 87 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 257
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 240 REILSDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 299
Query: 258 VKKTNSKHKK 287
+ + +K
Sbjct: 300 KRVITVQKQK 309
>AE013599-934|AAM68799.1| 456|Drosophila melanogaster CG1623-PE,
isoform E protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 132 KILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNS---KHKKFVYWP 302
K+L S+ PN+++A+ DENG + Q + NN ++ K NS +KF+
Sbjct: 31 KLLISHGKPNFTIAKS--PKIDENGNGNPLSAQPSANNNYNAYKSANSSVANSQKFIVGT 88
Query: 303 KDTNALVP 326
K P
Sbjct: 89 KFNGVFKP 96
>AE013599-933|AAM68798.1| 456|Drosophila melanogaster CG1623-PD,
isoform D protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 132 KILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNS---KHKKFVYWP 302
K+L S+ PN+++A+ DENG + Q + NN ++ K NS +KF+
Sbjct: 31 KLLISHGKPNFTIAKS--PKIDENGNGNPLSAQPSANNNYNAYKSANSSVANSQKFIVGT 88
Query: 303 KDTNALVP 326
K P
Sbjct: 89 KFNGVFKP 96
>AE013599-932|AAM68797.1| 456|Drosophila melanogaster CG1623-PC,
isoform C protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 132 KILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNS---KHKKFVYWP 302
K+L S+ PN+++A+ DENG + Q + NN ++ K NS +KF+
Sbjct: 31 KLLISHGKPNFTIAKS--PKIDENGNGNPLSAQPSANNNYNAYKSANSSVANSQKFIVGT 88
Query: 303 KDTNALVP 326
K P
Sbjct: 89 KFNGVFKP 96
>AE013599-931|AAM68796.1| 456|Drosophila melanogaster CG1623-PB,
isoform B protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 132 KILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNS---KHKKFVYWP 302
K+L S+ PN+++A+ DENG + Q + NN ++ K NS +KF+
Sbjct: 31 KLLISHGKPNFTIAKS--PKIDENGNGNPLSAQPSANNNYNAYKSANSSVANSQKFIVGT 88
Query: 303 KDTNALVP 326
K P
Sbjct: 89 KFNGVFKP 96
>AE013599-930|AAF58896.1| 456|Drosophila melanogaster CG1623-PA,
isoform A protein.
Length = 456
Score = 29.1 bits (62), Expect = 6.3
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +3
Query: 132 KILNSYIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISSVKKTNS---KHKKFVYWP 302
K+L S+ PN+++A+ DENG + Q + NN ++ K NS +KF+
Sbjct: 31 KLLISHGKPNFTIAKS--PKIDENGNGNPLSAQPSANNNYNAYKSANSSVANSQKFIVGT 88
Query: 303 KDTNALVP 326
K P
Sbjct: 89 KFNGVFKP 96
>U05208-1|AAA20644.1| 631|Drosophila melanogaster yolk protein
factor 1 beta subunit protein.
Length = 631
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 87 KEISYSINFSQDLLYKILNS---YIVPNYSLAQQYFDLYDENGFRTRIPIQSACNNIISS 257
+EI QD L + L Y+ PN S++ QY++ + + ++ I N+++ +
Sbjct: 240 REILPDRKLKQDFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRT 299
Query: 258 VKKTNSKHKK 287
+ + +K
Sbjct: 300 KRVITVQKQK 309
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,905,444
Number of Sequences: 53049
Number of extensions: 589031
Number of successful extensions: 1965
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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