Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28a21
(483 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VSC1 Cluster: Signal recognition particle 9 kDa prote... 95 1e-18
UniRef50_P49458 Cluster: Signal recognition particle 9 kDa prote... 83 2e-15
UniRef50_P34642 Cluster: Signal recognition particle 9 kDa prote... 78 1e-13
UniRef50_Q9SMU7 Cluster: Signal recognition particle 9 kDa prote... 69 6e-11
UniRef50_Q4N7J3 Cluster: Signal recognition particle, putative; ... 65 7e-10
UniRef50_Q55QP8 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q55GL2 Cluster: Signal recognition particle 9 kDa subun... 57 2e-07
UniRef50_A7ARX9 Cluster: Signal recognition particle SRP9 subuni... 56 3e-07
UniRef50_Q6NVX0 Cluster: SRP9 protein; n=7; Euteleostomi|Rep: SR... 54 2e-06
UniRef50_Q4PBZ7 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A2YBE3 Cluster: Putative uncharacterized protein; n=2; ... 44 0.001
UniRef50_Q8IBG9 Cluster: Signal recognition particle, putative; ... 44 0.001
UniRef50_A2DMD3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.068
UniRef50_A2GMB9 Cluster: Putative uncharacterized protein; n=3; ... 36 0.48
UniRef50_UPI0000499521 Cluster: hypothetical protein 188.t00016;... 36 0.63
UniRef50_UPI0000DAE870 Cluster: hypothetical protein Rgryl_01000... 34 1.9
UniRef50_Q86G52 Cluster: Metacaspase 2; n=11; Plasmodium (Vincke... 34 1.9
UniRef50_Q8EYZ1 Cluster: Putative uncharacterized protein; n=4; ... 33 2.6
UniRef50_Q6FL58 Cluster: Serine/threonine-protein kinase ATG1; n... 33 4.5
UniRef50_A7EZ34 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
>UniRef50_Q9VSC1 Cluster: Signal recognition particle 9 kDa protein
homolog; n=4; Diptera|Rep: Signal recognition particle 9
kDa protein homolog - Drosophila melanogaster (Fruit
fly)
Length = 77
Score = 94.7 bits (225), Expect = 1e-18
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
M FV NW++FE A E +YL +P N R ++KY+HSKG +K+TDN KC+QYK E D+R
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60
Query: 397 KIDKFMSNLLRHMAS 441
KI+K SNL+ HMAS
Sbjct: 61 KIEKITSNLVGHMAS 75
>UniRef50_P49458 Cluster: Signal recognition particle 9 kDa protein;
n=18; Coelomata|Rep: Signal recognition particle 9 kDa
protein - Homo sapiens (Human)
Length = 86
Score = 83.4 bits (197), Expect = 2e-15
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = +1
Query: 235 WEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKIDKFM 414
WEEF +AAE LYL DP+ R +KY HS G VK+TD+ CL YKT+ QDV+KI+KF
Sbjct: 7 WEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFH 66
Query: 415 SNLLRHMAS 441
S L+R M +
Sbjct: 67 SQLMRLMVA 75
>UniRef50_P34642 Cluster: Signal recognition particle 9 kDa protein
homolog; n=6; Bilateria|Rep: Signal recognition particle
9 kDa protein homolog - Caenorhabditis elegans
Length = 76
Score = 77.8 bits (183), Expect = 1e-13
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
MT+ +W+EF KAAE L+ +P R+ KY+H+KG +K+TD+ CLQY T QDV+
Sbjct: 1 MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVK 60
Query: 397 KIDKFMSNLLR 429
K++K S LLR
Sbjct: 61 KLEKLSSTLLR 71
>UniRef50_Q9SMU7 Cluster: Signal recognition particle 9 kDa protein;
n=7; Magnoliophyta|Rep: Signal recognition particle 9
kDa protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 68.9 bits (161), Expect = 6e-11
Identities = 28/74 (37%), Positives = 47/74 (63%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
M ++ +W+EF + L+ DP +TRY +KY H G +K+TDNK+CL++KT+ Q+ +
Sbjct: 1 MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60
Query: 397 KIDKFMSNLLRHMA 438
K++K + MA
Sbjct: 61 KMEKLNNIFFTLMA 74
>UniRef50_Q4N7J3 Cluster: Signal recognition particle, putative;
n=1; Theileria parva|Rep: Signal recognition particle,
putative - Theileria parva
Length = 105
Score = 65.3 bits (152), Expect = 7e-10
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
MT+ NW EF A +LY + P+ T+Y KY KG +K+TDNK+C +++ + + R
Sbjct: 1 MTYFDNWNEFLHEARLLYFRTPLKTKYVFKYIKGKGKITLKVTDNKQCCKFRVDPESSSR 60
Query: 397 KIDKFMSNLLRHMAS 441
I++F + L S
Sbjct: 61 LINQFNALFLNWSVS 75
>UniRef50_Q55QP8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 142
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
M ++ NW +FE AA LY + P RY VK+ G +KITD+ KC++YKT +
Sbjct: 1 MVYIKNWTDFEAAATDLYARSPNKVRYCVKFQPKTGHLVLKITDDLKCIKYKTFSSIILN 60
Query: 397 KIDKFMSNLLRHMAS 441
+ D LL M++
Sbjct: 61 RFDSLNLRLLSSMSN 75
>UniRef50_Q55GL2 Cluster: Signal recognition particle 9 kDa subunit;
n=1; Dictyostelium discoideum AX4|Rep: Signal
recognition particle 9 kDa subunit - Dictyostelium
discoideum AX4
Length = 75
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/69 (33%), Positives = 43/69 (62%)
Frame = +1
Query: 223 FVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKI 402
++ +W+EF +E LY DP TR+S K+ H +G +K+T++ L+++T+ + D ++I
Sbjct: 2 YIEDWDEFYDKSEQLYRTDPKRTRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKRI 61
Query: 403 DKFMSNLLR 429
D+ S R
Sbjct: 62 DQINSLFFR 70
>UniRef50_A7ARX9 Cluster: Signal recognition particle SRP9 subunit,
putative; n=1; Babesia bovis|Rep: Signal recognition
particle SRP9 subunit, putative - Babesia bovis
Length = 102
Score = 56.4 bits (130), Expect = 3e-07
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
MT+ W F +AA L+L P+ TRYSVKY + +K+TD++KC ++K ++R
Sbjct: 1 MTYYDTWNGFIQAAHTLFLAQPLKTRYSVKYVKGTESIVLKVTDDRKCCKFKLAKSGNLR 60
Query: 397 KIDK 408
++++
Sbjct: 61 QLNQ 64
>UniRef50_Q6NVX0 Cluster: SRP9 protein; n=7; Euteleostomi|Rep: SRP9
protein - Homo sapiens (Human)
Length = 82
Score = 53.6 bits (123), Expect = 2e-06
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 235 WEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDN--KKCLQYKTEVQ 384
WEEF +AAE LYL DP+ R +KY HS G VK+TD+ ++CL +Q
Sbjct: 7 WEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVRQCLALLLRLQ 58
>UniRef50_Q4PBZ7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 145
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/74 (27%), Positives = 42/74 (56%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
M ++ +W EF++ + LY Q+P +RY +K S + +K+TD+ ++Y+T +
Sbjct: 1 MVYIKDWPEFQQRSIKLYRQNPHKSRYLIKSRPSTHSLTLKVTDDTTTIKYRTRSSAILG 60
Query: 397 KIDKFMSNLLRHMA 438
+++ F ++ MA
Sbjct: 61 RLEVFNKAMMLAMA 74
>UniRef50_A2YBE3 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 81
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQY 369
M + +W+EF + L+ P TRY VKY H +G +K+TDN + + +
Sbjct: 1 MVYFDSWDEFVSKSVELFRNHPDTTRYVVKYRHCEGKLVLKVTDNHENIHW 51
>UniRef50_Q8IBG9 Cluster: Signal recognition particle, putative;
n=3; Plasmodium|Rep: Signal recognition particle,
putative - Plasmodium falciparum (isolate 3D7)
Length = 109
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +1
Query: 214 VMTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDV 393
++ + +W +F + + P TRY +K VK+TDN + YK + ++
Sbjct: 6 ILVYAESWNDFIHTTRNIISKSPDKTRYVIKLHRPSETIIVKVTDNNNSIMYKLDKNDNM 65
Query: 394 RKIDKFMSNLL 426
+KI++ S L
Sbjct: 66 KKIEELNSLFL 76
>UniRef50_A2DMD3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 106
Score = 38.7 bits (86), Expect = 0.068
Identities = 20/75 (26%), Positives = 37/75 (49%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVR 396
M + + + FE+ A+ + DP TR + KY F +KI + K + E + D +
Sbjct: 28 MVLLTDIKVFEEKAKEMIQADPKKTRLTTKYKKDSHIFVMKIFNGKDAYKINIEKENDFK 87
Query: 397 KIDKFMSNLLRHMAS 441
+ + +S+LL M +
Sbjct: 88 ESQRIISSLLHLMTN 102
>UniRef50_A2GMB9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 494
Score = 35.9 bits (79), Expect = 0.48
Identities = 24/65 (36%), Positives = 34/65 (52%)
Frame = -2
Query: 410 NLSIFLTSCCTSVLY*RHFLLSVILTLNAPFECEYLTLYRVFIGSCRYNISAAFSNSSQF 231
NL FL TS Y + F SV N P CEYL + V I + N +AF +++Q+
Sbjct: 260 NLQAFLVYLDTSKNYKKCFPFSV--RFNFPSLCEYLISHGVDINTRDKNYYSAFFHAAQY 317
Query: 230 GTKVI 216
G ++I
Sbjct: 318 GNRLI 322
>UniRef50_UPI0000499521 Cluster: hypothetical protein 188.t00016;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 188.t00016 - Entamoeba histolytica HM-1:IMSS
Length = 78
Score = 35.5 bits (78), Expect = 0.63
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 226 VPNWEEFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKID 405
V + +F + AE L+ + NTRY +KY +K+TDN K Y + ++++ +
Sbjct: 3 VESLAKFREYAEALFRANQ-NTRYFMKYRDDDLIITLKVTDNVKTYTYDIKDRKEMNAVT 61
Query: 406 KFMSNLLRHMA 438
+ ++ +M+
Sbjct: 62 ELNMKMMSYMS 72
>UniRef50_UPI0000DAE870 Cluster: hypothetical protein Rgryl_01000560;
n=4; Rickettsiella grylli|Rep: hypothetical protein
Rgryl_01000560 - Rickettsiella grylli
Length = 4172
Score = 33.9 bits (74), Expect = 1.9
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +1
Query: 217 MTFVPNWEEFEKAAEMLYLQ-DPINTRYSVKYS-HSKGAFNVK-ITDNKK 357
++ V W+EF K E L LQ DPI YSV S HS G + +K +T +KK
Sbjct: 2604 LSAVELWDEFGKR-ETLELQIDPITHTYSVDLSHHSSGVYQLKPLTQDKK 2652
>UniRef50_Q86G52 Cluster: Metacaspase 2; n=11; Plasmodium
(Vinckeia)|Rep: Metacaspase 2 - Plasmodium berghei
Length = 1454
Score = 33.9 bits (74), Expect = 1.9
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 165 NM*VLNNTLYTHGAH--TNYRLDIRLNYNQGILI 70
N+ NNTLY +G H NY D+ YNQG+ I
Sbjct: 143 NLNTKNNTLYNYGNHIYNNYNGDVLYQYNQGVNI 176
>UniRef50_Q8EYZ1 Cluster: Putative uncharacterized protein; n=4;
Leptospira|Rep: Putative uncharacterized protein -
Leptospira interrogans
Length = 371
Score = 33.5 bits (73), Expect = 2.6
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 283 INTRYSVK-YSHSKGAFNVKITDNKKCLQYK-TEVQQDVRKIDKFMS 417
+ +SVK S KG F++KI +N+ L + E+QQDV I F+S
Sbjct: 106 VTKEFSVKELSAEKGKFDLKIENNRMSLNSEGIEIQQDVENIKLFLS 152
>UniRef50_Q6FL58 Cluster: Serine/threonine-protein kinase ATG1; n=1;
Candida glabrata|Rep: Serine/threonine-protein kinase
ATG1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 942
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/62 (20%), Positives = 33/62 (53%)
Frame = +1
Query: 241 EFEKAAEMLYLQDPINTRYSVKYSHSKGAFNVKITDNKKCLQYKTEVQQDVRKIDKFMSN 420
+ +K L + +NTRY ++ S+ ++N + + NK+ + ++ + ++ + + S
Sbjct: 681 DVQKNLSNTLLSETVNTRYRLRNDSSRNSYNKRNSFNKERFSFSSQGSNNSKRTNSYSST 740
Query: 421 LL 426
LL
Sbjct: 741 LL 742
>UniRef50_A7EZ34 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 433
Score = 31.9 bits (69), Expect = 7.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 235 WEEFEKAAEMLYLQDPINTRYSVKY--SHSKGAFNVKITD 348
WE FE L Q P N +Y V Y H +G N+K T+
Sbjct: 62 WERFENHIVKLNNQTPANVQYKVLYLGRHGEGYHNIKETE 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,270,728
Number of Sequences: 1657284
Number of extensions: 7761016
Number of successful extensions: 18429
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 17935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18419
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27710252790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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