Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28a19
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    28   0.36 
AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    25   1.9  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    25   1.9  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   7.8  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 22/64 (34%), Positives = 29/64 (45%)
 Frame = -2

Query: 455 CFS*YSYINVFQF*CSDNAIQLRLPFPLQICSGIHILASMDSPNHF*YKMGNASHVLLS* 276
           C S   Y+N F   CS N ++L  P    + S  H L    SP  F Y + N+S   +  
Sbjct: 718 CMSLQHYLNAFVHWCSSNLLRL-CPDKCSVISFSHSL----SPISFNYTLSNSSLSRVLS 772

Query: 275 ISDL 264
           I DL
Sbjct: 773 IRDL 776


>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 432 DIGILRKTNPLTTPVST*NYSLILEVDCIHVLVIANC 542
           D+   +K  P  T V     S +  VDCIH  V ++C
Sbjct: 140 DVADQKKATPKGTQVCNPEASFL--VDCIHTTVFSDC 174


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 432 DIGILRKTNPLTTPVST*NYSLILEVDCIHVLVIANC 542
           D+   +K  P  T V     S +  VDCIH  V ++C
Sbjct: 137 DVADQKKATPKGTQVCNPEASFL--VDCIHTTVFSDC 171


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 356 CHYISEVEMEVVIVLHYR 409
           C+Y+SE EME + +L  R
Sbjct: 91  CYYVSESEMEKIEMLFAR 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,883
Number of Sequences: 2352
Number of extensions: 13136
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)