Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28a18
         (727 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    28   0.34 
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    25   3.2  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   4.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.5  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    24   5.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.6  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   9.6  

>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 147 RVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAIS 299
           ++K S+P     K S T  P+S    P   C  G     T  G+S S  +S
Sbjct: 309 KLKLSLPYVEREKCSKTFRPWSFALGPGQMCAGGERAKDTCAGDSGSPLMS 359


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 234 CCKEGTSPTITALGESPSTAISLKTRISPLSTQDLASSPW 353
           CC    S   T+L ESP+  + L  R+       +   PW
Sbjct: 82  CCAGVRSKGKTSLPESPNCGVQLTDRVLGGQPTKIDEFPW 121


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 376 WFPVLHHHCQD 408
           W+P + HHC D
Sbjct: 100 WYPEIKHHCPD 110


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 410  SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 514
            SWL   HV    V E   +V+    +GS S +T+K
Sbjct: 3198 SWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTK 3232


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/40 (27%), Positives = 15/40 (37%)
 Frame = +3

Query: 234 CCKEGTSPTITALGESPSTAISLKTRISPLSTQDLASSPW 353
           CC        ++   SP   I +  RI    T +L   PW
Sbjct: 77  CCASEQQTRTSSFPTSPECGIQVTDRIIGGQTTELEEFPW 116


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 718 KCNNPVRYINSNILLNNWNDPY 653
           + N  +R   S+++L  WN+PY
Sbjct: 55  RTNYNLRGHRSDVILVKWNEPY 76


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 95  HRQQ*RRRILVVETFCRY*QCKQFTK 18
           H QQ   +  ++  FCR  +CK+  K
Sbjct: 427 HHQQVHNQQRILYCFCRNVECKELEK 452


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 471 LTTSMPSTTFPKTTCLPSSQEVLTV 397
           L+ ++  T F +  CLP+S+E  TV
Sbjct: 226 LSETVEFTDFIRPICLPTSEESRTV 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,196
Number of Sequences: 2352
Number of extensions: 17704
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)