Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28a17
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 181 5e-46
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 124 4e-29
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 31 1.00
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 31 1.00
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 29 4.0
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 27 9.3
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 27 9.3
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 27 9.3
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 27 9.3
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 181 bits (440), Expect = 5e-46
Identities = 99/203 (48%), Positives = 125/203 (61%), Gaps = 3/203 (1%)
Frame = +3
Query: 78 VGDVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIAS 254
V DVK+ GL N LAE+++ +G+ S D Q+F +G AP A+ P+V RWY +AS
Sbjct: 2 VADVKSPAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVAS 61
Query: 255 YTPAERKTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXX 428
YT AERKTW+ G++P DLFGS
Sbjct: 62 YTDAERKTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEER 109
Query: 429 LKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 608
L AYA+KK+KK IAKSS++LDVKPWDDETD+ EME VR+IEM+GL+WG +KL+P+GY
Sbjct: 110 LAAYAEKKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGY 169
Query: 609 GINKLQIMCVIEDDKVSVDLLTE 677
GI KLQI+ VIED KVSVD L E
Sbjct: 170 GIKKLQIITVIEDLKVSVDDLIE 192
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 124 bits (300), Expect = 4e-29
Identities = 62/104 (59%), Positives = 73/104 (70%)
Frame = +3
Query: 366 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 545
DLFGS L AYA KK+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 546 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTE 677
VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L E
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIE 242
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 267 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 130
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical protein
M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 84 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 263
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 264 AERKT 278
++K+
Sbjct: 926 LKQKS 930
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 30.7 bits (66), Expect = 1.00
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 84 DVKTAQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANLPHVLRWYNQIASYTP 263
D + G D+ +Y E+ Y+ Y ++ D+Q N PH L ++N S P
Sbjct: 866 DPRVRPGAVDVVRYWQEQGYLIIYLTARPDMQQRVVSAWLAQHNFPHALLFFNNSFSTEP 925
Query: 264 AERKT 278
++K+
Sbjct: 926 LKQKS 930
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 483 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGY 608
SI+L VKP DDE ++++ NQ M G LW A++ Y
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSY 471
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 267 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 130
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 222 HVLRWYNQIASYTPAERKTWSQGTSP 299
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 584 LQTCACWVWHK*TANYVCH 640
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 584 LQTCACWVWHK*TANYVCH 640
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 222 HVLRWYNQIASYTPAERKTWSQGTSP 299
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 102 GLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPA 209
G+N LNQ L + +Y +G+ +++ V GK A
Sbjct: 93 GMNQLNQSLLQNTYATGWKHTRSAVAPIFSTGKMKA 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,513,629
Number of Sequences: 27780
Number of extensions: 290122
Number of successful extensions: 851
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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