Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28a07
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117198-1|AAI17199.1| 1572|Homo sapiens HECT, C2 and WW domain ...    30   8.1  
BC117194-1|AAI17195.1| 1572|Homo sapiens HECT, C2 and WW domain ...    30   8.1  
AB037722-1|BAA92539.1| 1581|Homo sapiens KIAA1301 protein protein.     30   8.1  

>BC117198-1|AAI17199.1| 1572|Homo sapiens HECT, C2 and WW domain
           containing E3 ubiquitin protein ligase 2 protein.
          Length = 1572

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 294 SGCASGDIMWLLNEPNQPYEDCEQLLCFRYYNG 392
           +G   G I+W + EP   + + E  +CF+YY+G
Sbjct: 114 TGTQKGQIVWRI-EPGPYFMEPEIKICFKYYHG 145


>BC117194-1|AAI17195.1| 1572|Homo sapiens HECT, C2 and WW domain
           containing E3 ubiquitin protein ligase 2 protein.
          Length = 1572

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 294 SGCASGDIMWLLNEPNQPYEDCEQLLCFRYYNG 392
           +G   G I+W + EP   + + E  +CF+YY+G
Sbjct: 114 TGTQKGQIVWRI-EPGPYFMEPEIKICFKYYHG 145


>AB037722-1|BAA92539.1| 1581|Homo sapiens KIAA1301 protein protein.
          Length = 1581

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 294 SGCASGDIMWLLNEPNQPYEDCEQLLCFRYYNG 392
           +G   G I+W + EP   + + E  +CF+YY+G
Sbjct: 123 TGTQKGQIVWRI-EPGPYFMEPEIKICFKYYHG 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,772,607
Number of Sequences: 237096
Number of extensions: 1752167
Number of successful extensions: 4392
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4392
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)