Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28a07
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein.    28   9.4  
U71001-1|AAC47314.1| 1375|Drosophila melanogaster Frazzled protein.    28   9.4  
AE014298-683|AAN09131.1|  642|Drosophila melanogaster CG2861-PB,...    28   9.4  
AE014297-891|AAF54347.1|  277|Drosophila melanogaster CG16736-PA...    28   9.4  
AE013599-1516|AAM68622.1| 1375|Drosophila melanogaster CG8581-PB...    28   9.4  
AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA...    28   9.4  

>U71002-1|AAC47315.1| 1526|Drosophila melanogaster Frazzled protein.
          Length = 1526

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 462  PNRLKEGMSRKRSGDQVSPFSYNNESFEMNSESPRVEFVAGTSHDIGHLSENVDKC 629
            PNRL+ G S   S D++   + +  + E+N E   +E   G   D+  ++ N  +C
Sbjct: 1474 PNRLQGGGSVVHSTDEIQRLAPSTSTEELNQEMANLE---GLMKDLSAITANEFEC 1526


>U71001-1|AAC47314.1| 1375|Drosophila melanogaster Frazzled protein.
          Length = 1375

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 462  PNRLKEGMSRKRSGDQVSPFSYNNESFEMNSESPRVEFVAGTSHDIGHLSENVDKC 629
            PNRL+ G S   S D++   + +  + E+N E   +E   G   D+  ++ N  +C
Sbjct: 1323 PNRLQGGGSVVHSTDEIQRLAPSTSTEELNQEMANLE---GLMKDLSAITANEFEC 1375


>AE014298-683|AAN09131.1|  642|Drosophila melanogaster CG2861-PB,
           isoform B protein.
          Length = 642

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
 Frame = +1

Query: 352 KIANNCYASGTTMVRAKNAR-RSHQHCRRVLKLTSR--ISRIDSKRACPENEAATKSRPS 522
           +IAN  Y S     R    + R  +  +R++K  S+  I ++  + A  EN AA   RP 
Sbjct: 58  QIANRTYMSAANSTRGTAYKIRKPRTVKRIIKAPSKSNIGKLLREAAKKENAAAGTQRPK 117

Query: 523 PITMRALR*TQKVLEWSSWQA 585
             T       Q     ++W A
Sbjct: 118 KATSTITSSVQNFPNPNNWPA 138


>AE014297-891|AAF54347.1|  277|Drosophila melanogaster CG16736-PA
           protein.
          Length = 277

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 10  RGVKCRRACAGFSFIFDVFKFDIVLKSVLFSRLLKTNCVNF*VFVFPWIHLQGRLGEIWP 189
           RG+KC  A  GF+++F  +K + +  + +   +L T   +    V  W H   RL E W 
Sbjct: 137 RGLKCMYAKGGFTYLFTGWKINSISSTAV--AVLYTPISDKVHTVISWFH---RLDEPWL 191

Query: 190 SN 195
           S+
Sbjct: 192 SD 193


>AE013599-1516|AAM68622.1| 1375|Drosophila melanogaster CG8581-PB,
            isoform B protein.
          Length = 1375

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 462  PNRLKEGMSRKRSGDQVSPFSYNNESFEMNSESPRVEFVAGTSHDIGHLSENVDKC 629
            PNRL+ G S   S D++   + +  + E+N E   +E   G   D+  ++ N  +C
Sbjct: 1323 PNRLQGGGSVVHSTDEIQRLAPSTSTEELNQEMANLE---GLMKDLSAITANEFEC 1375


>AE013599-1515|AAF58493.1| 1526|Drosophila melanogaster CG8581-PA,
            isoform A protein.
          Length = 1526

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 462  PNRLKEGMSRKRSGDQVSPFSYNNESFEMNSESPRVEFVAGTSHDIGHLSENVDKC 629
            PNRL+ G S   S D++   + +  + E+N E   +E   G   D+  ++ N  +C
Sbjct: 1474 PNRLQGGGSVVHSTDEIQRLAPSTSTEELNQEMANLE---GLMKDLSAITANEFEC 1526


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,745,092
Number of Sequences: 53049
Number of extensions: 573808
Number of successful extensions: 1843
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)