Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27p23
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016687-2|AAC48091.2| 280|Caenorhabditis elegans Hypothetical ... 101 5e-22
AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe... 33 0.20
AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein... 32 0.27
AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe... 32 0.27
AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe6... 32 0.27
Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 32 0.35
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 32 0.35
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 32 0.35
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 32 0.35
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 32 0.35
AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical ... 30 1.1
Z73975-2|CAA98275.1| 104|Caenorhabditis elegans Hypothetical pr... 29 1.9
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 29 1.9
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 29 1.9
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 29 3.3
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 28 5.8
U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation... 28 5.8
AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determini... 28 5.8
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 27 7.6
AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical ... 27 7.6
>AF016687-2|AAC48091.2| 280|Caenorhabditis elegans Hypothetical
protein T21D12.3 protein.
Length = 280
Score = 101 bits (241), Expect = 5e-22
Identities = 47/114 (41%), Positives = 66/114 (57%), Gaps = 2/114 (1%)
Frame = +2
Query: 260 EEIIAEDYDSKPNENGKDEPWEGFVDPVKGHRGCPNKSNIYHECSTFCIKRWKQG--KLV 433
EE+IAE+Y+ +P + + F + G GCPNK N YH C FC W G +
Sbjct: 21 EEVIAENYEKEPEK-------KSFEENSAGAPGCPNKWNQYHVCLEFCYDHWGDGTPEYR 73
Query: 434 PTETYLEHKEKVLELWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPPGHPRAV 595
E Y+++K ++L +PLP W EV+DEG ++YFWN T+ V W P HPRA+
Sbjct: 74 LPERYVQNKNRMLAKFPLPENWVEVYDEGLAKYYFWNKTTDEVCWYSPRHPRAI 127
>AC025723-10|AAK29940.1| 691|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform a protein.
Length = 691
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPPGHPRAV 595
LPPGWE+ ++ G Y+W+V + + PP R V
Sbjct: 265 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPPPPVRDV 300
>AJ345015-1|CAC87812.1| 577|Caenorhabditis elegans FEH-1 protein
protein.
Length = 577
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
LPPGWE+ ++ G Y+W+V + + PP
Sbjct: 147 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPP 176
>AC025723-11|AAN84832.2| 554|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform c protein.
Length = 554
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
LPPGWE+ ++ G Y+W+V + + PP
Sbjct: 124 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPP 153
>AC025723-9|AAN84831.1| 640|Caenorhabditis elegans Mammalian fe65
homolog protein1, isoform b protein.
Length = 640
Score = 32.3 bits (70), Expect = 0.27
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
LPPGWE+ ++ G Y+W+V + + PP
Sbjct: 235 LPPGWEK-HEDPQGYSYYWHVDSGTIQRQPP 264
>Z81056-8|CAB02907.2| 307|Caenorhabditis elegans Hypothetical
protein F09F3.12 protein.
Length = 307
Score = 31.9 bits (69), Expect = 0.35
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +3
Query: 363 LIKVIFIM--NVLLFVLK-DGSKVNWYRLRHI*NTRRKF*SYGPCHQDGKKCLMKVMVNI 533
+I ++FI+ N LLF++ G+ +N Y L +TRR G K CL+K + NI
Sbjct: 1 MITMVFIIFANFLLFIISFSGTILNSYLLYKF-STRR-----GVISGFYKLCLVKTVPNI 54
Query: 534 IFGMCTLIW 560
+ C LIW
Sbjct: 55 VVCACFLIW 63
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 31.9 bits (69), Expect = 0.35
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHY 535
LPPGWE+V D+ YG Y
Sbjct: 332 LPPGWEQVDDQNYGTFY 348
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
LPP WE + E G YF + +T +W P
Sbjct: 300 LPPNWETAYTEN-GDKYFIDHNTGTTTWDDP 329
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 31.9 bits (69), Expect = 0.35
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 445 CLSRYQFTLLPSFNTKSRTFMINITFIRASSMAFDRIDKAFPRLI-FSIFVRLTVIIFCN 269
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
Query: 268 YFFV 257
+ +
Sbjct: 423 LWSI 426
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 31.9 bits (69), Expect = 0.35
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 445 CLSRYQFTLLPSFNTKSRTFMINITFIRASSMAFDRIDKAFPRLI-FSIFVRLTVIIFCN 269
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
Query: 268 YFFV 257
+ +
Sbjct: 423 LWSI 426
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 31.9 bits (69), Expect = 0.35
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 445 CLSRYQFTLLPSFNTKSRTFMINITFIRASSMAFDRIDKAFPRLI-FSIFVRLTVIIFCN 269
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
Query: 268 YFFV 257
+ +
Sbjct: 423 LWSI 426
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 31.9 bits (69), Expect = 0.35
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 445 CLSRYQFTLLPSFNTKSRTFMINITFIRASSMAFDRIDKAFPRLI-FSIFVRLTVIIFCN 269
CL Q L+ FN + I ++ + + F RI FP L+ F + V VI FCN
Sbjct: 363 CLPAIQTVLVIVFNAIDGDPITGICYVGNTDLQFQRIFVLFPLLVYFIVGVLFLVIGFCN 422
Query: 268 YFFV 257
+ +
Sbjct: 423 LWSI 426
>AC087082-1|AAG37982.2| 157|Caenorhabditis elegans Hypothetical
protein Y92H12BM.1 protein.
Length = 157
Score = 30.3 bits (65), Expect = 1.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 497 WEEVFDEGYGQHYFWNVHTNLVSWIPP 577
W E+FD G++Y++N +++ W P
Sbjct: 8 WWELFDSKTGRYYYYNASSSVTKWQKP 34
>Z73975-2|CAA98275.1| 104|Caenorhabditis elegans Hypothetical
protein T06E8.2 protein.
Length = 104
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 553 SVHIPKIMLTITFIKHFFP 497
SVH P I+LTITF +FP
Sbjct: 82 SVHSPSILLTITFALSYFP 100
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
LP GWE FD+ YG+ Y+ + T +W P
Sbjct: 221 LPDGWEMRFDQ-YGRKYYVDHTTKSTTWERP 250
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 476 LWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
L PLP GWE+ D + YF N W P
Sbjct: 323 LGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 485 LPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
LP GWE FD+ YG+ Y+ + T +W P
Sbjct: 221 LPDGWEMRFDQ-YGRKYYVDHTTKSTTWERP 250
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 476 LWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
L PLP GWE+ D + YF N W P
Sbjct: 323 LGPLPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 28.7 bits (61), Expect = 3.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 530 HYFWNVHTNLVSWIPPGH 583
HY+WN+ N W P H
Sbjct: 195 HYYWNLFDNSTRWTAPAH 212
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 470 LELWPLPPGWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
+E P+P GWE +D G YF + ++ +W P
Sbjct: 200 VEQLPMPQGWEMCYDSD-GVRYFKDHNSKTTTWDDP 234
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +2
Query: 272 AEDYDSKPNENGKDEPWEGFVDPVKGHRGCPNKSNI 379
A+ P E GKD P EG PV G G P S I
Sbjct: 215 ADGQPGMPGEPGKDAPQEG--SPVPGDPGPPGDSGI 248
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 494 GWEEVFDEGYGQHYFWNVHTNLVSWIPP 577
GW E ++ G+ +F+N T WIPP
Sbjct: 101 GWFE-YETDVGRTFFFNKETGKSQWIPP 127
>U23484-8|AAC46765.1| 1200|Caenorhabditis elegans Masculinisation of
germline protein5 protein.
Length = 1200
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 335 DPVKGHRGCPNKSNIYHECSTFCIKRWKQGKLVPTETYLEHKEKVLELWPLPPGW 499
DP +G+R + N+Y S+ C ++ + +V E + KE + E+ + P W
Sbjct: 1094 DPQEGYRTLTDGQNVYIHPSSACFQQQPEW-VVYHELVMTTKEYMREVTAIDPKW 1147
>AF286899-1|AAG01332.1| 1200|Caenorhabditis elegans sex determining
protein MOG-5 protein.
Length = 1200
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 335 DPVKGHRGCPNKSNIYHECSTFCIKRWKQGKLVPTETYLEHKEKVLELWPLPPGW 499
DP +G+R + N+Y S+ C ++ + +V E + KE + E+ + P W
Sbjct: 1094 DPQEGYRTLTDGQNVYIHPSSACFQQQPEW-VVYHELVMTTKEYMREVTAIDPKW 1147
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 27.5 bits (58), Expect = 7.6
Identities = 19/65 (29%), Positives = 28/65 (43%)
Frame = +1
Query: 43 CELRVILPSFHYVITGIKSANTQKQPKKYQRYARYTTQRNAFTAGVSCSFS*KRPFETKC 222
C++ +I P + GI KQP K AR A + V CS S P ++C
Sbjct: 454 CDIDIICPEMSECVDGICC----KQPPK----ARCGNGLMALSIPVHCSLSDDCPIASRC 505
Query: 223 RFHRC 237
+ +C
Sbjct: 506 EYGKC 510
>AC006830-7|AAK68613.2| 479|Caenorhabditis elegans Hypothetical
protein ZK105.6 protein.
Length = 479
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 148 TTQRNAFTAGVSCSF 192
TTQ++AFTAG SC F
Sbjct: 60 TTQKSAFTAGKSCFF 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,331,296
Number of Sequences: 27780
Number of extensions: 272457
Number of successful extensions: 919
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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