Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27p07
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 31 0.49
AL132841-6|CAB60331.2| 494|Caenorhabditis elegans Hypothetical ... 29 2.0
U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory recep... 27 6.0
AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative chem... 27 6.0
AC084197-21|ABN43081.1| 172|Caenorhabditis elegans Hypothetical... 27 6.0
Z83108-3|CAB05511.1| 457|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical pr... 27 8.0
U00031-1|AAZ82851.1| 330|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 27 8.0
AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein. 27 8.0
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 31.1 bits (67), Expect = 0.49
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 445 RACSRCLKRISIRRCFKCSWTIFR 516
+ C +CLK I +CF+ WT+FR
Sbjct: 286 KVCPKCLKMIGCAKCFRW-WTVFR 308
>AL132841-6|CAB60331.2| 494|Caenorhabditis elegans Hypothetical
protein Y15E3A.3 protein.
Length = 494
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 328 DVGRTEDYHKLIEYGLDPKVAAKLDDIYKTGKASARRVGRACSRCLKRI 474
D+ E + +I P + A+LD++Y G RR+ +A CL +
Sbjct: 158 DLPHHEQFMFIIPKSRVPNIDARLDELYHVGFMKNRRLLKAALSCLDTV 206
>U39645-3|AAA80362.3| 439|Caenorhabditis elegans Gustatory receptor
family protein 2 protein.
Length = 439
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 151 EECTILLFHCF-ICLNIFCFFVFRTIRELSFCY-KITKIV 264
E + +LF+ + +C+ IFCF +F + S C+ ++ IV
Sbjct: 287 EYYSFVLFYSYGVCIPIFCFLMFVGMSAQSICWSEVVSIV 326
>AF387605-1|AAK70488.1| 427|Caenorhabditis elegans putative
chemoreceptor GUR-2 protein.
Length = 427
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 151 EECTILLFHCF-ICLNIFCFFVFRTIRELSFCY-KITKIV 264
E + +LF+ + +C+ IFCF +F + S C+ ++ IV
Sbjct: 275 EYYSFVLFYSYGVCIPIFCFLMFVGMSAQSICWSEVVSIV 314
>AC084197-21|ABN43081.1| 172|Caenorhabditis elegans Hypothetical
protein Y73B6BL.47 protein.
Length = 172
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3
Query: 358 VCGNLLSGQHQNPSQLPHHRIFL 290
VC L QH NP QLP IFL
Sbjct: 141 VCARDLCNQHSNPFQLPVILIFL 163
>Z83108-3|CAB05511.1| 457|Caenorhabditis elegans Hypothetical
protein F44E5.3 protein.
Length = 457
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 515 LKIVQEHLKHRRMEILLRHLEHARPTL 435
LKIV+++LKH + LR L+ +R TL
Sbjct: 241 LKIVEQYLKHEKPLQKLRFLDCSRTTL 267
>Z83104-5|CAC35810.1| 570|Caenorhabditis elegans Hypothetical
protein F09B12.6 protein.
Length = 570
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 411 INVVELGGYLRIQAILNKFV--VIFCPANIRIL-PSYLIIGYFSIALRHSLFYNFC 253
+ + LG +L I + +FV +I N ++ P YLII I L +L ++ C
Sbjct: 434 LGITALGSFLLISYFVVRFVRYLIAINCNCDLMQPQYLIISGILIVLMFALLFSCC 489
>U00031-1|AAZ82851.1| 330|Caenorhabditis elegans Hypothetical
protein B0361.4 protein.
Length = 330
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 385 VAAKLDDIYKTGKASARRVGRACSRCLKRISIRRCFKCS 501
VAA+ + KTG + R+ L R+ I++CFK +
Sbjct: 43 VAAQQNKDDKTGGSGGRKASSGLVPSLNRLRIQQCFKAA 81
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 399 ELGGYLRIQAILNKFVVIFCPANIRILPSYLIIGY 295
E G Y + ++ I+ + ILPSYL+ Y
Sbjct: 37 EYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEY 71
>AB012700-1|BAA89795.1| 570|Caenorhabditis elegans FLR-4 protein.
Length = 570
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 411 INVVELGGYLRIQAILNKFV--VIFCPANIRIL-PSYLIIGYFSIALRHSLFYNFC 253
+ + LG +L I + +FV +I N ++ P YLII I L +L ++ C
Sbjct: 434 LGITALGSFLLISYFVVRFVRYLIAINCNCDLMQPQYLIISGILIVLMFALLFSCC 489
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,244,339
Number of Sequences: 27780
Number of extensions: 256369
Number of successful extensions: 567
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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