Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27p06
(562 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1358 - 26372559-26372887,26373183-26373262,26373287-263734... 111 3e-25
04_03_0156 - 11963580-11963914,11964422-11964517,11964618-119646... 91 3e-24
09_01_0014 + 357398-357583,360213-360323,360520-360676,361067-36... 80 1e-15
06_03_0852 - 25371461-25371783,25372080-25372159,25372472-253725... 49 2e-06
01_05_0146 + 18591235-18591345,18591662-18591830,18592282-185923... 38 0.007
02_05_1197 - 34908382-34908582,34908664-34908837,34909239-349093... 31 0.83
08_02_0174 + 13769487-13770352,13770357-13770408,13770438-137707... 30 1.5
10_07_0103 - 12886489-12886584,12887952-12888086 29 1.9
05_01_0339 + 2673862-2675637 29 1.9
11_03_0093 - 9852075-9852871,9852911-9853009,9853208-9853646,985... 29 3.4
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 29 3.4
03_06_0108 + 31708713-31709079,31709258-31709822,31709933-317100... 29 3.4
09_03_0006 + 11426346-11426420,11426733-11427452 28 4.4
11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950 28 5.9
09_06_0007 + 20155697-20156107 28 5.9
06_01_0800 - 5988425-5988580,5988842-5988951,5990275-5990392,599... 28 5.9
05_06_0132 + 25893241-25893435,25894266-25894487,25894567-258948... 28 5.9
03_02_0679 + 10350238-10350693 28 5.9
02_04_0453 + 23053621-23054167,23054867-23054958,23055085-230551... 28 5.9
01_06_0646 - 30832201-30832838,30833643-30833838,30833975-308341... 28 5.9
01_05_0145 + 18588201-18588242,18588925-18589044,18589201-185894... 28 5.9
11_01_0318 - 2373511-2375073 27 7.7
09_01_0106 + 1673737-1674522,1674625-1675089 27 7.7
08_02_0311 - 15635165-15635590,15635777-15638698 27 7.7
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 27 7.7
05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718 27 7.7
04_01_0477 - 6221990-6223224,6227722-6228817 27 7.7
>08_02_1358 -
26372559-26372887,26373183-26373262,26373287-26373420,
26373546-26373689,26373809-26373919,26374165-26374305,
26376839-26376964,26377072-26377263
Length = 418
Score = 111 bits (268), Expect = 3e-25
Identities = 58/135 (42%), Positives = 81/135 (60%), Gaps = 7/135 (5%)
Frame = +3
Query: 177 GYQCEEHNVVTEDGFVLTVFRVSSGQ-------RCSRTQIPVLLVHGLLQSADSWLDAGP 335
GY CEEH V T+DG++L + R+ G+ + + PVLL HG+L +WL P
Sbjct: 57 GYPCEEHEVTTQDGYILGLQRIPRGRIGGVTGGGAAAARQPVLLQHGVLVDGMTWLLGSP 116
Query: 336 GSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLPAILDYV 515
L Y+LAD DVW++N RG +S RH++LDP S +YWN+S D+I D+PAI+DYV
Sbjct: 117 EESLPYILADQGFDVWIANNRGTRWSSRHVSLDPKS-RSYWNWSWDDIVVNDMPAIVDYV 175
Query: 516 LDRSRADVLNYVGFS 560
+ +YVG S
Sbjct: 176 CSHT-GQKPHYVGHS 189
>04_03_0156 -
11963580-11963914,11964422-11964517,11964618-11964697,
11965250-11965290,11965402-11965548,11965922-11966035,
11968842-11968961,11969491-11969631,11969892-11970014,
11970357-11970566
Length = 468
Score = 91.1 bits (216), Expect(2) = 3e-24
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Frame = +3
Query: 177 GYQCEEHNVVTEDGFVLTVFRVSSGQRCSRT------QIPVLLVHGLLQSADSWLDAGPG 338
GY CEEH V TEDG++L++ R+ SG+ + ++PVLL HGL+ +WL P
Sbjct: 63 GYACEEHTVTTEDGYILSLQRIPSGRGETAAGGGGGGKVPVLLQHGLMMDGVTWLMNSPN 122
Query: 339 SGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAY 455
L Y+LAD +DVW++N+RG YSR H +L Y
Sbjct: 123 ESLGYILADNGYDVWIANSRGTVYSRHHTSLVSSDSVIY 161
Score = 38.3 bits (85), Expect(2) = 3e-24
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 450 AYWNFSADEIGYFDLPAILDYVLDRSRADVLNYVGFS 560
AYWN+S DE+ DL A++ YV ++ ++YVG S
Sbjct: 199 AYWNWSWDELSSKDLSAVVQYVYSQAGQQKMHYVGHS 235
>09_01_0014 +
357398-357583,360213-360323,360520-360676,361067-361233,
362012-362122,362206-362349,362436-362476,364134-364174,
364175-364261,365402-365724
Length = 455
Score = 79.8 bits (188), Expect = 1e-15
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Frame = +3
Query: 177 GYQCEEHNVVTEDGFVLTVFRVSSGQR--CSRTQIPVLLVHGLLQSADSWLDAGPGSGLA 350
GY C EHNV T+DGF+L++ + G+ T PV L HGL Q D+W L
Sbjct: 55 GYPCTEHNVETKDGFLLSLQHIPHGKNKAADSTGPPVFLQHGLFQGGDTWFINSAEQSLG 114
Query: 351 YLLADACHDVWLSNTRGNYYSRRHLTLDPDS--DAAYWN 461
Y+LAD DVW+ N RG +S+ H T + +WN
Sbjct: 115 YILADNGFDVWIGNVRGTRWSKGHSTFSVHDKVNTLHWN 153
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 453 YWNFSADEIGYFDLPAILDYVLDRSRADVLNYVGFS 560
+W++S E+ +DL A+L YV +++ +L YVG S
Sbjct: 209 FWDWSWQELAEYDLLAMLGYVYTVTQSKIL-YVGHS 243
>06_03_0852 -
25371461-25371783,25372080-25372159,25372472-25372554,
25372597-25372740,25372836-25372946,25373238-25373354,
25373436-25373562,25374160-25374296
Length = 373
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRCSRTQI----PVLLVHGLL 302
P L A GY CEE+ V TEDG++L++ R+ G S T PVLL HGL+
Sbjct: 67 PHPLSMCQSRAAAFGYPCEEYKVTTEDGYILSLKRIPHGPHDSNTSTEMRPPVLLFHGLM 126
Query: 303 QSADSW 320
+ W
Sbjct: 127 VAYWEW 132
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +3
Query: 450 AYWNFSADEIGYFDLPAILDYVLDRSRADVLNYVGFS 560
AYW +S DE+ +DLPA+L + D + + ++Y+G S
Sbjct: 128 AYWEWSWDELASYDLPAVLQFAYDHT-GEKIHYIGHS 163
>01_05_0146 +
18591235-18591345,18591662-18591830,18592282-18592334,
18592369-18592487,18592618-18593698
Length = 510
Score = 37.5 bits (83), Expect = 0.007
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +3
Query: 354 LLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLPAILDYV 515
L +A +DV+L N RG SR H+ + S YW +S +E G D+PAI++ +
Sbjct: 121 LWVNAGYDVFLGNLRG-LVSREHVDKNISS-YKYWKYSVNEHGTKDMPAIVEEI 172
>02_05_1197 -
34908382-34908582,34908664-34908837,34909239-34909337,
34909444-34909644,34910229-34910336,34910498-34910882,
34911132-34911584,34911868-34912094,34912211-34912270
Length = 635
Score = 30.7 bits (66), Expect = 0.83
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 210 EDGFVLT--VFRVSSGQRCSRTQIPVLLVHGLLQSADSWLDAGPGSGLAYLLADACHDVW 383
+D +LT VF + S P G++ +A L AGP L Y L A H W
Sbjct: 97 DDQIILTALVFYLVSATMPQAQVAPWWSTKGMVVTAV--LHAGPVEFLYYWLHRALHHHW 154
Query: 384 LSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYFDLPAI 503
L Y+S H ++ + + + A+E+ YF L AI
Sbjct: 155 L---YARYHSHHHASIVTEPITSVIHPFAEEVVYFVLLAI 191
>08_02_0174 +
13769487-13770352,13770357-13770408,13770438-13770705,
13770745-13771022,13771049-13771486
Length = 633
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +3
Query: 105 NETKRQLGYPPDSLLNVTELATRHG 179
NET+R LG P SL NV + TR G
Sbjct: 372 NETRRILGQPDSSLENVKAITTRGG 396
>10_07_0103 - 12886489-12886584,12887952-12888086
Length = 76
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 264 RTQIPVLLVHGLLQSADSWLDAGPGSGLAYL 356
R +P+LLV +AD DAG G+G+ +L
Sbjct: 9 RLAVPLLLVLAAAAAADGVADAGAGAGMTHL 39
>05_01_0339 + 2673862-2675637
Length = 591
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 294 GLLQSADSWLDAGPGSGLAYL---LADACHDVWLSNTRGNYYSRRHLTLDPDSDAAY 455
GLL A S+++ GP + A L L AC S G Y + + L LDP AAY
Sbjct: 475 GLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNSEV-GKYAAEKLLLLDPSCTAAY 530
>11_03_0093 -
9852075-9852871,9852911-9853009,9853208-9853646,
9853803-9854129
Length = 553
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 105 NETKRQLGYPPDSLLNVTELATRHG 179
NET+R LG P S+ NV + TR G
Sbjct: 265 NETRRILGQPDSSVENVKAITTRGG 289
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 329 RVQPRVSALQQTVHEQHWDLCTRAPLAARHAENGQHESV 213
+V+P +SALQ+ +H Q ++ T A A + +G ++ +
Sbjct: 245 QVKPALSALQRLIHSQDEEVLTDACWALSYLSDGTNDKI 283
>03_06_0108 +
31708713-31709079,31709258-31709822,31709933-31710015,
31710231-31710319,31710486-31710559,31710654-31710704,
31710807-31710883,31711454-31712031,31712388-31712555,
31713364-31713417,31713456-31713467,31713554-31713715
Length = 759
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = -3
Query: 356 QVGEAGAGPRVQPRVSALQQTVHEQHWDLCTRA--PLAARHAENGQH 222
+VG+ G V +AL Q + W + T A P AAR + QH
Sbjct: 488 KVGDGGGAAAVADAAAALVQAGNVAEWKMATAAALPAAARTEQQQQH 534
>09_03_0006 + 11426346-11426420,11426733-11427452
Length = 264
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +1
Query: 193 SITWSRRTDSC*PFSACRAANGARVHRSQCCSCTVCCRALTLGW 324
S +WS + P S R A + S C + CC A T W
Sbjct: 153 STSWSAMWPALRPMSLTRLTPFAALSTSTCPAAIACCAASTAVW 196
>11_04_0182 - 14597325-14597881,14598082-14598243,14598416-14598950
Length = 417
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 105 NETKRQLGYPPDSLLNVTELATRHGYQCEEH-NVVTEDGFVLTVFRVSSGQRCSRTQIP 278
NE+ R LG P S+ NV + TR G + H + + +S G C++ +P
Sbjct: 209 NESGRILGQPEPSVENVKAITTRGGNPEDPHQRAIIGRNASAHLRTLSKGHPCNKRPLP 267
>09_06_0007 + 20155697-20156107
Length = 136
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 326 VQPRVSALQQTVHEQHWDLCTRAPL 252
+QPR SA TVH +W + +PL
Sbjct: 39 LQPRGSAYTLTVHRYYWSAISHSPL 63
>06_01_0800 -
5988425-5988580,5988842-5988951,5990275-5990392,
5990649-5990723,5990856-5991030,5991160-5991425
Length = 299
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = -1
Query: 343 PEPGPASSQ-ESALCSRPCTSSTGICVREHRW 251
P PG A +AL P T TGIC R+ W
Sbjct: 14 PPPGAAGPDGAAALPPPPGTDMTGICFRDQLW 45
>05_06_0132 +
25893241-25893435,25894266-25894487,25894567-25894863,
25894944-25895111,25895201-25895368,25895456-25895536,
25895704-25895770,25895874-25895971,25896587-25896659,
25896753-25896823,25896919-25896968,25897698-25897810,
25898182-25898300,25898629-25898721,25899025-25899051,
25899422-25899823,25900467-25900513,25900612-25900651,
25900733-25900795,25900881-25901018,25901873-25902031,
25902111-25902164,25902324-25902392,25902514-25902643,
25902909-25902949,25903133-25903178,25903200-25903357,
25903560-25903605,25903702-25903853,25904022-25904243
Length = 1202
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 180 YQCEEHNVVTEDGFVLTVFRVSSGQRCSRTQIPVLLVHGLLQSADSWLDAGPGSGL 347
Y C+ + T + F V G R +T + V ++ L+ S+ GPG G+
Sbjct: 343 YHCQADSTSTH---IALAFEVPGGWRQEKTAMIVTVLQVLMGGGGSFSTGGPGKGM 395
>03_02_0679 + 10350238-10350693
Length = 151
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 258 CSRTQIPVLLVHGLLQSADSWLDAGPGSGLAYLLAD 365
CS + +P++L+ LL A A PG GLA LAD
Sbjct: 3 CSGSFLPIMLLPLLLAGAAVAGGAPPGLGLAQRLAD 38
>02_04_0453 +
23053621-23054167,23054867-23054958,23055085-23055149,
23058558-23059086
Length = 410
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 358 WQTLATTCGSPTLAATTTRGATSL 429
W TLA+ G P + A T GAT L
Sbjct: 256 WHTLASGSGKPLVTAITKDGATKL 279
>01_06_0646 -
30832201-30832838,30833643-30833838,30833975-30834126,
30834258-30834303,30834992-30835216,30835374-30835414,
30835705-30835834,30835951-30836019,30836254-30836307,
30836389-30836547,30836854-30836991,30837079-30837141,
30837225-30837264,30837369-30837415,30838062-30838373
Length = 769
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 435 PDSDAAYWNFSADEIGYF--DLPAILDYVLD 521
PD DAAY + GY D+P DY+ D
Sbjct: 72 PDDDAAYAKLEEGDYGYLLDDVPHFTDYLSD 102
>01_05_0145 +
18588201-18588242,18588925-18589044,18589201-18589457,
18589980-18590048,18590091-18590115
Length = 170
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 159 ELATRHGYQCEEHNVVTEDGFVLTVFRVSS 248
++ T GY E VVT DG+VL + R+ S
Sbjct: 134 DVITELGYPFEAIKVVTSDGYVLLLERIPS 163
>11_01_0318 - 2373511-2375073
Length = 520
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = +1
Query: 232 FSACRAANGARV---HRSQCCSCTVCCRALTLGWTR 330
FS C AA G + R CSC VC LT W R
Sbjct: 27 FSVCLAALGVVLLVARRWPWCSCHVCRAYLTGSWAR 62
>09_01_0106 + 1673737-1674522,1674625-1675089
Length = 416
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 340 EPGPASSQESALCSRPCTSSTGICVREHR 254
+P PASS A+ S S++GI VRE +
Sbjct: 125 QPPPASSASMAMLSEERISASGIVVRERQ 153
>08_02_0311 - 15635165-15635590,15635777-15638698
Length = 1115
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = -3
Query: 347 EAGAGPRVQPRVSALQQTVHEQHWDLCTRAPLAARHAENGQHESVLR 207
E GA P QP+V HW T A A HA+ G H +L+
Sbjct: 521 ETGADPSEQPKVKKATWMADGSHWP-GTWAASAPDHAK-GNHAGILQ 565
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 334 PAPASPTCWQTLATTCGSPTLAATTTRGATSLS 432
PAP S QT A+ G P + A GATS++
Sbjct: 111 PAPESDAPAQTFASEDGVPNVRARVLGGATSIN 143
>05_03_0321 + 12363355-12363614,12363689-12364145,12364165-12365718
Length = 756
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 105 NETKRQLGYPPDSLLNVTELATRHG 179
NET R LG P S+ NV + TR G
Sbjct: 389 NETGRILGQPDSSIENVKAITTRGG 413
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +3
Query: 150 NVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRCSRTQIPVLLVHGLLQSADSW--- 320
+V E+ + G C H+ + + L + + ++PV + G L DSW
Sbjct: 270 DVLEMDSTLGLYCCNHDKTIVNIWALQDYEQEVWSIKYQVELPVTCIRGELDVGDSWSVM 329
Query: 321 LDAGPGSGLAYLLADACHDVWLSNTRGNYYSR 416
+ + G + +L D V +T G +R
Sbjct: 330 VSSEDGDEVVVVLVDCGQSVLCFDTDGKLLAR 361
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,989,178
Number of Sequences: 37544
Number of extensions: 284173
Number of successful extensions: 1152
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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