Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27p06
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical pr... 118 3e-27
AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical ... 118 4e-27
U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical pr... 112 1e-25
Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical pr... 102 2e-22
AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical ... 97 1e-20
AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical ... 97 1e-20
AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical ... 95 2e-20
AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical ... 93 2e-19
Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical pr... 91 4e-19
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 28 5.3
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 28 5.3
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 27 7.0
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 27 7.0
AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical ... 27 7.0
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 9.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 9.2
>Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical
protein F46B6.8 protein.
Length = 411
Score = 118 bits (284), Expect = 3e-27
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 4/146 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRC---SRTQIPVLLV-HGLL 302
P+ +N +++ R GY+ E H V TEDG++L + R+ G+ + PV+L+ HGLL
Sbjct: 29 PELNMNTSQIIERWGYKAEVHTVTTEDGYILQMQRIPYGKTSVTWPNGKRPVILLQHGLL 88
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
A W+D P A++ ADA DVWL N RG Y R++ LDP S+ A+W FS DE+
Sbjct: 89 ACASDWVDNLPTQSAAFVFADAGFDVWLGNVRGTTYGRKNTKLDP-SETAFWQFSWDEMA 147
Query: 483 YFDLPAILDYVLDRSRADVLNYVGFS 560
+D+PA++D+VL + + L Y+G S
Sbjct: 148 QYDVPAMVDHVLAMTGQENLYYMGHS 173
>AC024835-2|AAK68537.1| 684|Caenorhabditis elegans Hypothetical
protein Y57E12B.3 protein.
Length = 684
Score = 118 bits (283), Expect = 4e-27
Identities = 61/148 (41%), Positives = 88/148 (59%), Gaps = 6/148 (4%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR-----CSRTQIPVL-LVHG 296
P++L++V E+ T GY E H VVT DG++LT+ R+ G+ S+T PV+ L HG
Sbjct: 271 PEALMDVPEIITHWGYPVETHKVVTVDGYILTLHRIPHGKNETSKSASKTPKPVVFLQHG 330
Query: 297 LLQSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADE 476
LL ++ WL P Y+ AD +DVWL N RGN YS+ H T +D +W FS +E
Sbjct: 331 LLCTSSIWLLNLPRQSAGYIFADQGYDVWLGNMRGNTYSKEH-TRMTSADRRFWKFSWEE 389
Query: 477 IGYFDLPAILDYVLDRSRADVLNYVGFS 560
+ +DLPA+++Y L ++ L YVG S
Sbjct: 390 MARYDLPAMINYALKTTKRQNLYYVGHS 417
>U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical
protein K04A8.5 protein.
Length = 411
Score = 112 bits (270), Expect = 1e-25
Identities = 55/144 (38%), Positives = 83/144 (57%), Gaps = 6/144 (4%)
Frame = +3
Query: 147 LNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRC------SRTQIPVLLVHGLLQS 308
L+ EL GY E +N T+DGF+L + R+ G+ + ++ + L HG L S
Sbjct: 34 LDTPELIKSWGYSVEIYNTTTKDGFILELHRIPYGREVPTSSDVNNSRPVIFLQHGFLCS 93
Query: 309 ADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIGYF 488
+ W+ P ++ ADA DVWL N RGN YSR+H++L+PD D +W++S D+I +
Sbjct: 94 SFDWVANSPHQSAGFVFADAGFDVWLGNFRGNTYSRKHVSLNPDKDPKFWDWSWDQISEY 153
Query: 489 DLPAILDYVLDRSRADVLNYVGFS 560
DLPA++ L+ S + L Y GFS
Sbjct: 154 DLPAMIGKALEISGQESLYYTGFS 177
>Z79696-2|CAB01973.1| 405|Caenorhabditis elegans Hypothetical
protein F54F3.3 protein.
Length = 405
Score = 102 bits (245), Expect = 2e-22
Identities = 54/146 (36%), Positives = 86/146 (58%), Gaps = 4/146 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR---CSRTQIPVLLV-HGLL 302
P+ + ++ R GY ++V TEDG++L + R+ G+ + PV+ + HGL
Sbjct: 25 PEMKMTTPQIIMRWGYPAMIYDVTTEDGYILELHRIPYGKTNVTWPNGKKPVVFMQHGLE 84
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
S+ +W+ P A+L ADA +DVWL N RGN YS +H L P S +A+W++S DE+
Sbjct: 85 CSSSNWVVNLPTESAAFLFADAGYDVWLGNFRGNTYSMKHKNLKP-SHSAFWDWSWDEMQ 143
Query: 483 YFDLPAILDYVLDRSRADVLNYVGFS 560
+DLPA+++ L+ + D L Y+G S
Sbjct: 144 QYDLPAMIEKALEVTGQDSLYYIGHS 169
>AF067942-3|AAL11486.1| 351|Caenorhabditis elegans Hypothetical
protein ZK6.7b protein.
Length = 351
Score = 96.7 bits (230), Expect = 1e-20
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR---CSRTQIPVLLV-HGLL 302
P+ + ++ R GY + V T+DG++L + R+ G+ + PV+ + HGLL
Sbjct: 23 PELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLL 82
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
++ W+ P +L ADA DVWL N RGN YS +H L P S +A+W++S DE+
Sbjct: 83 CASSDWVVNLPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKP-SHSAFWDWSWDEMA 141
Query: 483 YFDLPAILDYVLDRSRADVLNYVGFS 560
+DL A++++VL+ + D + Y+G S
Sbjct: 142 TYDLNAMINHVLEVTGQDSVYYMGHS 167
>AF067942-2|AAG45574.1| 403|Caenorhabditis elegans Hypothetical
protein ZK6.7a protein.
Length = 403
Score = 96.7 bits (230), Expect = 1e-20
Identities = 51/146 (34%), Positives = 84/146 (57%), Gaps = 4/146 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR---CSRTQIPVLLV-HGLL 302
P+ + ++ R GY + V T+DG++L + R+ G+ + PV+ + HGLL
Sbjct: 23 PELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLL 82
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
++ W+ P +L ADA DVWL N RGN YS +H L P S +A+W++S DE+
Sbjct: 83 CASSDWVVNLPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKP-SHSAFWDWSWDEMA 141
Query: 483 YFDLPAILDYVLDRSRADVLNYVGFS 560
+DL A++++VL+ + D + Y+G S
Sbjct: 142 TYDLNAMINHVLEVTGQDSVYYMGHS 167
>AF022976-9|AAC69088.2| 404|Caenorhabditis elegans Hypothetical
protein R11G11.14 protein.
Length = 404
Score = 95.5 bits (227), Expect = 2e-20
Identities = 51/146 (34%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Frame = +3
Query: 135 PDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQRC----SRTQIPVLLVHGLL 302
P+ + ++ R GY ++V T+DG++L + R+ G+ + Q V + HGLL
Sbjct: 24 PELHMTTPQIIERWGYPAMIYSVTTDDGYILELHRIPHGKTNVTWPNGKQPVVFMQHGLL 83
Query: 303 QSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEIG 482
++ W P A++ ADA DVWL N RGN YS +H L S + +W +S DE+
Sbjct: 84 CASTDWTMNLPEQSAAFIFADAGFDVWLGNMRGNTYSMKHKNLKA-SHSDFWEWSWDEMA 142
Query: 483 YFDLPAILDYVLDRSRADVLNYVGFS 560
+DLPA++D VL+ + + L Y+G S
Sbjct: 143 TYDLPAMIDKVLEVTGQESLYYMGHS 168
>AL117200-4|CAB60584.1| 401|Caenorhabditis elegans Hypothetical
protein Y50E8A.7 protein.
Length = 401
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Frame = +3
Query: 138 DSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRVSSGQR------CSRTQIPVLLVHGL 299
+ L+ + + +GY E+H V T+DG+ + + R+ G+ CS+ + V +HGL
Sbjct: 20 EETLDAADTISHYGYTVEKHYVTTDDGYTVQLQRIPVGRDDRSILGCSKRPV-VFFMHGL 78
Query: 300 LQSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSADEI 479
S+ +L P AY+ ADA DVWL N RG Y H + + +WNFS E
Sbjct: 79 FGSSYHFLLNLPSQSAAYIFADAGFDVWLGNIRGTEYGLNHTSFSTNG-VNFWNFSLYEH 137
Query: 480 GYFDLPAILDYVLDRSRADVLNYVGFS 560
++DL ++YVLD +R + L YVG S
Sbjct: 138 SHYDLRQQIEYVLDYTRHESLFYVGHS 164
>Z81055-8|CAB02896.2| 409|Caenorhabditis elegans Hypothetical
protein F01G10.7 protein.
Length = 409
Score = 91.5 bits (217), Expect = 4e-19
Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 4/150 (2%)
Frame = +3
Query: 123 LGYPPDSLLNVTELATRHGYQCEEHNVVTEDGFVLTVFRV--SSGQRCSRT-QIPVLLV- 290
L + + V E+ GY+ E H V T D ++L + R+ ++C R+ + P++ +
Sbjct: 19 LAIDDECYMTVPEIGKHFGYESEVHLVRTTDEYILELHRIPCKQNEKCDRSSKRPIVFMQ 78
Query: 291 HGLLQSADSWLDAGPGSGLAYLLADACHDVWLSNTRGNYYSRRHLTLDPDSDAAYWNFSA 470
HGLL SW+ ++ ADA D+W++N+RG S++H+ P++ +WNF+
Sbjct: 79 HGLLADGFSWIPNLANQSAGFVFADAGFDIWIANSRGTPASQKHIGYGPENQ-KFWNFTW 137
Query: 471 DEIGYFDLPAILDYVLDRSRADVLNYVGFS 560
++ FDL A +D VL ++ + L Y+G S
Sbjct: 138 QQMSEFDLTASVDLVLKETKQEFLYYLGHS 167
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -1
Query: 385 SHTSWQASANR*ARPEPGPASSQESALCSRPCTSSTGICVREHRWPLDTRKTVSTNPSSV 206
SH+++ + A PG A+ +S+ +R S C R L+ R+ + ++ SS+
Sbjct: 1456 SHSAYLVGISHPAS-SPGRAALIDSSEVARSVESINASCQRVESRQLN-REELMSDISSI 1513
Query: 205 TTLCSSH*YPCRVASSVT 152
T SS CR+AS T
Sbjct: 1514 TKQSSSLAQLCRIASEKT 1531
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.9 bits (59), Expect = 5.3
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -1
Query: 385 SHTSWQASANR*ARPEPGPASSQESALCSRPCTSSTGICVREHRWPLDTRKTVSTNPSSV 206
SH+++ + A PG A+ +S+ +R S C R L+ R+ + ++ SS+
Sbjct: 1456 SHSAYLVGISHPAS-SPGRAALIDSSEVARSVESINASCQRVESRQLN-REELMSDISSI 1513
Query: 205 TTLCSSH*YPCRVASSVT 152
T SS CR+AS T
Sbjct: 1514 TKQSSSLAQLCRIASEKT 1531
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 27.5 bits (58), Expect = 7.0
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +1
Query: 94 CRYEMRPSGSWATRRTPC*T*RN*RPDTGISARSITWSRRTDSC*PFSACRAANGARVH- 270
C + P+ S + T T R RP+ G +T+S TDS +A + + + +H
Sbjct: 312 CSFVTEPTPSSTSSETTPETTRKSRPNPGKPTPDVTYSSSTDST---TAITSHSTSELHD 368
Query: 271 RSQCCSCTVCCRALTLGWTRGPAPASPTCWQTLATTCGSPTLAATTTRGAT 423
S T ++T +GP + T +T+ + T TT +G+T
Sbjct: 369 YSPTFKSTESTTSVTQTTEKGP-DSDDTSPVGSSTSSSAFTSEKTTKKGST 418
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 311 SALQQTVHEQHWDLCTRAPLAARHAENGQHESVL 210
SAL +H +W+ C A R G+ SVL
Sbjct: 679 SALPNILHASYWESCDVASFLLRQFVRGEENSVL 712
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 311 SALQQTVHEQHWDLCTRAPLAARHAENGQHESVL 210
SAL +H +W+ C A R G+ SVL
Sbjct: 679 SALPNILHASYWESCDVASFLLRQFVRGEENSVL 712
>AF038619-3|AAO91713.1| 126|Caenorhabditis elegans Hypothetical
protein F56A11.7 protein.
Length = 126
Score = 27.5 bits (58), Expect = 7.0
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Frame = +3
Query: 234 FRVSSGQRCSRTQIPVLLVHGLLQSADSWLDAGPG--SGLAYLLADAC--HDVWLSNTRG 401
F +S QR SR+ GLL + + + G S Y L C D++LS+ G
Sbjct: 10 FNLSKTQRSSRSSGLKAQGSGLLHALLNQKEKGASVISNANYFLTLTCVLQDLYLSSCHG 69
Query: 402 NYYSRRHL 425
N Y R L
Sbjct: 70 NEYGHRDL 77
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 280 TGICVREHRWPLDTRKTVSTNPSSVTTLCSSH 185
T + EH P + K +T+P+ VTT+ S H
Sbjct: 5471 TSVTTVEHVEPAEIHKYRTTSPTIVTTVSSEH 5502
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 280 TGICVREHRWPLDTRKTVSTNPSSVTTLCSSH 185
T + EH P + K +T+P+ VTT+ S H
Sbjct: 5471 TSVTTVEHVEPAEIHKYRTTSPTIVTTVSSEH 5502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,667,747
Number of Sequences: 27780
Number of extensions: 205813
Number of successful extensions: 776
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 758
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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