Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27o24
(495 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 172 1e-43
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 149 8e-37
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 147 4e-36
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 147 4e-36
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 122 1e-28
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 116 1e-26
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 90 9e-19
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 87 9e-18
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 83 8e-17
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 80 8e-16
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 71 4e-13
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 71 4e-13
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 68 4e-12
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 57 6e-09
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 57 6e-09
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 50 9e-07
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 50 9e-07
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 49 2e-06
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 49 2e-06
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 48 5e-06
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 48 5e-06
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 48 5e-06
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 48 5e-06
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 48 5e-06
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 48 5e-06
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 48 5e-06
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 48 5e-06
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 46 1e-05
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 45 3e-05
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 45 3e-05
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 44 5e-05
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 44 5e-05
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 44 6e-05
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 40 7e-04
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 40 7e-04
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 40 0.001
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 40 0.001
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 39 0.002
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 39 0.002
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 39 0.002
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 38 0.004
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 37 0.007
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 36 0.012
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 36 0.016
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 36 0.016
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 36 0.016
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 36 0.021
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 36 0.021
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 36 0.021
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 36 0.021
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 35 0.028
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 35 0.028
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 35 0.028
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 35 0.037
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 35 0.037
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 33 0.11
AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeri... 33 0.11
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 33 0.11
AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, al... 33 0.11
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 32 0.20
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 32 0.20
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 32 0.26
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 32 0.26
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 32 0.26
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 32 0.26
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 32 0.26
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 32 0.26
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 32 0.26
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 32 0.26
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 31 0.35
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 31 0.35
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 31 0.35
Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical pr... 31 0.61
M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha... 31 0.61
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 31 0.61
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 30 0.80
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 30 0.80
Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical pr... 30 1.1
AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein. 30 1.1
AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeri... 30 1.1
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical pr... 29 1.4
AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeri... 29 1.4
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 29 1.4
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 29 1.4
Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical p... 29 1.9
U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein. 29 1.9
Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical pr... 28 4.3
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 28 4.3
L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy ... 28 4.3
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 28 4.3
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 27 5.7
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 27 5.7
AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical ... 27 5.7
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 27 9.9
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 27 9.9
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 27 9.9
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 27 9.9
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 27 9.9
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 172 bits (419), Expect = 1e-43
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = +3
Query: 240 MGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFN 419
MGK LSKIFG KE+RILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN+KFN
Sbjct: 1 MGKFLSKIFGKKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFN 60
Query: 420 VWDVGGQDKIRPLWRHYYXGTQGLI 494
VWDVGGQDKIRPLWRHYY GTQ LI
Sbjct: 61 VWDVGGQDKIRPLWRHYYTGTQALI 85
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 149 bits (362), Expect = 8e-37
Identities = 66/84 (78%), Positives = 73/84 (86%)
Frame = +3
Query: 243 GKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNV 422
G L +FG +EMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F V
Sbjct: 6 GSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTV 65
Query: 423 WDVGGQDKIRPLWRHYYXGTQGLI 494
WDVGGQDKIRPLWRHY+ TQGLI
Sbjct: 66 WDVGGQDKIRPLWRHYFQNTQGLI 89
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 147 bits (356), Expect = 4e-36
Identities = 63/87 (72%), Positives = 76/87 (87%)
Frame = +3
Query: 234 VNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVK 413
+ + L +++FG +++RILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+
Sbjct: 3 LTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 414 FNVWDVGGQDKIRPLWRHYYXGTQGLI 494
F VWDVGGQDKIRPLWRHY+ TQGLI
Sbjct: 63 FTVWDVGGQDKIRPLWRHYFQNTQGLI 89
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 147 bits (356), Expect = 4e-36
Identities = 63/87 (72%), Positives = 76/87 (87%)
Frame = +3
Query: 234 VNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVK 413
+ + L +++FG +++RILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+
Sbjct: 3 LTISSLFNRLFGKRQVRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIS 62
Query: 414 FNVWDVGGQDKIRPLWRHYYXGTQGLI 494
F VWDVGGQDKIRPLWRHY+ TQGLI
Sbjct: 63 FTVWDVGGQDKIRPLWRHYFQNTQGLI 89
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 122 bits (294), Expect = 1e-28
Identities = 53/78 (67%), Positives = 64/78 (82%)
Frame = +3
Query: 261 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQ 440
+FG +EMRIL+LGLD AGKTTILY+L++G+ VTTIPT+GFNVE V YKN+KF VWD+GGQ
Sbjct: 11 LFGAREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVEQVEYKNLKFQVWDLGGQ 70
Query: 441 DKIRPLWRHYYXGTQGLI 494
IRP WR YY T +I
Sbjct: 71 TSIRPYWRCYYANTDAII 88
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 116 bits (278), Expect = 1e-26
Identities = 52/83 (62%), Positives = 64/83 (77%)
Frame = +3
Query: 246 KLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVW 425
K+ S +F N E R LMLGLD AGKTTILYKLKL ++V TIPT+GFNVETVT++ + VW
Sbjct: 7 KISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVW 66
Query: 426 DVGGQDKIRPLWRHYYXGTQGLI 494
DVGGQ KIR LW++Y+ T L+
Sbjct: 67 DVGGQKKIRALWKYYFPNTTTLV 89
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 89.8 bits (213), Expect = 9e-19
Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Frame = +3
Query: 276 EMRILMLGLDAAGKTTILYKLKLGQSVTTI---PTVGFNVETVTYKNVKFNVWDVGGQDK 446
E R+++LGLD AGKT+I+ +LK Q T + PT+GFN+ET+ YKN + N WDVGG K
Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPK 428
Query: 447 IRPLWRHYYXGTQGL 491
+R LW+HYY Q +
Sbjct: 429 LRHLWKHYYSNAQAI 443
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 86.6 bits (205), Expect = 9e-18
Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
Frame = +3
Query: 240 MGKLLSKIFGN----KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN 407
MG +++K+F + K+ +I+++GLD AGKTTILY V T PT+G NVE V+Y+N
Sbjct: 1 MGLIMAKLFQSWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRN 60
Query: 408 VKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ F +WD+GGQ+ +R W YY T +I
Sbjct: 61 LDFVIWDIGGQESLRKSWSTYYVQTDVVI 89
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 83.4 bits (197), Expect = 8e-17
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIR 452
+EMRIL+LGLD AGKTT++ K + T PT+GF+++TV +K+ + N+WDVGGQ +R
Sbjct: 15 REMRILILGLDNAGKTTLMKKFLDEPTDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLR 74
Query: 453 PLWRHYYXGTQGLI 494
W++Y+ T LI
Sbjct: 75 SYWKNYFESTDALI 88
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 80.2 bits (189), Expect = 8e-16
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETV-TYKNVKFNVWDVGGQDKI 449
+E+RIL+LGLD AGKTTIL +L PT GFNV+TV +++ NVWD+GGQ I
Sbjct: 16 REIRILLLGLDNAGKTTILKQLSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGGQRSI 75
Query: 450 RPLWRHYYXGTQGLI 494
RP W +YY LI
Sbjct: 76 RPYWSNYYENIDTLI 90
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 71.3 bits (167), Expect = 4e-13
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 252 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWD 428
+ +F +EM + ++GL +GKTT + + GQ + IPTVGFN+ +T NV +WD
Sbjct: 12 IRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWD 71
Query: 429 VGGQDKIRPLWRHYYXGTQGLI 494
+GGQ + R +W Y G ++
Sbjct: 72 IGGQPRFRSMWERYCRGVNAIV 93
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 71.3 bits (167), Expect = 4e-13
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +3
Query: 252 LSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWD 428
+ +F +EM + ++GL +GKTT + + GQ + IPTVGFN+ +T NV +WD
Sbjct: 12 IRSLFWKEEMELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFNMRKITKGNVTIKLWD 71
Query: 429 VGGQDKIRPLWRHYYXGTQGLI 494
+GGQ + R +W Y G ++
Sbjct: 72 IGGQPRFRSMWERYCRGVNAIV 93
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 67.7 bits (158), Expect = 4e-12
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = +3
Query: 252 LSKIFG--NKEMRILMLGLDAAGKTTILYKLKLGQ--SVTTIPTVGFNVETVTYKNVKFN 419
LS +FG K++ I+++GLD +GKTTIL +LK + S +PTVG V + +N+ F+
Sbjct: 7 LSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFH 66
Query: 420 VWDVGGQDKIRPLWRHYYXGTQGLI 494
+D+ GQ K R W Y+ +QG+I
Sbjct: 67 AFDMAGQMKYRSTWESYFHSSQGVI 91
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 57.2 bits (132), Expect = 6e-09
Identities = 24/75 (32%), Positives = 44/75 (58%)
Frame = +3
Query: 270 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 449
NK+ +++ LGLD AGKTT+L+ LK + +PT+ E ++ + F +D+GG +
Sbjct: 19 NKKGKLVFLGLDNAGKTTLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQA 78
Query: 450 RPLWRHYYXGTQGLI 494
R +W+ Y+ ++
Sbjct: 79 RRVWKDYFPAVDAVV 93
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 57.2 bits (132), Expect = 6e-09
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Frame = +3
Query: 258 KIFGNKEMRILMLGLDAAGKTTILYKLK---------LGQSVTTIPTVGFNVETVTYKNV 410
K F K+ ++++GLD AGKTT L + K L S T TVG N V N
Sbjct: 11 KFFKKKDYYVVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITA-TVGLNTGNVELNNT 69
Query: 411 KFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ WD+GGQ+ +R LW YY +I
Sbjct: 70 CLHFWDLGGQESLRELWATYYDDANAMI 97
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 50.0 bits (114), Expect = 9e-07
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTYKN--VKFNVWDVGGQDK 446
++L++G GKT ILY+ TT I T+G F ++T+ K +K +WD GQ++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 447 IRPLWRHYYXGTQGLI 494
+ YY G G++
Sbjct: 71 FHTITTSYYRGAMGIM 86
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 50.0 bits (114), Expect = 9e-07
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTYKN--VKFNVWDVGGQDK 446
++L++G GKT ILY+ TT I T+G F ++T+ K +K +WD GQ++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQER 70
Query: 447 IRPLWRHYYXGTQGLI 494
+ YY G G++
Sbjct: 71 FHTITTSYYRGAMGIM 86
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY-KNVKFNVWDVGGQDKI 449
+E+++ G+ +AGKTT L LK + T GF+ + Y + ++DVGG I
Sbjct: 23 REIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGI 82
Query: 450 RPLWRHYYXGTQGLI 494
R +W +YY G+I
Sbjct: 83 RGIWSNYYAEVHGII 97
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY-KNVKFNVWDVGGQDKI 449
+E+++ G+ +AGKTT L LK + T GF+ + Y + ++DVGG I
Sbjct: 23 REIKLGCFGIGSAGKTTFLKVLKGEDPRDLLRTNGFSTVKMEYDETFHLTIYDVGGDKGI 82
Query: 450 RPLWRHYYXGTQGLI 494
R +W +YY G+I
Sbjct: 83 RGIWSNYYAEVHGII 97
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT--IPTVG--FNVETVTY--KNVKFNVWDVGGQD 443
++L++G + GKT+ L++ S T+ + TVG F V+TV K VK +WD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRY-CDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R + YY G G I
Sbjct: 83 RYRTITTAYYRGAMGFI 99
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT--IPTVG--FNVETVTY--KNVKFNVWDVGGQD 443
++L++G + GKT+ L++ S T+ + TVG F V+TV K VK +WD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRY-CDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R + YY G G I
Sbjct: 83 RYRTITTAYYRGAMGFI 99
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVKFNVWDVGGQDK 446
++L++G GKT +L++ + + I T+G F + T+ K +K +WD GQ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 447 IRPLWRHYYXGTQGLI 494
R + YY G G+I
Sbjct: 70 FRTITTAYYRGAMGII 85
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT--IPTVG--FNVETVTY--KNVKFNVWDVGGQD 443
++L++G + GKT+ L++ S T+ + TVG F V+TV K VK +WD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRY-CDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R + YY G G I
Sbjct: 83 RYRTITTAYYRGAMGFI 99
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT--IPTVG--FNVETVTY--KNVKFNVWDVGGQD 443
++L++G + GKT+ L++ S T+ + TVG F V+TV K VK +WD GQ+
Sbjct: 38 KLLIIGNSSVGKTSFLFRY-CDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 96
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R + YY G G I
Sbjct: 97 RYRTITTAYYRGAMGFI 113
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVKFNVWDVGGQDK 446
++L++G GKT +L++ + + I T+G F + T+ K +K +WD GQ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 447 IRPLWRHYYXGTQGLI 494
R + YY G G+I
Sbjct: 70 FRTITTAYYRGAMGII 85
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTY--KNVKFNVWDVGGQDK 446
++L++G GKT +L++ + + I T+G F + T+ K +K +WD GQ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQER 69
Query: 447 IRPLWRHYYXGTQGLI 494
R + YY G G+I
Sbjct: 70 FRTITTAYYRGAMGII 85
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 47.6 bits (108), Expect = 5e-06
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT--IPTVG--FNVETVTY--KNVKFNVWDVGGQD 443
++L++G + GKT+ L++ S T+ + TVG F V+TV K VK +WD GQ+
Sbjct: 24 KLLIIGNSSVGKTSFLFRY-CDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R + YY G G I
Sbjct: 83 RYRTITTAYYRGAMGFI 99
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSV----TTIPTVGFNVETVTY--KNVKFNVWDVGGQD 443
+I+++G GKT ++ + + G V TTI V F ++T+ K VK +WD GGQ+
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIG-VDFTMKTLVVDGKRVKLQIWDTGGQE 70
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R + + YY G++
Sbjct: 71 RFRTITQSYYRSANGIV 87
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPT---VGFNVETVTY--KNVKFNVWDVGG 437
+ RI+M G A GK++ + ++ Q +P+ V F+V+TV +NV +WD G
Sbjct: 460 RTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVALQLWDTAG 519
Query: 438 QDKIRPLWRHYYXGTQGLI 494
Q++ R L + Y+ G I
Sbjct: 520 QERFRSLCKSYFRRADGAI 538
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 44.8 bits (101), Expect = 3e-05
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVET--VTYKNVKFNVWDVGGQDK 446
++L++G GK+++L + S I T+G F + T + + VK +WD GQ++
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQER 71
Query: 447 IRPLWRHYYXGTQGLI 494
R + YY GT G++
Sbjct: 72 FRTITSTYYRGTHGVV 87
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 279 MRILMLGLDAAGKTTILYKLKLGQSVTT--IPTVGFNVE----TVTYKNVKFNVWDVGGQ 440
+++++LG GKT +L + K G + I TVG + T+ K VK +WD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 441 DKIRPLWRHYYXGTQGLI 494
++ R + YY L+
Sbjct: 63 ERFRSVTTSYYRDADALL 80
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Frame = +3
Query: 279 MRILMLGLDAAGKTTILYKLKLGQSVTT--IPTVGFNVE----TVTYKNVKFNVWDVGGQ 440
+++++LG GKT +L + K G + I TVG + T+ K VK +WD GQ
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKVKLQIWDTAGQ 62
Query: 441 DKIRPLWRHYYXGTQGLI 494
++ R + YY L+
Sbjct: 63 ERFRSVTTSYYRDADALL 80
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY--KNVKFNVWDVGGQDK 446
++L++G GK+ +L + + I T+G F + T+ K +K +WD GQ++
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 72
Query: 447 IRPLWRHYYXGTQGLI 494
R + YY G G+I
Sbjct: 73 FRTITSSYYRGAHGII 88
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Frame = +3
Query: 276 EMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVG--FNVETVTYKN--VKFNVWDVGGQ 440
+ ++++LG A GK++++ + GQ T+G F +TV + +KF +WD GQ
Sbjct: 19 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEIWDTAGQ 78
Query: 441 DKIRPLWRHYYXGTQGLI 494
++ L YY G Q I
Sbjct: 79 ERYHSLAPMYYRGAQAAI 96
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Frame = +3
Query: 276 EMRILMLGLDAAGKTTILYKLKLGQSVT-TIPTVGFN-----VETVTYKNVKFNVWDVGG 437
+ R++++G GK+++L G+ + PTVG + +E VK +WD G
Sbjct: 17 QYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQLWDTAG 76
Query: 438 QDKIRPLWRHYYXGTQGLI 494
Q+K R + + YY + G++
Sbjct: 77 QEKFRSITKSYYRNSVGVL 95
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 40.3 bits (90), Expect = 7e-04
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Frame = +3
Query: 279 MRILMLGLDAAGKTTILYKLKLG----QSVTTIPTVGFNVETVTY--KNVKFNVWDVGGQ 440
++IL++G GK++++ + + TI V F V ++ VK +WD GQ
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIG-VDFRVTSMAIDGNRVKLAIWDTAGQ 70
Query: 441 DKIRPLWRHYYXGTQGLI 494
++ R L YY G QG+I
Sbjct: 71 ERFRTLTPSYYRGAQGVI 88
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
IPT+G +T+ K KF ++DVGGQ R W H + I
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATI 224
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTTIP-TVGFNVET----VTYKNVKFNVWDVGGQDK 446
+ +++G GK+ +L++ + + P T+G T V+ + +K +WD GQ++
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQER 72
Query: 447 IRPLWRHYYXGTQGLI 494
R + R YY G G +
Sbjct: 73 FRAVTRSYYRGAAGAL 88
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
IPT+G +T+ K KF ++DVGGQ R W H + I
Sbjct: 181 IPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATI 224
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKL--KLGQSVTTIPTVG--FNVETVTY--KNVKFNVWDVGGQD 443
+ +++G GK+ +L + K Q V + T+G F VT K +K +WD GQ+
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDL-TIGVEFGARMVTIDGKQIKLQIWDTAGQE 66
Query: 444 KIRPLWRHYYXGTQGLI 494
R + R YY G G +
Sbjct: 67 SFRSITRSYYRGAAGAL 83
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLG-----QSVTTIPTVGFNVETVTYKN--VKFNVWDVGGQ 440
+++++G GKT ++ K G QS T V F ++TV N +K +WD GQ
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQSATI--GVDFMIKTVKVGNDKIKLQIWDTAGQ 66
Query: 441 DKIRPLWRHYYXGTQGLI 494
++ R + + YY ++
Sbjct: 67 ERFRSITQSYYRSAHAIV 84
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNVKFNVWDVGGQDK 446
+++++G GK+ +L + + ++ + T+G T V K VK +WD GQ++
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 447 IRPLWRHYYXGTQGLI 494
R + YY G G +
Sbjct: 73 YRAITSAYYRGAVGAL 88
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNVKFNVWDVGGQDK 446
+++++G GK+ +L + + + + T+G T V K VK +WD GQ++
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQER 72
Query: 447 IRPLWRHYYXGTQGLI 494
R + YY G G +
Sbjct: 73 YRAITSAYYRGAVGAL 88
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.005
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +3
Query: 267 GNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKN----VKFNVWDV 431
G +++++G GKTT + + G+ + T+G V + + ++FNVWD
Sbjct: 6 GIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDT 65
Query: 432 GGQDKIRPLWRHYY 473
GQ+K L YY
Sbjct: 66 AGQEKFGGLRDGYY 79
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVET----VTYKNVKFNVWDVGGQDK 446
+I+++G GK+ +L + + ++ + PT+G T V K VK +WD G ++
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGMER 69
Query: 447 IRPLWRHYYXGTQGLI 494
R YY G G +
Sbjct: 70 FRCGASSYYRGALGAL 85
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 36.3 bits (80), Expect = 0.012
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 408 VKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
VK +WD GQ++ R L YY G QG+I
Sbjct: 33 VKLAIWDTAGQERFRTLTPSYYRGAQGVI 61
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T + T G T+KN+ F ++DVGGQ R W H + +I
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAII 223
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/24 (37%), Positives = 20/24 (83%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKL 344
K++++L+LG +GK+TI+ ++K+
Sbjct: 32 KDIKLLLLGAGESGKSTIVKQMKI 55
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T + T G T+KN+ F ++DVGGQ R W H + +I
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAII 223
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/24 (37%), Positives = 20/24 (83%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKL 344
K++++L+LG +GK+TI+ ++K+
Sbjct: 32 KDIKLLLLGAGESGKSTIVKQMKI 55
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 35.9 bits (79), Expect = 0.016
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T + T G T+KN+ F ++DVGGQ R W H + +I
Sbjct: 178 TRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAII 223
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/24 (37%), Positives = 20/24 (83%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKL 344
K++++L+LG +GK+TI+ ++K+
Sbjct: 32 KDIKLLLLGAGESGKSTIVKQMKI 55
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T +PT+G T K F V+DVGGQ R W H + + +I
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMI 223
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 198 RRLVLLCG*GKLVNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVG 377
R LV K++N +K +++L+LG +GK+T+L ++K+ I G
Sbjct: 7 RELVAQAKQNKIINTELDKAKKTDENIIKLLLLGAGESGKSTVLKQMKI------IHNSG 60
Query: 378 FNVETVTYK 404
F+ E ++ K
Sbjct: 61 FSQEEISNK 69
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G + KN F ++DVGGQ R W H + Q ++
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVL 233
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 35.5 bits (78), Expect = 0.021
Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +3
Query: 276 EMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTV--GFNVETVTYKNVK--FNVWDVGGQ 440
+ +I++LG GK++++ + + S + T+ F +TV ++ + ++WD GQ
Sbjct: 12 KFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQ 71
Query: 441 DKIRPLWRHYYXGTQGLI 494
+K L YY G+ G++
Sbjct: 72 EKYHALGPIYYRGSNGVL 89
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T +PT+G T K F V+DVGGQ R W H + + +I
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMI 223
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 198 RRLVLLCG*GKLVNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVG 377
R LV K++N +K +++L+LG +GK+T+L ++K+ I G
Sbjct: 7 RELVAQAKQNKIINTELDKAKKTDENIIKLLLLGAGESGKSTVLKQMKI------IHNSG 60
Query: 378 FNVETVTYK 404
F+ E ++ K
Sbjct: 61 FSQEEISNK 69
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 35.5 bits (78), Expect = 0.021
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G + KN F ++DVGGQ R W H + Q ++
Sbjct: 190 VPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVL 233
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 35.5 bits (78), Expect = 0.021
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T +PT+G T K F V+DVGGQ R W H + + +I
Sbjct: 178 TRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMI 223
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = +3
Query: 198 RRLVLLCG*GKLVNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVG 377
R LV K++N +K +++L+LG +GK+T+L ++K+ I G
Sbjct: 7 RELVAQAKQNKIINTELDKAKKTDENIIKLLLLGAGESGKSTVLKQMKI------IHNSG 60
Query: 378 FNVETVTYK 404
F+ E ++ K
Sbjct: 61 FSQEEISNK 69
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 35.1 bits (77), Expect = 0.028
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3
Query: 336 LKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
L L T I VGF + K VKF V+DVGGQ R W H + +I
Sbjct: 178 LLLRTKTTGIVEVGFEI-----KKVKFRVFDVGGQRSERKKWIHCFEDVNAII 225
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 35.1 bits (77), Expect = 0.028
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3
Query: 336 LKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
L L T I VGF + K VKF V+DVGGQ R W H + +I
Sbjct: 178 LLLRTKTTGIVEVGFEI-----KKVKFRVFDVGGQRSERKKWIHCFEDVNAII 225
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 35.1 bits (77), Expect = 0.028
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = +3
Query: 336 LKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
L L T I VGF + K VKF V+DVGGQ R W H + +I
Sbjct: 178 LLLRTKTTGIVEVGFEI-----KKVKFRVFDVGGQRSERKKWIHCFEDVNAII 225
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 34.7 bits (76), Expect = 0.037
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +3
Query: 264 FGN--KEMRILMLGLDAAGKTTILYKLKLGQSVTTIP-TVGFNVETVTY----KNVKFNV 422
FGN K+ +++ LG + GKT+++ + T T+G + + T + V+ +
Sbjct: 4 FGNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQL 63
Query: 423 WDVGGQDKIRPLWRHY 470
WD GQ++ R L Y
Sbjct: 64 WDTAGQERFRSLIPSY 79
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +3
Query: 270 NKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYK----NVKFNVWDVG 434
N +I+++G GK+ IL + + I T+G + + T K ++ +WD
Sbjct: 4 NHLFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDTA 63
Query: 435 GQDKIRPLWRHYYXGTQGLI 494
G ++ R ++ YY G++
Sbjct: 64 GMERYRTIYNSYYHSAHGVM 83
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 33.1 bits (72), Expect = 0.11
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTTI-PTV-----GFNVETVTYKNVKFNVWDVGGQD 443
+ +++G GK+ +L + +G+ +I P+ GF + K VK +VWD GQ+
Sbjct: 8 KYVIIGDRGVGKSNLLLRF-IGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQE 66
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R L YY G +
Sbjct: 67 RFRSLVGSYYRHAIGAL 83
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIP-TVGFNVETVTY----KNVKFNVWDVGG 437
K+ +++ LG + GKT+I+ + T T+G + + T + ++ +WD G
Sbjct: 10 KKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAG 69
Query: 438 QDKIRPLWRHY 470
Q++ R L Y
Sbjct: 70 QERFRSLIPSY 80
>AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T I T G YK+ F V+DVGGQ R W H + LI
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDVTALI 222
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTTI-PTVG--FNVETVTY---KNVKFNVWDVGGQD 443
+++ +G A GKT L++ + T+G F V+T+ + + +WD GQ+
Sbjct: 204 KVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQE 263
Query: 444 KIRPLWRHYYXGTQGLI 494
+ R + + Y+ G++
Sbjct: 264 RFRSITKQYFRKADGVV 280
>AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, alpha
subunit protein 16 protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.11
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T I T G YK+ F V+DVGGQ R W H + LI
Sbjct: 177 TRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDVTALI 222
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYY 473
I T G N YK + F + DVGGQ R W H +
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCF 226
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYY 473
I T G N YK + F + DVGGQ R W H +
Sbjct: 190 ISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCF 226
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYY 473
+PT G V N+K + D GGQ R W H++
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFF 218
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 31.9 bits (69), Expect = 0.26
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 354 VTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
++ I T G K+V F V+DVGGQ R W H + +I
Sbjct: 177 LSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAII 223
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 31.9 bits (69), Expect = 0.26
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYY 473
+PT G V N+K + D GGQ R W H++
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFF 218
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ + G T YK++ F ++DVGGQ R W H + +I
Sbjct: 182 VKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFDSVTAVI 225
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 31.9 bits (69), Expect = 0.26
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 354 VTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
++ I T G K+V F V+DVGGQ R W H + +I
Sbjct: 177 LSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAII 223
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Frame = +3
Query: 279 MRILMLGLDAAGKTTILYKLK----LGQSVTTIPTVGFNVETVTYKN-----------VK 413
++ L LG GKT+ L++ GQ ++T+ + F + V YK+ V
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVG-IDFKEKKVVYKSSRGGFGGRGQRVL 66
Query: 414 FNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+WD GQ++ R L ++ G I
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAMGFI 93
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 31.9 bits (69), Expect = 0.26
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ + G T YK++ F ++DVGGQ R W H + +I
Sbjct: 182 VKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFDSVTAVI 225
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 31.9 bits (69), Expect = 0.26
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Frame = +3
Query: 279 MRILMLGLDAAGKTTILYKLK----LGQSVTTIPTVGFNVETVTYKN-----------VK 413
++ L LG GKT+ L++ GQ ++T+ + F + V YK+ V
Sbjct: 8 IKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVG-IDFKEKKVVYKSSRGGFGGRGQRVL 66
Query: 414 FNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+WD GQ++ R L ++ G I
Sbjct: 67 LQLWDTAGQERFRSLTTAFFRDAMGFI 93
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T I T G K + F V DVGGQ R W H + +I
Sbjct: 176 TRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAII 221
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 31.5 bits (68), Expect = 0.35
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVET----VTYKN----VKFNVWDVG 434
++++LG GKT+I+Y+ + G + T+G + + Y++ V+ VWD
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTA 113
Query: 435 GQDKIR 452
GQ++ R
Sbjct: 114 GQERFR 119
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 31.5 bits (68), Expect = 0.35
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +3
Query: 357 TTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
T I T G K + F V DVGGQ R W H + +I
Sbjct: 176 TRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAII 221
>Z78016-2|CAB01443.1| 240|Caenorhabditis elegans Hypothetical
protein R186.3 protein.
Length = 240
Score = 31.1 bits (67), Expect = 0.46
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +3
Query: 225 GKLVNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKL--KLGQSVTTIPTVGFNVE--- 389
G L + +L + + R+L +GL GKTTI +L K + TT T VE
Sbjct: 21 GLLTVLLLVLKSFASSNKNRVLFVGLMDCGKTTIFTQLSQKEAEYPTTTKTYTSMVENKI 80
Query: 390 TVTYKNVKFNVWDVGGQDKIR 452
T+ K+ + + D G D++R
Sbjct: 81 TLRIKDKEKEIIDYPGNDRLR 101
>Z66500-4|CAA91305.2| 630|Caenorhabditis elegans Hypothetical
protein T05C12.4 protein.
Length = 630
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 45 CVFCFDCFEWMLDIVICDCHVAMCACC*ISNHQCDRIVATNQQS 176
C+ F CF + CH +CA + N Q +V TN QS
Sbjct: 494 CMLVFSCFT----LFYTHCHELLCATIQLQNQQARGLVDTNHQS 533
>M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 354
Score = 30.7 bits (66), Expect = 0.61
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 354 VTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
++ I T G K+V F V DVGGQ R W H + +I
Sbjct: 177 LSRIKTTGIVEVKFQMKSVDFRVLDVGGQRSERKKWIHCFEDVNAII 223
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Frame = +3
Query: 273 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIP--TVGFN-----VETVTYKNVKFNVWDV 431
K ++++++G AGKT +L L + T P T+G + V+ ++++ +WD
Sbjct: 5 KTVKVVVVGESGAGKTALLTCF-LDNTFETDPLTTIGIDFKHKIVQLNDGQSIRLQLWDT 63
Query: 432 GGQDKIRPL 458
GQ++ R L
Sbjct: 64 AGQERFRQL 72
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 30.3 bits (65), Expect = 0.80
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLK---LGQSVTTIPTVGFNVETVTYKN---VKFNVWDVGGQD 443
++L++G GKT+I+ + + T V F ++ + V +WD+ GQD
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQD 72
Query: 444 KIRPLWRHYYXGTQGLI 494
+ + R YY I
Sbjct: 73 RYGVMTRVYYKDAHAAI 89
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 30.3 bits (65), Expect = 0.80
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLK---LGQSVTTIPTVGFNVETVTYKN---VKFNVWDVGGQD 443
++L++G GKT+I+ + + T V F ++ + V +WD+ GQD
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVDENTVVHLQIWDISGQD 72
Query: 444 KIRPLWRHYYXGTQGLI 494
+ + R YY I
Sbjct: 73 RYGVMTRVYYKDAHAAI 89
>Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical
protein C34D1.3 protein.
Length = 356
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein.
Length = 350
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein.
Length = 342
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+ T G K + F V+DVGGQ R W H + + +I
Sbjct: 181 VATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESII 224
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKL--KLGQSV-TTIPTVGFNVETVT---YKNVKFNVWDVGGQD 443
+ +++G GK+ +L + +L + TT V F + + YK V+ VWD GQ+
Sbjct: 8 KYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYK-VRLRVWDTCGQE 66
Query: 444 KIRPLWRHYYXGTQGLI 494
R + R YY G +
Sbjct: 67 NFRSIIRAYYRNALGAL 83
>Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGL 491
+PT G T N F ++D+GGQ R W Y G +
Sbjct: 180 VPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAI 222
>Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGL 491
+PT G T N F ++D+GGQ R W Y G +
Sbjct: 180 VPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAI 222
>AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 348
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGL 491
+PT G T N F ++D+GGQ R W Y G +
Sbjct: 180 VPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAI 222
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G +K + DVGGQ + W H + G++
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVL 219
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 231 LVNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKL 344
L+N KI K ++IL+LG GK+TI ++K+
Sbjct: 12 LINRQLEKEKIDSKKMLKILLLGGPECGKSTIFKQMKI 49
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G +K + DVGGQ + W H + G++
Sbjct: 176 VPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVL 219
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 231 LVNMGKLLSKIFGNKEMRILMLGLDAAGKTTILYKLKL 344
L+N KI K ++IL+LG GK+TI ++K+
Sbjct: 12 LINRQLEKEKIDSKKMLKILLLGGPECGKSTIFKQMKI 49
>Z79755-10|CAB02109.1| 2034|Caenorhabditis elegans Hypothetical
protein F43G9.6 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +3
Query: 18 CTNRGCGL-CCVFCFD 62
CT RGC CC+FCF+
Sbjct: 1848 CTRRGCLCKCCIFCFE 1863
>U57652-1|AAB02243.1| 2034|Caenorhabditis elegans FER-1 protein.
Length = 2034
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +3
Query: 18 CTNRGCGL-CCVFCFD 62
CT RGC CC+FCF+
Sbjct: 1848 CTRRGCLCKCCIFCFE 1863
>Z70682-6|CAH60781.2| 401|Caenorhabditis elegans Hypothetical
protein F08G5.7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 164 SCDDSITLVVAYLTACTHSHMTIANYNV*HPLKTVKTKNTAQTTSTIRT 18
SCD+SI ++ Y T S T+ T+KT T T +T+ T
Sbjct: 189 SCDESIQIICKYCPRETTSTTTVTPTTT--KAATIKTSTTTVTPTTVTT 235
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +3
Query: 279 MRILMLGLDAAGKTTILYK-LKLGQSVTTIPTVGFNVET----VTYKNVKFNVWDVGGQD 443
+++++LG GKT+++ + + S T+G + T + + V +WD GQ+
Sbjct: 10 LKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWDTAGQE 69
Query: 444 KIRPLWRHYYXG 479
+ + L +Y G
Sbjct: 70 RFQSLGVAFYRG 81
>Z68880-1|CAA93098.1| 652|Caenorhabditis elegans Hypothetical
protein T14G10.1 protein.
Length = 652
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 267 GNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTY---KNVKFNVWDVGG 437
G + I GL AGKTTI + L+ + IP G + + + + KN+ F+ D
Sbjct: 53 GFRGCTIWFTGLSGAGKTTISFALERTLNKLGIPCYGLDGDNIRHGLCKNLGFSKED--R 110
Query: 438 QDKIR 452
Q+ IR
Sbjct: 111 QENIR 115
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 270 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNV-WDVGGQDK 446
N++ IL+LG+ +GKTT + +L P N++ K V + V D+ K
Sbjct: 28 NQKPSILVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSK-VPYPVNVDIRDTVK 86
Query: 447 IRPLWRHYYXGTQGLI 494
+ + + + G G I
Sbjct: 87 YKEVMKEFGMGPNGAI 102
>L14324-7|AAA28181.2| 565|Caenorhabditis elegans Prolyl carboxy
peptidase like protein1 protein.
Length = 565
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 309 AGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFN--VWDVGGQDKIRPLWRHYYXGT 482
A + + L+K KL Q + NV+TV YKN+K + W +R +W + +
Sbjct: 17 ASRRSRLFK-KLYQKASNYDAAPSNVQTVWYKNMKLDHFTWGDTRTFDMRVMWNNTFYKP 75
Query: 483 QGLI 494
G I
Sbjct: 76 GGPI 79
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +3
Query: 270 NKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNV-WDVGGQDK 446
N++ IL+LG+ +GKTT + +L P N++ K V + V D+ K
Sbjct: 28 NQKPSILVLGMAGSGKTTFVQRLTAFLHARKTPPYVINLDPAVSK-VPYPVNVDIRDTVK 86
Query: 447 IRPLWRHYYXGTQGLI 494
+ + + + G G I
Sbjct: 87 YKEVMKEFGMGPNGAI 102
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +3
Query: 270 NKEMRILMLGLDAAGKTT---ILYKLKLGQSVTTI-PTVGFNVETVTYK-NVKFNVWDVG 434
+ + ++L++G +GKT+ I++ + + + + PT+ V + N+ ++WD G
Sbjct: 2 SSKRKVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFLGNMVLHLWDCG 61
Query: 435 GQD 443
GQ+
Sbjct: 62 GQE 64
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 276 EMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRP 455
+ R+L+ G +A T +++LK +P G V TV + V GG+DK+
Sbjct: 413 DSRLLVSG--SADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVS-GGKDKVLK 469
Query: 456 LWR 464
LWR
Sbjct: 470 LWR 472
>AC024202-4|AAF36036.1| 406|Caenorhabditis elegans Hypothetical
protein Y71H2B.7 protein.
Length = 406
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 279 MRILMLGLDAAGKTTILYKLK 341
+ MLG++ AGKTTI+ +LK
Sbjct: 33 IHFFMLGIEGAGKTTIVRQLK 53
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Frame = +3
Query: 282 RILMLGLDAAGKTTILYKLKLGQSVTTI-PTVGFNVET----VTYKN----VKFNVWDVG 434
++++LG GKT+I+Y+ + G + T+G + + Y++ V+ +WD
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTA 113
Query: 435 GQ 440
GQ
Sbjct: 114 GQ 115
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G + + F + DVGGQ R W H + ++
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIM 223
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G + + F + DVGGQ R W H + ++
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIM 223
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G + + F + DVGGQ R W H + ++
Sbjct: 128 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIM 171
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +3
Query: 363 IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYXGTQGLI 494
+PT G + + F + DVGGQ R W H + ++
Sbjct: 180 VPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIM 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,528,563
Number of Sequences: 27780
Number of extensions: 238982
Number of successful extensions: 817
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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