Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27o24
         (495 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   1.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   5.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   5.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   7.2  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           21   7.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   7.2  

>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 436 PPTSQTLNLTFLYVTVSTLKPTVGIVVT 353
           PPTS T+ L   Y+  + +  T+ +VVT
Sbjct: 290 PPTSLTVPLLGKYLLFTMVLVTLSVVVT 317


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 72  WMLDIVICDCHVAMCACC 125
           W L   +CD ++AM   C
Sbjct: 252 WSLPGFVCDFYIAMDVTC 269


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 426 DVGGQDKIRPLWRH 467
           DV   DK+ PL+ H
Sbjct: 267 DVSSNDKVHPLYGH 280


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 145 VIESSQLTNRVEWFR*AGDV 204
           V+ES +LTN VE F   G +
Sbjct: 38  VVESRELTNLVEIFDGRGTI 57



 Score = 21.4 bits (43), Expect = 5.4
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 42  CCVFCFDCFEWML 80
           CC  CF+C ++ +
Sbjct: 605 CCWHCFNCTQYQI 617


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -2

Query: 251 KLPHVDELASTTQ*YKTSPAHRNHSTLLVSCDDSITLVVAYLTACTHSHMTI 96
           KLPH D+   + Q   +S +    S + V  D     VVA   A T ++ T+
Sbjct: 434 KLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVA--AALTGTYPTL 483


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -2

Query: 299 SQHQYSHLLVTEYLREKLPHVDELAS 222
           +Q QY   +V +YL+++    D+ A+
Sbjct: 244 TQQQYQQQIVGKYLQQQAGQQDQQAN 269


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 264 FGNKEMRILMLGLDAAG 314
           FG    RI ++GL A G
Sbjct: 196 FGGNPKRITLIGLSAGG 212


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 264 FGNKEMRILMLGLDAAG 314
           FG    RI ++GL A G
Sbjct: 67  FGGNPKRITLIGLSAGG 83


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 264 FGNKEMRILMLGLDAAG 314
           FG    RI ++GL A G
Sbjct: 196 FGGNPKRITLIGLSAGG 212


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,240
Number of Sequences: 438
Number of extensions: 3392
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)