Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27o22
(564 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11 pr... 30 4.9
BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein. 30 4.9
AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein. 30 4.9
AL110271-1|CAB53709.1| 314|Homo sapiens hypothetical protein pr... 30 4.9
AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens ... 30 4.9
U36190-1|AAB03194.1| 208|Homo sapiens cysteine-rich protein 2 p... 29 8.5
D42123-1|BAA07703.1| 208|Homo sapiens ESP1/CRP2 protein. 29 8.5
BT019911-1|AAV38714.1| 208|Homo sapiens cysteine-rich protein 2... 29 8.5
BC128101-1|AAI28102.1| 208|Homo sapiens cysteine-rich protein 2... 29 8.5
BC034151-1|AAH34151.1| 208|Homo sapiens cysteine-rich protein 2... 29 8.5
BC001931-1|AAH01931.1| 208|Homo sapiens cysteine-rich protein 2... 29 8.5
BC000434-1|AAH00434.1| 208|Homo sapiens cysteine-rich protein 2... 29 8.5
AK223251-1|BAD96971.1| 208|Homo sapiens cysteine-rich protein 2... 29 8.5
>BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11
protein.
Length = 719
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 254 RCTYICIFYPRVCLQRLYNFHILNCWRCP 168
RC FYPR CL +L H+L+ CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471
>BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein.
Length = 408
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 254 RCTYICIFYPRVCLQRLYNFHILNCWRCP 168
RC FYPR CL +L H+L+ CP
Sbjct: 132 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 160
>AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein.
Length = 719
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 254 RCTYICIFYPRVCLQRLYNFHILNCWRCP 168
RC FYPR CL +L H+L+ CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471
>AL110271-1|CAB53709.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 254 RCTYICIFYPRVCLQRLYNFHILNCWRCP 168
RC FYPR CL +L H+L+ CP
Sbjct: 38 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 66
>AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ13640 fis, clone PLACE1011221. ).
Length = 719
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 254 RCTYICIFYPRVCLQRLYNFHILNCWRCP 168
RC FYPR CL +L H+L+ CP
Sbjct: 443 RCKAEPSFYPRNCLMQLIQTHVLSYSLCP 471
>U36190-1|AAB03194.1| 208|Homo sapiens cysteine-rich protein 2
protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
>D42123-1|BAA07703.1| 208|Homo sapiens ESP1/CRP2 protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
>BT019911-1|AAV38714.1| 208|Homo sapiens cysteine-rich protein 2
protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
>BC128101-1|AAI28102.1| 208|Homo sapiens cysteine-rich protein 2
protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
>BC034151-1|AAH34151.1| 208|Homo sapiens cysteine-rich protein 2
protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
>BC001931-1|AAH01931.1| 208|Homo sapiens cysteine-rich protein 2
protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
>BC000434-1|AAH00434.1| 208|Homo sapiens cysteine-rich protein 2
protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
>AK223251-1|BAD96971.1| 208|Homo sapiens cysteine-rich protein 2
variant protein.
Length = 208
Score = 29.5 bits (63), Expect = 8.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 327 GCKYSGSPCFATLFGAEGGSLAPDSLYVY 241
G + PC+ATLFG +G ++ Y+Y
Sbjct: 49 GKPFCHKPCYATLFGPKGVNIGGAGSYIY 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,215,468
Number of Sequences: 237096
Number of extensions: 1584416
Number of successful extensions: 4368
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4368
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -