Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27o22
         (564 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA...    31   1.1  
AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-P...    31   1.1  
AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-P...    31   1.1  
BT001721-1|AAN71476.1| 1120|Drosophila melanogaster RE69223p pro...    29   3.3  
AE014296-348|AAS64933.1| 1120|Drosophila melanogaster CG13921-PB...    29   3.3  
AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA...    29   3.3  
AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA...    28   7.6  

>AE014297-4234|AAF56792.1|  421|Drosophila melanogaster CG1894-PA
           protein.
          Length = 421

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = -2

Query: 281 PRAVVSPPTRCTYICIFYPR-VCLQRLYNFHILNC-WRCP 168
           P  V++      Y+C F  + +CL++ Y++H+ +C  RCP
Sbjct: 163 PYPVINDKATTIYVCEFCLKYMCLRKSYSYHLYDCKKRCP 202


>AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-PA,
           isoform A protein.
          Length = 1494

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
 Frame = +2

Query: 221 HVDKKYKYTYSESGARLPPSAPN-----SVAKQGDPLYLQPHTVLITKSGVIQLIMKSKL 385
           H   + +  YS+ GA  PP  PN      +A+     YL PH   I +  V+  I  + +
Sbjct: 638 HPPSELEKIYSKPGAPAPPLIPNDNLNSDMAQLTQGTYLTPHAQRIQEFLVVLAICNTVI 697

Query: 386 PYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFT 526
             A   ++ +    I +V   G     +K  +++ K L +    T T
Sbjct: 698 VGAAPHRDMMNASGIIEVQQIGNSPANLKHGKQRQKLLASSTSTTTT 744


>AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-PB,
           isoform B protein.
          Length = 1517

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
 Frame = +2

Query: 221 HVDKKYKYTYSESGARLPPSAPN-----SVAKQGDPLYLQPHTVLITKSGVIQLIMKSKL 385
           H   + +  YS+ GA  PP  PN      +A+     YL PH   I +  V+  I  + +
Sbjct: 638 HPPSELEKIYSKPGAPAPPLIPNDNLNSDMAQLTQGTYLTPHAQRIQEFLVVLAICNTVI 697

Query: 386 PYAIELQEWLLEEVIPQVLCTGKYDPAIKQQEEKNKQLVTKLIATFT 526
             A   ++ +    I +V   G     +K  +++ K L +    T T
Sbjct: 698 VGAAPHRDMMNASGIIEVQQIGNSPANLKHGKQRQKLLASSTSTTTT 744


>BT001721-1|AAN71476.1| 1120|Drosophila melanogaster RE69223p
           protein.
          Length = 1120

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 248 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 373
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 658 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 699


>AE014296-348|AAS64933.1| 1120|Drosophila melanogaster CG13921-PB,
           isoform B protein.
          Length = 1120

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 248 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 373
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 658 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 699


>AE014296-347|AAF47561.2| 1314|Drosophila melanogaster CG13921-PA,
           isoform A protein.
          Length = 1314

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 248 YSESGARLPPSAPNSVAKQGDPLYLQPHTVLITKSGVIQLIM 373
           Y   G   P S PNS A++G   YLQP   L+   G + + +
Sbjct: 852 YGVWGPPPPYSDPNSPARRGYYQYLQPTACLVGNQGTVAVTL 893


>AE014298-3105|AAF50838.2| 1570|Drosophila melanogaster CG1494-PA
            protein.
          Length = 1570

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 17/73 (23%), Positives = 32/73 (43%)
 Frame = -1

Query: 333  VCGCKYSGSPCFATLFGAEGGSLAPDSLYVYLYFLSTCLLTASLQFPYFKLLAMSLATNL 154
            +CG    G  CF+  +     S+  +  ++ +Y ++T +    + +  FKL+ M    N 
Sbjct: 1196 LCGINSIGLVCFSQFYRTHPESMLLEPTFMAMYTVATVICKLFMIYE-FKLICMDPVVNF 1254

Query: 153  TCGFPCSSTYLSV 115
            T      S  LS+
Sbjct: 1255 TSVEVFKSECLSI 1267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,251,930
Number of Sequences: 53049
Number of extensions: 518218
Number of successful extensions: 1572
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)