Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27o14
         (551 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058714-1|AAL13943.1|  493|Drosophila melanogaster LD45235p pro...   188   4e-48
AE014297-2922|AAF55842.1|  493|Drosophila melanogaster CG3593-PA...   188   4e-48
L00968-1|AAA29012.1|  493|Drosophila melanogaster UMP synthase; ...   171   7e-43
X54230-1|CAA38138.1|   78|Drosophila melanogaster UMP synthase p...    45   6e-05
BT015283-1|AAT94512.1|  341|Drosophila melanogaster GH23746p pro...    29   4.2  
BT011473-1|AAR99131.1|  319|Drosophila melanogaster RE15288p pro...    29   4.2  
AY051915-1|AAK93339.1|  270|Drosophila melanogaster LD40324p pro...    29   4.2  
AE014296-2544|AAN11776.1|  317|Drosophila melanogaster CG7656-PA...    29   4.2  
AE014296-2543|AAN11777.2|  269|Drosophila melanogaster CG7656-PB...    29   4.2  
AE014296-2542|AAF49611.1|  341|Drosophila melanogaster CG7656-PC...    29   4.2  
BT025843-1|ABF85743.1|  436|Drosophila melanogaster IP12365p pro...    28   7.3  
AE014297-649|AAF54147.1|  488|Drosophila melanogaster CG3014-PA ...    28   7.3  
BT003509-1|AAO39513.1|  629|Drosophila melanogaster RE33779p pro...    28   9.7  
AE014296-1600|AAF50309.2|  629|Drosophila melanogaster CG4476-PB...    28   9.7  

>AY058714-1|AAL13943.1|  493|Drosophila melanogaster LD45235p
           protein.
          Length = 493

 Score =  188 bits (458), Expect = 4e-48
 Identities = 88/162 (54%), Positives = 121/162 (74%), Gaps = 2/162 (1%)
 Frame = +2

Query: 2   RVIVSYPDIMELTSNMLYDLAVKDSQFD--HLCGVPYTALPIATLLSIQAKKPMLMRRKE 175
           RVIVSYPD+M+  S++L +  +KD Q    H+CGVPYTALP+AT++S+Q   PML+RRKE
Sbjct: 42  RVIVSYPDVMQTVSDLLVE-HIKDKQLSAKHVCGVPYTALPLATIVSVQQGTPMLVRRKE 100

Query: 176 TKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGG 355
            K+YGTKK +EG F   DTCLI+EDV+TSGSSIL+TV+DL+ EG+V T+A +++DREQGG
Sbjct: 101 AKAYGTKKLVEGIFNAGDTCLIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGG 160

Query: 356 RENLAKNGIHVKSLFTMRTLIEILKKHKKITDEIVVTVKNYL 481
             N+AK+G+ + SLFT+  L+  L +  +I    V  V  Y+
Sbjct: 161 VANIAKHGVRMHSLFTLSFLLNTLHEAGRIEKSTVEAVAKYI 202


>AE014297-2922|AAF55842.1|  493|Drosophila melanogaster CG3593-PA
           protein.
          Length = 493

 Score =  188 bits (458), Expect = 4e-48
 Identities = 88/162 (54%), Positives = 121/162 (74%), Gaps = 2/162 (1%)
 Frame = +2

Query: 2   RVIVSYPDIMELTSNMLYDLAVKDSQFD--HLCGVPYTALPIATLLSIQAKKPMLMRRKE 175
           RVIVSYPD+M+  S++L +  +KD Q    H+CGVPYTALP+AT++S+Q   PML+RRKE
Sbjct: 42  RVIVSYPDVMQTVSDLLVE-HIKDKQLSAKHVCGVPYTALPLATIVSVQQGTPMLVRRKE 100

Query: 176 TKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGG 355
            K+YGTKK +EG F   DTCLI+EDV+TSGSSIL+TV+DL+ EG+V T+A +++DREQGG
Sbjct: 101 AKAYGTKKLVEGIFNAGDTCLIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGG 160

Query: 356 RENLAKNGIHVKSLFTMRTLIEILKKHKKITDEIVVTVKNYL 481
             N+AK+G+ + SLFT+  L+  L +  +I    V  V  Y+
Sbjct: 161 VANIAKHGVRMHSLFTLSFLLNTLHEAGRIEKSTVEAVAKYI 202


>L00968-1|AAA29012.1|  493|Drosophila melanogaster UMP synthase; r-l
           gene product protein.
          Length = 493

 Score =  171 bits (415), Expect = 7e-43
 Identities = 84/162 (51%), Positives = 115/162 (70%), Gaps = 2/162 (1%)
 Frame = +2

Query: 2   RVIVSYPDIMELTSNMLYDLAVKDSQFD--HLCGVPYTALPIATLLSIQAKKPMLMRRKE 175
           RVIVS     +  S++L +  +KD Q    H+CGVPYTALP AT++S+Q   PML+RRKE
Sbjct: 42  RVIVSLGLPQQTVSDLLVE-HIKDKQLSAKHVCGVPYTALPRATIVSVQQGTPMLVRRKE 100

Query: 176 TKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGG 355
            K+YGTKK +EG F   DTCLI+EDV+TSGSSIL+TV+DL+ EG+V T+A +++DREQGG
Sbjct: 101 AKAYGTKKLVEGIFNAGDTCLIVEDVVTSGSSILDTVRDLQGEGIVVTDAVVVVDREQGG 160

Query: 356 RENLAKNGIHVKSLFTMRTLIEILKKHKKITDEIVVTVKNYL 481
             N+AK+G+ + SLFT+  L+  L +  +I    V  V  Y+
Sbjct: 161 VANIAKHGVRMHSLFTLSFLLNTLHEAGRIEKSTVEAVAKYI 202


>X54230-1|CAA38138.1|   78|Drosophila melanogaster UMP synthase
           protein.
          Length = 78

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
 Frame = +2

Query: 2   RVIVSYPDIMELTSNMLYDLAVKDSQFD--HLCGVPYT 109
           RVIVSYPD+M+  S++L +  +KD Q    H+CGVPYT
Sbjct: 42  RVIVSYPDVMQTVSDLLVE-HIKDKQLSAKHVCGVPYT 78


>BT015283-1|AAT94512.1|  341|Drosophila melanogaster GH23746p
           protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +2

Query: 170 KETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQ 349
           K T+   T+  ++ +F  DD  L  ED + S     E   D ++E      A   + +  
Sbjct: 247 KPTRKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDSATAPISKNN 306

Query: 350 GGRENLAKNGI 382
           GG      NG+
Sbjct: 307 GGSSKCKNNGL 317


>BT011473-1|AAR99131.1|  319|Drosophila melanogaster RE15288p
           protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +2

Query: 170 KETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQ 349
           K T+   T+  ++ +F  DD  L  ED + S     E   D ++E      A   + +  
Sbjct: 225 KPTRKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDSATAPISKNN 284

Query: 350 GGRENLAKNGI 382
           GG      NG+
Sbjct: 285 GGSSKCKNNGL 295


>AY051915-1|AAK93339.1|  270|Drosophila melanogaster LD40324p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +2

Query: 170 KETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQ 349
           K T+   T+  ++ +F  DD  L  ED + S     E   D ++E      A   + +  
Sbjct: 176 KPTRKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDSATAPISKNN 235

Query: 350 GGRENLAKNGI 382
           GG      NG+
Sbjct: 236 GGSSKCKNNGL 246


>AE014296-2544|AAN11776.1|  317|Drosophila melanogaster CG7656-PA,
           isoform A protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +2

Query: 170 KETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQ 349
           K T+   T+  ++ +F  DD  L  ED + S     E   D ++E      A   + +  
Sbjct: 223 KPTRKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDSATAPISKNN 282

Query: 350 GGRENLAKNGI 382
           GG      NG+
Sbjct: 283 GGSSKCKNNGL 293


>AE014296-2543|AAN11777.2|  269|Drosophila melanogaster CG7656-PB,
           isoform B protein.
          Length = 269

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +2

Query: 170 KETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQ 349
           K T+   T+  ++ +F  DD  L  ED + S     E   D ++E      A   + +  
Sbjct: 175 KPTRKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDSATAPISKNN 234

Query: 350 GGRENLAKNGI 382
           GG      NG+
Sbjct: 235 GGSSKCKNNGL 245


>AE014296-2542|AAF49611.1|  341|Drosophila melanogaster CG7656-PC,
           isoform C protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +2

Query: 170 KETKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQ 349
           K T+   T+  ++ +F  DD  L  ED + S     E   D ++E      A   + +  
Sbjct: 247 KPTRKPTTESGLDANFYDDDFDLETEDDLPSDDDFDEDDDDDEDEDEDEDSATAPISKNN 306

Query: 350 GGRENLAKNGI 382
           GG      NG+
Sbjct: 307 GGSSKCKNNGL 317


>BT025843-1|ABF85743.1|  436|Drosophila melanogaster IP12365p
           protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 29  MELTSNMLYDLAVKDSQFDHLCGVPYTALPIATLLSIQA 145
           ++L  N  + L VKD    +LC  P  + PI + L++ A
Sbjct: 85  LDLNYNAEFSLPVKDENLKYLCHWPCISGPICSTLTLPA 123


>AE014297-649|AAF54147.1|  488|Drosophila melanogaster CG3014-PA
           protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 29  MELTSNMLYDLAVKDSQFDHLCGVPYTALPIATLLSIQA 145
           ++L  N  + L VKD    +LC  P  + PI + L++ A
Sbjct: 137 LDLNYNAEFSLPVKDENLKYLCHWPCISGPICSTLTLPA 175


>BT003509-1|AAO39513.1|  629|Drosophila melanogaster RE33779p
           protein.
          Length = 629

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 538 IW*YNTFHKFFYNRSLCFIQVIFYCNYN 455
           +W YN   + F++ ++CF  +I Y +YN
Sbjct: 296 VW-YNAVTQVFFSLAVCFGVIIMYSSYN 322


>AE014296-1600|AAF50309.2|  629|Drosophila melanogaster CG4476-PB
           protein.
          Length = 629

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 538 IW*YNTFHKFFYNRSLCFIQVIFYCNYN 455
           +W YN   + F++ ++CF  +I Y +YN
Sbjct: 296 VW-YNAVTQVFFSLAVCFGVIIMYSSYN 322


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,746,572
Number of Sequences: 53049
Number of extensions: 479265
Number of successful extensions: 1182
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)