Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27o14
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-11|AAC17032.1| 227|Caenorhabditis elegans Hypothetical... 132 1e-31
Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical pr... 124 6e-29
Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical p... 124 6e-29
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 30 0.96
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 30 0.96
Z92796-2|CAB07231.1| 347|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 29 1.7
Z81117-9|CAB03317.2| 333|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 29 2.9
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical pr... 28 5.1
X59156-6|CAA41878.1| 160|Caenorhabditis elegans transposase pro... 27 6.8
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 27 6.8
Z81562-2|CAB04559.1| 331|Caenorhabditis elegans Hypothetical pr... 27 9.0
>AF067219-11|AAC17032.1| 227|Caenorhabditis elegans Hypothetical
protein R12E2.11 protein.
Length = 227
Score = 132 bits (320), Expect = 1e-31
Identities = 64/152 (42%), Positives = 102/152 (67%), Gaps = 1/152 (0%)
Frame = +2
Query: 2 RVIVSYPDIMELTSNMLYDLAVKDS-QFDHLCGVPYTALPIATLLSIQAKKPMLMRRKET 178
R I+S P ++ + + + + V + +FD++ GVPY ALP+ATL+S PMLM+RKE
Sbjct: 63 RRIMSSPRVLRMAAQAMCEKIVASNLKFDYVVGVPYAALPLATLVSDILNVPMLMKRKEA 122
Query: 179 KSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGGR 358
K+YGTK+ IEG ++ T L++EDV+TSG SI ET + ++NE L+ T+A +LDR+QG
Sbjct: 123 KAYGTKQLIEGVYQPGGTVLLVEDVVTSGESIRETAEAIRNENLLVTDAIAVLDRQQGAT 182
Query: 359 ENLAKNGIHVKSLFTMRTLIEILKKHKKITDE 454
NLA++ ++ S TM +++ L ++T+E
Sbjct: 183 ANLAEDNLNFLSFLTMEKILDGLITKNEMTEE 214
>Z35641-4|CAA84708.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 124 bits (298), Expect = 6e-29
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 7/186 (3%)
Frame = +2
Query: 2 RVIVSYPDIMELTSNMLY-DLAVKDSQFDHLCGVPYTALPIATLLSIQ-AKKPMLMRRKE 175
R +P ++ L S + + + + Q+ + G+PY ALP A++ + KKP+L+ RKE
Sbjct: 47 RECFGHPGLLMLISEAISKQVEISEVQYAGVLGIPYAALPYASVAAGNYLKKPLLIVRKE 106
Query: 176 TKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGG 355
KSYGTKK IEG ++ +D ++IEDV+T+G SIL+ VK L E LV ++ ILDREQGG
Sbjct: 107 AKSYGTKKLIEGLYQPNDRLILIEDVVTTGGSILDVVKVLHTENLVASDVFCILDREQGG 166
Query: 356 RENLAKNGIHVKSLFTMRTLIEILKKHKKITDEI---VVTVKN--YLNETKAPVIEKLME 520
R+ L G+ + SL M+T++ L I DE +V N Y + TK + +L
Sbjct: 167 RQKLQDAGVTLHSLLDMQTVLTFLYSTGAIGDEQWHGIVQALNLPYTSPTKLEINSELEN 226
Query: 521 RVILPY 538
LPY
Sbjct: 227 LSSLPY 232
>Z29443-13|CAA82579.1| 497|Caenorhabditis elegans Hypothetical
protein T07C4.1 protein.
Length = 497
Score = 124 bits (298), Expect = 6e-29
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 7/186 (3%)
Frame = +2
Query: 2 RVIVSYPDIMELTSNMLY-DLAVKDSQFDHLCGVPYTALPIATLLSIQ-AKKPMLMRRKE 175
R +P ++ L S + + + + Q+ + G+PY ALP A++ + KKP+L+ RKE
Sbjct: 47 RECFGHPGLLMLISEAISKQVEISEVQYAGVLGIPYAALPYASVAAGNYLKKPLLIVRKE 106
Query: 176 TKSYGTKKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGG 355
KSYGTKK IEG ++ +D ++IEDV+T+G SIL+ VK L E LV ++ ILDREQGG
Sbjct: 107 AKSYGTKKLIEGLYQPNDRLILIEDVVTTGGSILDVVKVLHTENLVASDVFCILDREQGG 166
Query: 356 RENLAKNGIHVKSLFTMRTLIEILKKHKKITDEI---VVTVKN--YLNETKAPVIEKLME 520
R+ L G+ + SL M+T++ L I DE +V N Y + TK + +L
Sbjct: 167 RQKLQDAGVTLHSLLDMQTVLTFLYSTGAIGDEQWHGIVQALNLPYTSPTKLEINSELEN 226
Query: 521 RVILPY 538
LPY
Sbjct: 227 LSSLPY 232
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 30.3 bits (65), Expect = 0.96
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Frame = +2
Query: 212 HFKKDDTCLIIEDVITSGSS--ILETVKDLKNEGLVTTE-----AAIILDREQGGRENLA 370
HF D ++I DV+ +G + +L+ + + V+ E +A+ + + + + +
Sbjct: 68 HFTSGDPVVVISDVVPNGPAWGLLQVNDRILSANQVSFENIEYSSAVDIIKNKDHIDMIV 127
Query: 371 KNGIHVKSL-FTMRTLIEILKKHKKITD-EIVVTVKNYLNETKAP 499
K + V L + RTL L K +K D IVV K Y+ E + P
Sbjct: 128 KRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNP 172
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 30.3 bits (65), Expect = 0.96
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Frame = +2
Query: 212 HFKKDDTCLIIEDVITSGSS--ILETVKDLKNEGLVTTE-----AAIILDREQGGRENLA 370
HF D ++I DV+ +G + +L+ + + V+ E +A+ + + + + +
Sbjct: 68 HFTSGDPVVVISDVVPNGPAWGLLQVNDRILSANQVSFENIEYSSAVDIIKNKDHIDMIV 127
Query: 371 KNGIHVKSL-FTMRTLIEILKKHKKITD-EIVVTVKNYLNETKAP 499
K + V L + RTL L K +K D IVV K Y+ E + P
Sbjct: 128 KRRVAVPMLEYEQRTLKFTLSKSRKKDDFGIVVGCKFYIKEIRNP 172
>Z92796-2|CAB07231.1| 347|Caenorhabditis elegans Hypothetical
protein H25K10.3 protein.
Length = 347
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 88 FVWSSIYCLAHCYTTKYTSEKTYVDEKERNKILWNQKK 201
F W+S+ C A C + T+ + + R+ LWN K+
Sbjct: 112 FAWTSVICQAMCVSVLATNRLSAILFPHRHFQLWNSKR 149
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 29.5 bits (63), Expect = 1.7
Identities = 26/100 (26%), Positives = 50/100 (50%)
Frame = +2
Query: 215 FKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGGRENLAKNGIHVKS 394
F+KD+ ++ VIT+ ++ + +++LKNE LV +EA + + + + L ++ +S
Sbjct: 487 FRKDEN---LKKVITAEINVNKCLQNLKNESLVISEALKTIQKLRLLDDKLLES--VQQS 541
Query: 395 LFTMRTLIEILKKHKKITDEIVVTVKNYLNETKAPVIEKL 514
++ + L K I D + VKN E +E L
Sbjct: 542 ATSVAQFSDALPTVKSIPDAMKKGVKNVTLELNQMSLESL 581
>Z81117-9|CAB03317.2| 333|Caenorhabditis elegans Hypothetical
protein T06E6.8 protein.
Length = 333
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = -3
Query: 204 MLFLVP*DFVSFLLINIGFFACILSSVAMGKAVYGTPH--K*SNWLSFTAKSYNI-FEVS 34
M+F+ DF + L ++G AC L + + ++ TP K W+ F A ++I F++S
Sbjct: 1 MIFMESPDFFFYTLHSMGAVACPLQILGLYCILFKTPQSMKSVKWVLFNAHIWSILFDIS 60
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical
protein T19D12.4b protein.
Length = 1015
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = +2
Query: 251 VITSGSSILETVKDLKNEGLVTTEAAIILDREQGGRENLAKNGIHVKSLFTMRTLIEILK 430
+IT S ++E K L AAI GG N+ K + K+LF + K
Sbjct: 417 IITFSSDVVEVRKLTDGNTLDAVNAAIDTVHYTGGLTNVTKAQLTAKNLFDTESNANRNK 476
Query: 431 KHKKITDEIVVTVKNYLNETKA 496
+TD V TV Y +E A
Sbjct: 477 VLFILTDG-VPTVDTYTDEVAA 497
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical
protein T19D12.4a protein.
Length = 1028
Score = 28.7 bits (61), Expect = 2.9
Identities = 25/82 (30%), Positives = 34/82 (41%)
Frame = +2
Query: 251 VITSGSSILETVKDLKNEGLVTTEAAIILDREQGGRENLAKNGIHVKSLFTMRTLIEILK 430
+IT S ++E K L AAI GG N+ K + K+LF + K
Sbjct: 430 IITFSSDVVEVRKLTDGNTLDAVNAAIDTVHYTGGLTNVTKAQLTAKNLFDTESNANRNK 489
Query: 431 KHKKITDEIVVTVKNYLNETKA 496
+TD V TV Y +E A
Sbjct: 490 VLFILTDG-VPTVDTYTDEVAA 510
>Z70780-8|CAA94825.2| 266|Caenorhabditis elegans Hypothetical
protein F46B6.9 protein.
Length = 266
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 91 VWSSIYCLAHCYTTKYTSEKTYVDEKER 174
+W+ + CLAH T K ++ Y E+ER
Sbjct: 153 IWTIVQCLAHSDTKKLRADFMYWIEEER 180
>X59156-6|CAA41878.1| 160|Caenorhabditis elegans transposase
protein.
Length = 160
Score = 27.5 bits (58), Expect = 6.8
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 484 IQVIFYCNYNFICYFLVFFKYFNQC 410
I V +C ++ +C+ L+FF + C
Sbjct: 129 ISVDNFCFFSVVCFSLIFFSFMKNC 153
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +2
Query: 194 KKSIEGHFKKDDTCLIIEDVITSGSSILETVKDLKNEGLVTTEAAIILDREQGGREN 364
K + EG+F+ DD+ + E+ G E + K++ + + EA D Q RE+
Sbjct: 567 KNASEGNFQSDDSQIYSEERRQVGQEYQEEASEDKDDSMDSAEAGERSDDPQDLRES 623
>Z81562-2|CAB04559.1| 331|Caenorhabditis elegans Hypothetical
protein K03D7.4 protein.
Length = 331
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -3
Query: 183 DFVSFLLINIGFFACILSSVAMGKAVYGTPHK*SN--WLSFTAKSYN-IFEVS 34
DF+ + L +G C L + + +Y TPH S+ W+ F A ++ IF+++
Sbjct: 5 DFLFYTLHAMGAVTCPLQILGIYCILYKTPHAMSSAKWVLFNAHIWSLIFDIT 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,724,592
Number of Sequences: 27780
Number of extensions: 268760
Number of successful extensions: 847
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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