Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27o11
(305 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 120 1e-27
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 120 1e-27
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 120 1e-27
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 120 1e-27
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 120 1e-27
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 62 3e-10
AF190824-1|AAF19172.1| 447|Homo sapiens P2X2C receptor protein. 29 2.0
Z97184-7|CAB09994.2| 610|Homo sapiens chromosome 6 open reading... 29 2.7
BX000343-2|CAI41830.1| 610|Homo sapiens WD repeat domain 46 pro... 29 2.7
BX000343-1|CAI41829.2| 322|Homo sapiens WD repeat domain 46 pro... 29 2.7
BC000388-1|AAH00388.1| 610|Homo sapiens WD repeat domain 46 pro... 29 2.7
AL844527-3|CAI41833.1| 610|Homo sapiens WD repeat domain 46 pro... 29 2.7
AL844527-2|CAM25782.1| 322|Homo sapiens WD repeat domain 46 pro... 29 2.7
AL662827-3|CAI17516.1| 610|Homo sapiens WD repeat domain 46 pro... 29 2.7
AL662827-2|CAM24884.1| 322|Homo sapiens WD repeat domain 46 pro... 29 2.7
AL662820-3|CAI18113.1| 610|Homo sapiens WD repeat domain 46 pro... 29 2.7
AL662820-2|CAM25468.1| 322|Homo sapiens WD repeat domain 46 pro... 29 2.7
AL031228-6|CAA20229.1| 610|Homo sapiens chromosome 6 open readi... 29 2.7
AB209718-1|BAD92955.1| 518|Homo sapiens Dematin variant protein. 29 2.7
U91927-1|AAB68667.1| 420|Homo sapiens monocyte inhibitory recep... 29 3.5
U91926-1|AAB68666.1| 439|Homo sapiens monocyte inhibitory recep... 29 3.5
BC028208-1|AAH28208.1| 439|Homo sapiens leukocyte immunoglobuli... 29 3.5
AF482769-1|AAM18042.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF482768-1|AAM18041.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF482767-1|AAM18040.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF482766-1|AAM18039.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF482765-1|AAM18038.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF482764-1|AAM18037.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF482763-1|AAM18036.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF482762-1|AAM18035.1| 420|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF025527-1|AAB87661.1| 439|Homo sapiens leucocyte immunoglobuli... 29 3.5
AF014923-1|AAC51885.1| 439|Homo sapiens immunoglobulin-like tra... 29 3.5
BC064601-1|AAH64601.1| 583|Homo sapiens PLEKHA4 protein protein. 28 4.6
BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear prote... 28 4.6
BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein. 28 4.6
AK056632-1|BAB71237.1| 757|Homo sapiens protein ( Homo sapiens ... 28 4.6
M74096-1|AAA51565.1| 430|Homo sapiens long chain acyl-CoA dehyd... 28 6.1
BC064549-1|AAH64549.1| 430|Homo sapiens acyl-Coenzyme A dehydro... 28 6.1
BC039063-1|AAH39063.1| 430|Homo sapiens acyl-Coenzyme A dehydro... 28 6.1
AC006994-2|AAY14881.1| 430|Homo sapiens unknown protein. 28 6.1
AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa 1-... 27 8.1
AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa 1-... 27 8.1
AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa 1-... 27 8.1
AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa 1-... 27 8.1
AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa 1-... 27 8.1
AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa 1-... 27 8.1
AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1 p... 27 8.1
AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1 p... 27 8.1
AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1 p... 27 8.1
AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1 p... 27 8.1
AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa 1-... 27 8.1
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 60/95 (63%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSXKATGDETGAKVERADGYEPPVQESV 264
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 120 bits (288), Expect = 1e-27
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = +2
Query: 5 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 184
EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLM
Sbjct: 170 EIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLM 229
Query: 185 ELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 277
ELH D K ER +GYEPPVQESV
Sbjct: 230 ELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/57 (54%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Frame = +2
Query: 113 PLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQE 271
PL DV +RKVK+LK+P+FE+ KLMELH D K ER +GYEPPVQE
Sbjct: 1 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQE 57
>AF190824-1|AAF19172.1| 447|Homo sapiens P2X2C receptor protein.
Length = 447
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -2
Query: 184 HQLRDLE--TGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVR 65
H++ D+E P + + +A D +AG LD+LGNG+R
Sbjct: 90 HKVWDVEEYVKPPESIRVHNATCLSDADCVAGELDMLGNGLR 131
>Z97184-7|CAB09994.2| 610|Homo sapiens chromosome 6 open reading
frame 11 protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>BX000343-2|CAI41830.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>BX000343-1|CAI41829.2| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>BC000388-1|AAH00388.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL844527-3|CAI41833.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL844527-2|CAM25782.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL662827-3|CAI17516.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL662827-2|CAM24884.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL662820-3|CAI18113.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL662820-2|CAM25468.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL031228-6|CAA20229.1| 610|Homo sapiens chromosome 6 open reading
frame 11 protein.
Length = 610
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 166 ETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQLVH 50
ETG L + +S I ++A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AB209718-1|BAD92955.1| 518|Homo sapiens Dematin variant protein.
Length = 518
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 140 PFGCKHRAEGRCHGRPSRCPWQWSQESTCSPP 45
P GC + EGRC G + P + S C PP
Sbjct: 328 PVGCLEQLEGRCRG--GKRPGRKSSRLLCRPP 357
>U91927-1|AAB68667.1| 420|Homo sapiens monocyte inhibitory receptor
precursor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 153 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 193
>U91926-1|AAB68666.1| 439|Homo sapiens monocyte inhibitory receptor
precursor protein.
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>BC028208-1|AAH28208.1| 439|Homo sapiens leukocyte
immunoglobulin-like receptor, subfamily A (without TM
domain), member protein.
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482769-1|AAM18042.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482768-1|AAM18041.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482767-1|AAM18040.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482766-1|AAM18039.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482765-1|AAM18038.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482764-1|AAM18037.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482763-1|AAM18036.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF482762-1|AAM18035.1| 420|Homo sapiens leucocyte
immunoglobulin-like receptor protein.
Length = 420
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF025527-1|AAB87661.1| 439|Homo sapiens leucocyte
immunoglobulin-like receptor-4 protein.
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>AF014923-1|AAC51885.1| 439|Homo sapiens immunoglobulin-like
transcript 6 protein.
Length = 439
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 182 STSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 60
S +R + A ++ P R RC+G SR P+ WS S
Sbjct: 172 SHARGSSRAIFSVGPVSPSRRWSYRCYGYDSRAPYVWSLPS 212
>BC064601-1|AAH64601.1| 583|Homo sapiens PLEKHA4 protein protein.
Length = 583
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 101 GRPSRCPWQWSQESTCSPPP*VQS 30
G+P R P WSQE P P ++S
Sbjct: 308 GKPPRSPQHWSQEPRTQPGPPLES 331
>BC050463-1|AAH50463.1| 953|Homo sapiens conserved nuclear protein
NHN1 protein.
Length = 953
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 182 STSRSRNGASS-TLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP 42
S SRSR+ +SS + SP HR R G P+ P + ++S P P
Sbjct: 595 SRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAP 642
>BC001584-1|AAH01584.1| 718|Homo sapiens LOC124245 protein protein.
Length = 718
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 182 STSRSRNGASS-TLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP 42
S SRSR+ +SS + SP HR R G P+ P + ++S P P
Sbjct: 360 SRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAP 407
>AK056632-1|BAB71237.1| 757|Homo sapiens protein ( Homo sapiens
cDNA FLJ32070 fis, clone OCBBF1000119. ).
Length = 757
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 182 STSRSRNGASS-TLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSPPP 42
S SRSR+ +SS + SP HR R G P+ P + ++S P P
Sbjct: 563 SRSRSRSFSSSPSPSPTPSPHRPSIRTKGEPAPPPGKAGEKSVKKPAP 610
>M74096-1|AAA51565.1| 430|Homo sapiens long chain acyl-CoA
dehydrogenase protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 82 GHREGLPWHLPSARCLHPKGESVEEAP 162
GHR P LP+ARC H GE E P
Sbjct: 15 GHRA--PRQLPAARCSHSGGEERLETP 39
>BC064549-1|AAH64549.1| 430|Homo sapiens acyl-Coenzyme A
dehydrogenase, long chain protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 82 GHREGLPWHLPSARCLHPKGESVEEAP 162
GHR P LP+ARC H GE E P
Sbjct: 15 GHRA--PRQLPAARCSHSGGEERLETP 39
>BC039063-1|AAH39063.1| 430|Homo sapiens acyl-Coenzyme A
dehydrogenase, long chain protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 82 GHREGLPWHLPSARCLHPKGESVEEAP 162
GHR P LP+ARC H GE E P
Sbjct: 15 GHRA--PRQLPAARCSHSGGEERLETP 39
>AC006994-2|AAY14881.1| 430|Homo sapiens unknown protein.
Length = 430
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 82 GHREGLPWHLPSARCLHPKGESVEEAP 162
GHR P LP+ARC H GE E P
Sbjct: 15 GHRA--PRQLPAARCSHSGGEERLETP 39
>AY168346-1|AAN86964.1| 2480|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2480
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 176 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQEST 57
+RS GASS S H GRP CP + E++
Sbjct: 525 ARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETS 564
>AY168345-1|AAN86963.1| 2464|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2464
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 176 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQEST 57
+RS GASS S H GRP CP + E++
Sbjct: 525 ARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETS 564
>AY168344-1|AAN86962.1| 2448|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2448
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 176 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQEST 57
+RS GASS S H GRP CP + E++
Sbjct: 525 ARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETS 564
>AY168343-1|AAN86961.1| 2432|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2432
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 176 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQEST 57
+RS GASS S H GRP CP + E++
Sbjct: 525 ARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETS 564
>AY168342-1|AAN86960.1| 2416|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2416
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 176 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQEST 57
+RS GASS S H GRP CP + E++
Sbjct: 525 ARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETS 564
>AY168341-1|AAN86959.1| 2400|Homo sapiens retinitis pigmentosa
1-like 1 protein protein.
Length = 2400
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 176 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQEST 57
+RS GASS S H GRP CP + E++
Sbjct: 525 ARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETS 564
>AL139333-5|CAI15284.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 112 VDAMAGLLDVLGNGVRNQLVHHLPEFRV 29
V AM G+L V G G N L+ L FR+
Sbjct: 320 VQAMVGILQVNGFGEENTLMQDLKPFRI 347
>AL139333-4|CAM21599.1| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 112 VDAMAGLLDVLGNGVRNQLVHHLPEFRV 29
V AM G+L V G G N L+ L FR+
Sbjct: 329 VQAMVGILQVNGFGEENTLMQDLKPFRI 356
>AL121716-2|CAI42426.1| 2369|Homo sapiens dopey family member 1
protein.
Length = 2369
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 112 VDAMAGLLDVLGNGVRNQLVHHLPEFRV 29
V AM G+L V G G N L+ L FR+
Sbjct: 320 VQAMVGILQVNGFGEENTLMQDLKPFRI 347
>AL121716-1|CAI42425.2| 2465|Homo sapiens dopey family member 1
protein.
Length = 2465
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 112 VDAMAGLLDVLGNGVRNQLVHHLPEFRV 29
V AM G+L V G G N L+ L FR+
Sbjct: 329 VQAMVGILQVNGFGEENTLMQDLKPFRI 356
>AJ491324-1|CAD36957.1| 2464|Homo sapiens retinitis pigmentosa
1-like protein 1 protein.
Length = 2464
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 176 SRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQEST 57
+RS GASS S H GRP CP + E++
Sbjct: 525 ARSEEGASSDSSASTGSHEGSSEWGGRPQGCPGKARAETS 564
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,365,913
Number of Sequences: 237096
Number of extensions: 745790
Number of successful extensions: 2618
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 2405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2601
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1342408202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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