Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27o08
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   5.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   9.4  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     23   9.4  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = +3

Query: 207 LFKIGQTTNLTRRLVSLNCGRADDDQMRYVLQTEPTVHHTLLEKLMKQELRPYRNSGEV 383
           +FK   TT   R +   +C  ++   +  +L+  PT+     + L++   R     G+V
Sbjct: 735 VFKQDSTTTKCRVVFDGSCKTSNGRSLNDILKVGPTIQQDTTDILLRWRRRAIAVVGDV 793


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +1

Query: 16  SCAP-R*PTRRSCKIGFTNTCCPSAPPDS 99
           SC+P    +  SC      + CP++PP S
Sbjct: 237 SCSPLSTASSASCSSSAAGSLCPTSPPAS 265


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 192 TAASWPHRNGPRRERN*TLLSLGR 121
           TAA  P +NG    +N +L  +GR
Sbjct: 432 TAAYSPQQNGVAERKNRSLTEMGR 455


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,750
Number of Sequences: 2352
Number of extensions: 10161
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)