Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27o05
(591 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 27 0.14
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.24
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 26 0.32
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 26 0.32
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 26 0.32
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 2.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 2.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 2.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 3.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 3.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 9.0
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 27.1 bits (57), Expect = 0.14
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = -3
Query: 268 DHCRHYLFPEFRFTLFDCGHNHVPGTGRRQSVQATFDTLDSDHIQILCPCVVGAV 104
D C Y + +T DCG P +R Q + + + + P V+ +
Sbjct: 471 DQCEEYEYVHDEYTCMDCGPGKWPHEDKRGCYQLAINHIRWNSAFAIAPAVISCL 525
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 26.2 bits (55), Expect = 0.24
Identities = 12/55 (21%), Positives = 21/55 (38%)
Frame = -3
Query: 268 DHCRHYLFPEFRFTLFDCGHNHVPGTGRRQSVQATFDTLDSDHIQILCPCVVGAV 104
D C Y + +T DCG P +R Q + + + + P V+ +
Sbjct: 561 DQCEEYEYVYDEYTCMDCGPGKWPHEDKRGCYQLAINHIRWNSAFAIAPAVISCL 615
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.32
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 424 LKRELYSLNIRLRLVTAFHFPFLVHQSQTRKIIICVIDIYN 546
L+ +++L + + V +F F S R ICV +IY+
Sbjct: 3 LRCNIWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYS 43
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.32
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 424 LKRELYSLNIRLRLVTAFHFPFLVHQSQTRKIIICVIDIYN 546
L+ +++L + + V +F F S R ICV +IY+
Sbjct: 3 LRCNIWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYS 43
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.8 bits (54), Expect = 0.32
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 424 LKRELYSLNIRLRLVTAFHFPFLVHQSQTRKIIICVIDIYN 546
L+ +++L + + V +F F S R ICV +IY+
Sbjct: 3 LRCNIWTLAVNVLFVNSFLFVIAAQDSSGRIFTICVPEIYS 43
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 477 SLSFPSTSKSNPKNYNLRNRHLQCKCAKLEY 569
SLS + +N YN N + C KL Y
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 477 SLSFPSTSKSNPKNYNLRNRHLQCKCAKLEY 569
SLS + +N YN N + C KL Y
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.0 bits (47), Expect = 2.2
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 477 SLSFPSTSKSNPKNYNLRNRHLQCKCAKLEY 569
SLS + +N YN N + C KL Y
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 477 SLSFPSTSKSNPKNYNLRNRHLQCKCAKLEY 569
SLS + +N YN N + C KL Y
Sbjct: 84 SLSNRTIHNNNNYKYNYNNNNYNNNCKKLYY 114
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 3.9
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +3
Query: 192 VPGT*LWPQSKRVNLNSGKR--*CRQWSSGSGNRS 290
+P T LW ++ R+ +++ K+ + WS S N +
Sbjct: 439 IPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNA 473
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -1
Query: 246 FRSSGLPFLTVATIMSPEPAAGSLFRRPLIP 154
F S +PF++ I++ P + RP+IP
Sbjct: 1034 FHYSVVPFVSNHDILNLRPLSMEKGTRPMIP 1064
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,313
Number of Sequences: 438
Number of extensions: 3789
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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