Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27n19
(613 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11 pro... 310 3e-84
BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11 p... 310 3e-84
AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11 p... 310 3e-84
AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen ... 310 3e-84
AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11 p... 310 3e-84
AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting ... 308 1e-83
X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11 pro... 300 2e-81
AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11 p... 298 1e-80
AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11 p... 242 6e-64
AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11 p... 75 2e-13
U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subu... 32 1.4
U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor cGMP-p... 32 1.4
AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.4
AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C, c... 32 1.4
>L05092-1|AAC15856.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 310 bits (761), Expect = 3e-84
Identities = 143/167 (85%), Positives = 157/167 (94%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>BC018970-1|AAH18970.1| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 310 bits (761), Expect = 3e-84
Identities = 143/167 (85%), Positives = 157/167 (94%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 174
>AL451000-3|CAH71472.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 310 bits (761), Expect = 3e-84
Identities = 143/167 (85%), Positives = 157/167 (94%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>AF432212-1|AAL99919.1| 176|Homo sapiens CLL-associated antigen
KW-12 protein.
Length = 176
Score = 310 bits (761), Expect = 3e-84
Identities = 143/167 (85%), Positives = 157/167 (94%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 127 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 173
>AF101385-1|AAD20460.3| 177|Homo sapiens ribosomal protein L11
protein.
Length = 177
Score = 310 bits (761), Expect = 3e-84
Identities = 143/167 (85%), Positives = 157/167 (94%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 174
>AY871274-1|AAX11430.1| 177|Homo sapiens cell growth-inhibiting
protein 34 protein.
Length = 177
Score = 308 bits (756), Expect = 1e-83
Identities = 142/167 (85%), Positives = 156/167 (93%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRL RAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 8 ENPMRELRIRKLCLNICVGESGDRLARAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 67
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 68 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 127
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 128 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 174
>X79234-1|CAA55816.1| 178|Homo sapiens ribosomal protein L11
protein.
Length = 178
Score = 300 bits (737), Expect = 2e-81
Identities = 139/167 (83%), Positives = 154/167 (92%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESG RLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGGRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHC VRGAKA EILE+GLKVRE ELR++NFS TGNFGFGIQEHIDLGI+YDPSIGIYGL
Sbjct: 69 AVHCAVRGAKAEEILEKGLKVRELELRKNNFSDTGNFGFGIQEHIDLGIEYDPSIGIYGL 128
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQKYDGIIL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>AL451000-5|CAH71474.1| 174|Homo sapiens ribosomal protein L11
protein.
Length = 174
Score = 298 bits (731), Expect = 1e-80
Identities = 139/167 (83%), Positives = 153/167 (91%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 472 DFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDGIIL 612
DFYVVLGRPGF++A ++R+TG +G HR++KE+AM+WFQQK I L
Sbjct: 127 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKVKLIYL 173
>AL451000-4|CAH71473.1| 131|Homo sapiens ribosomal protein L11
protein.
Length = 131
Score = 242 bits (593), Expect = 6e-64
Identities = 115/125 (92%), Positives = 119/125 (95%)
Frame = +1
Query: 112 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 291
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 7 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 66
Query: 292 AVHCTVRGAKAXEILERGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 471
AVHCTVRGAKA EILE+GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 67 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 126
Query: 472 DFYVV 486
DFYVV
Sbjct: 127 DFYVV 131
>AB007171-1|BAA25831.1| 36|Homo sapiens ribosomal protein L11
protein.
Length = 36
Score = 74.9 bits (176), Expect = 2e-13
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +1
Query: 136 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSK 243
IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSK
Sbjct: 1 IRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSK 36
>U31973-1|AAA96392.1| 858|Homo sapiens phosphodiesterase A' subunit
protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 106 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 267
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>U20212-1|AAA92886.1| 858|Homo sapiens cone photoreceptor
cGMP-phosphodiesterase alpha' subunit protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 106 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 267
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL356214-7|CAH72330.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 106 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 267
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
>AL157396-4|CAH73839.1| 858|Homo sapiens phosphodiesterase 6C,
cGMP-specific, cone, alpha prime protein.
Length = 858
Score = 32.3 bits (70), Expect = 1.4
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1
Query: 106 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSF 267
N +++ LH NI S + A KV E+LT + F KA YTVRS+
Sbjct: 218 NFVSIILRLHHTSYMYNIESRRSQILMWSANKVFEELTDVERQFHKALYTVRSY 271
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,706,382
Number of Sequences: 237096
Number of extensions: 1943403
Number of successful extensions: 11333
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11333
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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