Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc27n18
         (682 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L37732-1|AAA75649.1|  291|Drosophila melanogaster syntaxin 1A pr...    33   0.48 
AY061472-1|AAL29020.1|  291|Drosophila melanogaster LD43943p pro...    33   0.48 
AE014297-3456|AAF56232.1|  291|Drosophila melanogaster CG31136-P...    33   0.48 
BT022472-1|AAY54888.1|  430|Drosophila melanogaster IP11764p pro...    29   5.9  
AE014296-3301|AAF49050.1|  430|Drosophila melanogaster CG13813-P...    29   5.9  

>L37732-1|AAA75649.1|  291|Drosophila melanogaster syntaxin 1A
           protein.
          Length = 291

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 16/83 (19%), Positives = 44/83 (53%)
 Frame = +1

Query: 349 VIKTQTFQKVKATLQRRHEKRQVWISATAELRDTYMDQDGNMQFQGYLLEEITSKTQQQI 528
           +++TQ  ++  A ++ RH+      ++  EL D +MD    ++ QG +++ I    +  +
Sbjct: 185 IMETQQAKQTLADIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAM 244

Query: 529 FTNETSTETLTRILENFAELKKE 597
              +T+T+   + L+  ++ +++
Sbjct: 245 DYVQTATQDTKKALKYQSKARRK 267


>AY061472-1|AAL29020.1|  291|Drosophila melanogaster LD43943p
           protein.
          Length = 291

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 16/83 (19%), Positives = 44/83 (53%)
 Frame = +1

Query: 349 VIKTQTFQKVKATLQRRHEKRQVWISATAELRDTYMDQDGNMQFQGYLLEEITSKTQQQI 528
           +++TQ  ++  A ++ RH+      ++  EL D +MD    ++ QG +++ I    +  +
Sbjct: 185 IMETQQAKQTLADIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAM 244

Query: 529 FTNETSTETLTRILENFAELKKE 597
              +T+T+   + L+  ++ +++
Sbjct: 245 DYVQTATQDTKKALKYQSKARRK 267


>AE014297-3456|AAF56232.1|  291|Drosophila melanogaster CG31136-PA
           protein.
          Length = 291

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 16/83 (19%), Positives = 44/83 (53%)
 Frame = +1

Query: 349 VIKTQTFQKVKATLQRRHEKRQVWISATAELRDTYMDQDGNMQFQGYLLEEITSKTQQQI 528
           +++TQ  ++  A ++ RH+      ++  EL D +MD    ++ QG +++ I    +  +
Sbjct: 185 IMETQQAKQTLADIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAM 244

Query: 529 FTNETSTETLTRILENFAELKKE 597
              +T+T+   + L+  ++ +++
Sbjct: 245 DYVQTATQDTKKALKYQSKARRK 267


>BT022472-1|AAY54888.1|  430|Drosophila melanogaster IP11764p
           protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 515 VFDVISSSKYPWN--CIFPSWSM*VSRNSAVAEIHTCLF 405
           +F+ +S S +  N  CI P++ + V    A+AE+H C F
Sbjct: 119 IFEDLSESGFRPNSRCIMPTYDIVVCSLKALAELHACSF 157


>AE014296-3301|AAF49050.1|  430|Drosophila melanogaster CG13813-PA
           protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -3

Query: 515 VFDVISSSKYPWN--CIFPSWSM*VSRNSAVAEIHTCLF 405
           +F+ +S S +  N  CI P++ + V    A+AE+H C F
Sbjct: 119 IFEDLSESGFRPNSRCIMPTYDIVVCSLKALAELHACSF 157


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,727,661
Number of Sequences: 53049
Number of extensions: 542986
Number of successful extensions: 1759
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1759
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)