Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27n03
(567 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 24 0.93
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 24 0.93
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 24 0.93
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 24 0.93
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 24 0.93
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 1.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 1.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 1.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 1.6
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 23 1.6
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 4.9
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 0.93
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 48
R +E+ K K++ + + HN N Y+ L
Sbjct: 68 RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 0.93
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 48
R +E+ K K++ + + HN N Y+ L
Sbjct: 68 RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 24.2 bits (50), Expect = 0.93
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 48
R +E+ K K++ + + HN N Y+ L
Sbjct: 68 RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 24.2 bits (50), Expect = 0.93
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 48
R +E+ K K++ + + HN N Y+ L
Sbjct: 68 RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 100
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 24.2 bits (50), Expect = 0.93
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNL 48
R +E+ K K++ + + HN N Y+ L
Sbjct: 301 RDRKERERSKEPKIISSLSNKTIHNNNNNYKKL 333
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KL 12
R +E+ + K++ + + HN N N + +NC KL
Sbjct: 68 RDRTERERSREPKIISSLSNRTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KL 12
R +E+ + K++ + + HN N N + +NC KL
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KL 12
R +E+ + K++ + + HN N N + +NC KL
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKL 112
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 23.4 bits (48), Expect = 1.6
Identities = 11/45 (24%), Positives = 20/45 (44%)
Frame = -2
Query: 146 RSSNTKEKHKT*KVVGIVVSLAFHNRRNKYQNLFHPKQVSNC*KL 12
R +E+ + K++ + + HN N N + +NC KL
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYKYNYNNNNYNNNCKKL 112
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 23.4 bits (48), Expect = 1.6
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 11 LVFNSLRL-VWGETNFGIYFYGCEMQAKRRYLLLFMSCAFLLY 136
L F S+ L V G F I F+GC + + + +FLL+
Sbjct: 48 LAFPSITLIVLGSIIFVISFFGCCGAIRESHCMTITFASFLLF 90
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.8 bits (44), Expect = 4.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 483 CSDDKGSASSVSIAGTNKHASFGSLV 406
C D+ G S S G AS GS+V
Sbjct: 15 CCDNLGGPGSSSAGGVVTGASGGSIV 40
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,402
Number of Sequences: 438
Number of extensions: 3184
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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