Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27m22
(474 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 152 1e-37
07_01_0578 + 4295386-4296489,4297394-4297507 150 5e-37
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 35 0.029
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.067
03_05_0366 - 23505755-23506441 31 0.47
07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988 30 0.83
02_02_0434 + 10196427-10196606,10197132-10197152,10197816-101978... 30 0.83
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 30 1.1
12_01_0073 + 613316-613447,613611-613802,614067-614232,614460-61... 29 1.4
01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149 29 1.4
07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253 29 2.5
02_04_0457 + 23093020-23093343,23093798-23093806 29 2.5
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 28 4.4
05_03_0419 - 13707843-13707860,13707936-13708010,13708251-137082... 28 4.4
12_02_0488 + 19587337-19587648,19587739-19587798,19587876-195879... 27 5.8
11_06_0209 + 21282079-21282369,21287029-21287137,21287462-212875... 27 5.8
07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312 27 5.8
06_03_0854 + 25400855-25403741,25406174-25407708 27 5.8
11_01_0072 + 570345-570476,570640-570831,571095-571260,571487-57... 27 7.7
09_06_0153 - 21243108-21245660 27 7.7
08_01_0259 + 2123393-2123555,2123670-2124070 27 7.7
05_06_0214 - 26425100-26425922,26426008-26426058,26426183-264262... 27 7.7
04_04_1448 + 33679110-33679140,33679858-33680057,33680163-336802... 27 7.7
02_03_0152 - 15767985-15768317 27 7.7
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 27 7.7
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 152 bits (369), Expect = 1e-37
Identities = 73/107 (68%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
Frame = +3
Query: 99 SVARPLVSVYS-EKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
+ ARPLVSV + E A +P V +APIRPD+V H +S N RQPY VS+ AG
Sbjct: 3 AAARPLVSVKALEGDMATDSAGIQMPQVLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAG 62
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTK 109
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 150 bits (364), Expect = 5e-37
Identities = 72/105 (68%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Frame = +3
Query: 108 RPLVSVYSEKSE--TVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQ 281
RPLVSV + + + T ++ L VF+AP+RPD+V VH +S N RQPY VS+ AGHQ
Sbjct: 6 RPLVSVKALEGDMATDNSSSLALAEVFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQ 65
Query: 282 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
TSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK
Sbjct: 66 TSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTK 110
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 35.1 bits (77), Expect = 0.029
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = -1
Query: 456 LSEVDATVPTPPGASWGRTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 286
LS ++ +P P S+ HH + H + YE+ + H + RQ QY QH
Sbjct: 129 LSHPNSVMPVPGEDSFPLQQNHHQQYQQHHHQQQYEHQNRIHFQHHRQQQQYQQHQH 185
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.067
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +3
Query: 288 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 398
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 0.47
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 174 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 350
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 351 HRSGQGA 371
+ + + A
Sbjct: 168 NDNDEEA 174
>07_03_1678 + 28606656-28606784,28607161-28607352,28607431-28607988
Length = 292
Score = 30.3 bits (65), Expect = 0.83
Identities = 19/52 (36%), Positives = 22/52 (42%)
Frame = +2
Query: 71 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 226
ASL N + P+F V G SQA V + GAH G Q C F
Sbjct: 125 ASLALANSDLPPPSFDVANLTASFAAKGLSQADMVALSGAHTVGQAQ-CQNF 175
>02_02_0434 +
10196427-10196606,10197132-10197152,10197816-10197877,
10198784-10199036
Length = 171
Score = 30.3 bits (65), Expect = 0.83
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 299 GYWTCCRPNSACPWWWYS*VRSGCLR*HVSWWTYVRPHEAPGGVGTVASTSD 454
G+ CC WWW + +R L +S + R H+ GG G V+S D
Sbjct: 3 GHVACCLTRQRATWWWQAALRWTDLIETMS--SSRRRHQQLGGGGGVSSVGD 52
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -1
Query: 366 PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 265
P + +HHHGH + Q H G PP
Sbjct: 33 PQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPP 66
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -1
Query: 363 DRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 265
D +HHH H G H Q QH PP
Sbjct: 32 DPQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPP 64
>12_01_0073 +
613316-613447,613611-613802,614067-614232,614460-614845
Length = 291
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 71 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 226
ASL N I +PTF +G + G S + + GAH G + C F
Sbjct: 126 ASLDTANNDIPAPTFDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>01_03_0008 + 11594061-11594078,11594201-11594285,11594506-11595149
Length = 248
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -1
Query: 459 PLSEVDATVPTPPGASWGRTYVHHDTCYRRHPDRTYEYHH-HGHAEFGRQHVQYPMIQH 286
P +E D PP ++ HD Y T+++HH HGH FGR H +P H
Sbjct: 117 PPAEADQAA-APPATDATVIHMVHDYPY------THDHHHGHGHHLFGRDH--WPASHH 166
>07_03_0706 + 20850634-20850830,20851401-20851576,20851706-20852253
Length = 306
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +3
Query: 297 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAALAPSRQPP 452
W R ++R GGT R+G G GN A T A+APS PP
Sbjct: 184 WFQNRKSRSKNKLRSGGTGRAGLGLGGNRA-SEPPAAATAHREAVAPSFTPP 234
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +3
Query: 273 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 377
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>10_01_0359 +
3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 414 SWGRTYVHHDTCYRRHPDRTYEYHH 340
SWGR H D RR P R+ +HH
Sbjct: 303 SWGRD--HADNRLRRSPSRSSNFHH 325
>05_03_0419 -
13707843-13707860,13707936-13708010,13708251-13708286,
13709718-13709765,13710246-13710326,13710503-13710554,
13710671-13710730,13711266-13711346,13711461-13711577,
13711714-13711754,13711981-13712059,13712136-13712292,
13712586-13712718,13712799-13712926,13715152-13715314
Length = 422
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -2
Query: 290 STGLVTSLLAHAVGLPRVLGHRNVNIIDQVRTD-GRLEHEREGLG 159
+TG+ +L+ + VG+P+VL ++ I Q+ D G +E +RE G
Sbjct: 204 ATGVYKTLVRYLVGVPQVL----LDFIRQINDDNGPMEEQRERYG 244
>12_02_0488 +
19587337-19587648,19587739-19587798,19587876-19587941,
19588017-19588082,19588253-19588345
Length = 198
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 183 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAES 296
K ++ D N++ + SK R VSK H SAES
Sbjct: 80 KRKVQMDTENELMTNRSKEVRTKMSVSKACKHSVSAES 117
>11_06_0209 +
21282079-21282369,21287029-21287137,21287462-21287580,
21287722-21287829,21287943-21288062,21288838-21289011,
21289111-21289212
Length = 340
Score = 27.5 bits (58), Expect = 5.8
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 177 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRA---VARIPRVRGGG 347
VF PIR D+V+ V +K + ++ +Q GTGRA R P+ RGG
Sbjct: 160 VFDVPIRKDIVHRVGTHSTKTISEVSGTGRKPYNQK-----GTGRARHGTLRGPQFRGGA 214
Query: 348 T 350
T
Sbjct: 215 T 215
>07_01_0354 + 2578676-2578753,2578871-2578951,2579070-2579312
Length = 133
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -2
Query: 329 RNSGDSTSSTP*FSTG--LVTSLLAHAVGLPRVLGHRNVNIIDQV 201
R+SG T F+ L + H +G+ VLG +N+ ++DQ+
Sbjct: 87 RDSGLQTGDPAGFTLADTLACGAVGHIMGVGVVLGLKNIGVLDQI 131
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 342 GGTHRSGQGAFGNMCRGGRMFAPTKPLAALAPSRQPPT 455
GG G+G G RGG+ APT + +AP PT
Sbjct: 346 GGGRGLGRGGGGGRGRGGKR-APTTAVTVVAPPPPVPT 382
>11_01_0072 +
570345-570476,570640-570831,571095-571260,571487-571872
Length = 291
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 71 ASLK*RNESIGSPTFSVGVFREE*DGAGCSQAPPVRVQGAHPSGPGQ*CSRF 226
ASL N I +PT +G + G S + + GAH G + C F
Sbjct: 126 ASLDTANNDIPAPTLDLGDLTKSFSNKGLSATDMIALSGAHTIGQAR-CVNF 176
>09_06_0153 - 21243108-21245660
Length = 850
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 157 APCTVSLFSEYTDTKGRATDRLISLL*RSYTSEIYTNSGDK 35
APCTV +F++ +G A+ RL + + S + N GD+
Sbjct: 612 APCTVGVFADRPFWRGGASFRLPTKISTSEETTAARNQGDQ 652
>08_01_0259 + 2123393-2123555,2123670-2124070
Length = 187
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 408 PTKPLAALAPSRQPPTAGKRP 470
P P A+AP+ PPTAG RP
Sbjct: 137 PRTP-TAMAPNAMPPTAGGRP 156
>05_06_0214 -
26425100-26425922,26426008-26426058,26426183-26426256,
26426344-26426441,26426547-26426671,26426724-26426957,
26426992-26427037,26427101-26427152,26427331-26427367,
26427521-26427637,26428287-26428352,26428439-26428518,
26429102-26429311,26429650-26429739,26430093-26430182,
26430280-26430411,26430876-26431094,26431203-26431286,
26431543-26431656,26431857-26431914,26432535-26432602,
26432847-26432962,26433495-26433574,26433839-26433912
Length = 1045
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 162 WLHPAPSHSSLN-TPTLKVGLPIDSF 88
WL P P+H ++N L + +P+D F
Sbjct: 871 WLKPTPAHVAMNPAEALAMQIPVDHF 896
>04_04_1448 +
33679110-33679140,33679858-33680057,33680163-33680272,
33680372-33680591,33680672-33680794,33680892-33680960,
33681915-33682157,33682235-33682297,33682414-33682477,
33682740-33682810
Length = 397
Score = 27.1 bits (57), Expect = 7.7
Identities = 33/123 (26%), Positives = 49/123 (39%)
Frame = +3
Query: 81 SSEMSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCV 260
+S M S RP + SE + Q A + FK ++ D ++ S+ R+ V
Sbjct: 35 ASVMPFSYIRPHGDLESEIHQVEQEAYTGVLRAFK--VQSDAISWEKESLITELRKELRV 92
Query: 261 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAALAPS 440
S + H+ A+ R+ R GG S Q RG R+F T+P A
Sbjct: 93 SDDE-HRELLNKVNEDVAIRRMREFRQGGGSLSAQH------RGSRIFHDTEPGPAAKRQ 145
Query: 441 RQP 449
R P
Sbjct: 146 RTP 148
>02_03_0152 - 15767985-15768317
Length = 110
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Frame = -1
Query: 378 YRRHPDRTYEYHHHGHAEFGRQ----HVQYPMI-QHWFGDQPP 265
YR P HG AEF RQ H +P HW +PP
Sbjct: 19 YRYRPSPMLPELSHGVAEFSRQSTRRHAPWPPSGGHWSSSEPP 61
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 27.1 bits (57), Expect = 7.7
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +3
Query: 297 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP-LAALAPSRQPP 452
W R ++R GGT R+G G GN R AP A+APS PP
Sbjct: 91 WFQNRKSRSKNKLRSGGTGRAGLGLGGN-----RASAPAAAHREAVAPSFTPP 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,063,573
Number of Sequences: 37544
Number of extensions: 325693
Number of successful extensions: 1353
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 967140324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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