Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc27m22
(474 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 180 2e-45
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 180 2e-45
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 180 2e-45
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 180 2e-45
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 180 2e-45
M13149-1|AAA52694.1| 525|Homo sapiens HRG protein. 33 0.51
BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich glycopro... 33 0.51
AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich glycopro... 33 0.51
AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase pro... 31 2.7
AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens ... 31 2.7
BC110614-1|AAI10615.1| 387|Homo sapiens CLEC4M protein protein. 30 4.7
BC038851-1|AAH38851.1| 399|Homo sapiens C-type lectin domain fa... 30 4.7
AY343913-1|AAR04559.1| 353|Homo sapiens L-SIGN variant protein. 30 4.7
AY042240-1|AAK91865.1| 263|Homo sapiens sDC-SIGN2 type III isof... 30 4.7
AY042238-1|AAK91863.1| 332|Homo sapiens sDC-SIGN2 type I isofor... 30 4.7
AY042234-1|AAK91859.1| 399|Homo sapiens mDC-SIGN2 type I isofor... 30 4.7
AF290887-1|AAK20998.1| 376|Homo sapiens L-SIGN protein. 30 4.7
AF245219-1|AAG13848.2| 399|Homo sapiens probable mannose bindin... 30 4.7
AF209481-1|AAG13815.2| 399|Homo sapiens probable mannose bindin... 30 4.7
AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog prot... 29 6.2
AB023216-1|BAA76843.2| 1371|Homo sapiens KIAA0999 protein protein. 29 6.2
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 29 8.2
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 29 8.2
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 29 8.2
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 29 8.2
AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein. 29 8.2
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 29 8.2
AE006463-5|AAK61225.1| 321|Homo sapiens unknown protein. 29 8.2
AB209441-1|BAD92678.1| 879|Homo sapiens fibroblast growth facto... 29 8.2
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 180 bits (439), Expect = 2e-45
Identities = 84/108 (77%), Positives = 94/108 (87%)
Frame = +3
Query: 93 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 272
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 273 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 120
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 180 bits (438), Expect = 2e-45
Identities = 84/107 (78%), Positives = 93/107 (86%)
Frame = +3
Query: 96 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 275
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 276 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 416
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK 106
>M13149-1|AAA52694.1| 525|Homo sapiens HRG protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.51
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 262
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 390 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 262
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>BC069574-1|AAH69574.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.51
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 262
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 390 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 262
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>AB005803-1|BAA21613.1| 525|Homo sapiens histidine-rich
glycoprotein protein.
Length = 525
Score = 33.1 bits (72), Expect = 0.51
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 393 HHDTCYRRHPDRTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 262
HH + H T+ H HGH G H +P H G P C
Sbjct: 364 HHPHAHHPHEHDTHRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC 408
Score = 29.9 bits (64), Expect = 4.7
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 390 HDTCYRRHPD--RTYEYHHHGHAEFGRQ-HVQYPMIQHWFGDQPPC 262
HDT +R+HP + +H HGH G H +P H F D PC
Sbjct: 374 HDT-HRQHPHGHHPHGHHPHGHHPHGHHPHGHHPHC-HDFQDYGPC 417
>AY044449-1|AAK95951.1| 1907|Homo sapiens muscle alpha-kinase
protein.
Length = 1907
Score = 30.7 bits (66), Expect = 2.7
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 225 SMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI-PRVRGGGTHRSGQGAFGNMCRGGR 398
++++ +RQP + AG A +W TG A A P V GG S + GGR
Sbjct: 160 AINRGARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPTRGWGAGGR 218
>AK125767-1|BAC86280.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ43779 fis, clone TESTI2051488. ).
Length = 168
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 429 TPPGAS--WGRTYVHHDTCYRRHPDRTYEYHHHGHAEFG 319
+PPG++ W + HH + +R H + HHH H G
Sbjct: 114 SPPGSTCRWCSCHSHHHSHHRSHHRSHHCSHHHSHHHSG 152
>BC110614-1|AAI10615.1| 387|Homo sapiens CLEC4M protein protein.
Length = 387
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 363 GWNDNRCDVDNYWICKKP-AAC 383
>BC038851-1|AAH38851.1| 399|Homo sapiens C-type lectin domain
family 4, member M protein.
Length = 399
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AY343913-1|AAR04559.1| 353|Homo sapiens L-SIGN variant protein.
Length = 353
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 329 GWNDNRCDVDNYWICKKP-AAC 349
>AY042240-1|AAK91865.1| 263|Homo sapiens sDC-SIGN2 type III isoform
protein.
Length = 263
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 239 GWNDNRCDVDNYWICKKP-AAC 259
>AY042238-1|AAK91863.1| 332|Homo sapiens sDC-SIGN2 type I isoform
protein.
Length = 332
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 308 GWNDNRCDVDNYWICKKP-AAC 328
>AY042234-1|AAK91859.1| 399|Homo sapiens mDC-SIGN2 type I isoform
protein.
Length = 399
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AF290887-1|AAK20998.1| 376|Homo sapiens L-SIGN protein.
Length = 376
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 352 GWNDNRCDVDNYWICKKP-AAC 372
>AF245219-1|AAG13848.2| 399|Homo sapiens probable mannose binding
C-type lectin DC-SIGNR protein.
Length = 399
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AF209481-1|AAG13815.2| 399|Homo sapiens probable mannose binding
C-type lectin DC-SIGNR protein.
Length = 399
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 269 GWSPNQC*IMGYWTCCRPNSAC 334
GW+ N+C + YW C +P +AC
Sbjct: 375 GWNDNRCDVDNYWICKKP-AAC 395
>AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog
protein.
Length = 558
Score = 29.5 bits (63), Expect = 6.2
Identities = 18/74 (24%), Positives = 27/74 (36%), Gaps = 4/74 (5%)
Frame = -1
Query: 471 KAAFPLSEVDATVPTPPGASWGRTYVHHDTCYRRHPDRTYEYHHHGH----AEFGRQHVQ 304
K AF + T P +W H + HP + +HHH H HV+
Sbjct: 350 KEAFGEQPLQLTTK-PDLLAWDPARNTHPPSHHPHPHPHHHHHHHHHHHHAVGLNLSHVR 408
Query: 303 YPMIQHWFGDQPPC 262
+ G++ PC
Sbjct: 409 KRCLSETHGEREPC 422
>AB023216-1|BAA76843.2| 1371|Homo sapiens KIAA0999 protein protein.
Length = 1371
Score = 29.5 bits (63), Expect = 6.2
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Frame = +3
Query: 258 VSKEAGHQTSAESW---GTGR--AVAR-IPRVRGGGTHRSGQGA-FGNMCRGGRMFAPTK 416
VS +G +S+ +W TG A AR IP +RG GA G GR+ P
Sbjct: 22 VSLLSGASSSSLAWCGLATGALGAGARGIPELRGAAGAGGAAGAGTGGAGPAGRLLPPPA 81
Query: 417 PLAALAPSRQPPTAGK-RP 470
P + AP+ P AG+ RP
Sbjct: 82 PGSPAAPAAVSPAAGQPRP 100
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 264 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAAL 431
++ G E W G + P ++ G ++G G C AP++P AL
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPAL 60
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 264 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAAL 431
++ G E W G + P ++ G ++G G C AP++P AL
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPAL 60
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 264 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAAL 431
++ G E W G + P ++ G ++G G C AP++P AL
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPAL 60
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 264 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAAL 431
++ G E W G + P ++ G ++G G C AP++P AL
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPAL 60
>AK123755-1|BAC85688.1| 258|Homo sapiens rCS1a) mRNA. protein.
Length = 258
Score = 29.1 bits (62), Expect = 8.2
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Frame = +3
Query: 234 KNSRQPY-CVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG------NMCRG 392
+ R+P C + + H S +G R PR+ G Q A + R
Sbjct: 49 RTQRRPRSCQAFQGQHPPPVRSLSSGPP--RAPRLSPAGASPGPQSASSRGQRASSPARS 106
Query: 393 GRMFAPTKPLAALAPSRQPPTAGK 464
GR PT P + AP R P T+ +
Sbjct: 107 GRASRPTSPAESTAPPRSPRTSSR 130
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 264 KEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAAL 431
++ G E W G + P ++ G ++G G C AP++P AL
Sbjct: 5 EDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPAL 60
>AE006463-5|AAK61225.1| 321|Homo sapiens unknown protein.
Length = 321
Score = 29.1 bits (62), Expect = 8.2
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 285 SAESWGTGRAVARI-PRVRG-GGTHRSGQGAFGNMCRGGRMFAPTKPLAA-LAPSRQPP 452
+A G G AR P + G G RSG+GA G + APT+PL AP R P
Sbjct: 5 AARRAGPGGGAARGGPHLGGCGSAARSGRGAGRGGAAGAQPPAPTRPLRVDAAPGRLRP 63
>AB209441-1|BAD92678.1| 879|Homo sapiens fibroblast growth factor
receptor 3 isoform 1 precursor variant protein.
Length = 879
Score = 29.1 bits (62), Expect = 8.2
Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +3
Query: 261 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPLAALAPS 440
S+ AG S + T R P RGG R GQ A R P A +P
Sbjct: 3 SRAAGAARSCSAGRTDAPAGRRPEGRGGSWAR-GQRAGAGAARS----EPGSG-ARQSPE 56
Query: 441 RQPPTAGKR--PW 473
R+PP AG R PW
Sbjct: 57 RRPPPAGARAGPW 69
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,860,884
Number of Sequences: 237096
Number of extensions: 1646111
Number of successful extensions: 8679
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 8163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8607
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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